RNA–Protein interactions for RNA: ENST00000637903.1

SPTAN1-238, Transcript of spectrin alpha, non-erythrocytic 1, human

TSL 5

Gene SPTAN1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPTAN1-238	ENST00000637903	CDK5RAP2	Q96SN8	1893 aa		10.13	□□□□□ -0.79
SPTAN1-238	ENST00000637903	FOCAD	Q5VW36	1801 aa		10.12	□□□□□ -0.79
SPTAN1-238	ENST00000637903	HMMR	O75330	724 aa		10.12	□□□□□ -0.79
SPTAN1-238	ENST00000637903	BAG3	O95817	575 aa		10.12	□□□□□ -0.79
SPTAN1-238	ENST00000637903	HMGCR	P04035	888 aa		10.12	□□□□□ -0.79
SPTAN1-238	ENST00000637903	PLCG2	P16885	1265 aa		10.12	□□□□□ -0.79
SPTAN1-238	ENST00000637903	BACE1	P56817	501 aa		10.12	□□□□□ -0.79
SPTAN1-238	ENST00000637903	POLA2	Q14181	598 aa		10.12	□□□□□ -0.79
SPTAN1-238	ENST00000637903	NECAB2	Q7Z6G3	386 aa		10.12	□□□□□ -0.79
SPTAN1-238	ENST00000637903	FOXP4	Q8IVH2	680 aa	Predicted RBP	10.12	□□□□□ -0.79
SPTAN1-238	ENST00000637903	PAWR	Q96IZ0	340 aa	Known RBP	10.12	□□□□□ -0.79
SPTAN1-238	ENST00000637903	ZNF512B	Q96KM6	892 aa	Predicted RBP	10.12	□□□□□ -0.79
SPTAN1-238	ENST00000637903	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	10.12	□□□□□ -0.79
SPTAN1-238	ENST00000637903	MYO5A	Q9Y4I1	1855 aa	Known RBP	10.12	□□□□□ -0.79
SPTAN1-238	ENST00000637903	RPTOR	Q8N122	1335 aa		10.11	□□□□□ -0.79
SPTAN1-238	ENST00000637903	C19orf81	C9J6K1	198 aa		10.11	□□□□□ -0.79
SPTAN1-238	ENST00000637903	CYP2E1	P05181	493 aa	Predicted RBP	10.11	□□□□□ -0.79
SPTAN1-238	ENST00000637903	ASNS	P08243	561 aa		10.11	□□□□□ -0.79
SPTAN1-238	ENST00000637903	MNX1	P50219	401 aa	Predicted RBP	10.11	□□□□□ -0.79
SPTAN1-238	ENST00000637903	JAG1	P78504	1218 aa		10.11	□□□□□ -0.79
SPTAN1-238	ENST00000637903	TNNI3K	Q59H18	835 aa		10.11	□□□□□ -0.79
SPTAN1-238	ENST00000637903	NAA16	Q6N069	864 aa	Predicted RBP	10.11	□□□□□ -0.79
SPTAN1-238	ENST00000637903	SIRT2	Q8IXJ6	389 aa		10.11	□□□□□ -0.79
SPTAN1-238	ENST00000637903	SSH3	Q8TE77	659 aa		10.11	□□□□□ -0.79
SPTAN1-238	ENST00000637903	P2RX7	Q99572	595 aa	Known RBP	10.11	□□□□□ -0.79
SPTAN1-238	ENST00000637903	NOL10	Q9BSC4	688 aa	Known RBP	10.11	□□□□□ -0.79
SPTAN1-238	ENST00000637903	DNAJC18	Q9H819	358 aa		10.11	□□□□□ -0.79
SPTAN1-238	ENST00000637903	HMX1	Q9NP08	348 aa	Predicted RBP	10.11	□□□□□ -0.79
SPTAN1-238	ENST00000637903	PPP4R2	Q9NY27	417 aa		10.11	□□□□□ -0.79
SPTAN1-238	ENST00000637903	AATF	Q9NY61	560 aa	Known RBP eCLIP	10.11	□□□□□ -0.79
SPTAN1-238	ENST00000637903	TAOK2	Q9UL54	1235 aa		10.11	□□□□□ -0.79
SPTAN1-238	ENST00000637903	FPGT-TNNI3K	V9GXZ4	949 aa		10.11	□□□□□ -0.79
SPTAN1-238	ENST00000637903	XRCC5	P13010	732 aa	Known RBP	10.1	□□□□□ -0.79
SPTAN1-238	ENST00000637903	BMP8B	P34820	402 aa		10.1	□□□□□ -0.79
SPTAN1-238	ENST00000637903	TRIM32	Q13049	653 aa		10.1	□□□□□ -0.79
SPTAN1-238	ENST00000637903	HDAC1	Q13547	482 aa	Predicted RBP	10.1	□□□□□ -0.79
SPTAN1-238	ENST00000637903	MTMR2	Q13614	643 aa		10.1	□□□□□ -0.79
SPTAN1-238	ENST00000637903	CCDC158	Q5M9N0	1113 aa		10.1	□□□□□ -0.79
SPTAN1-238	ENST00000637903	TTC39A	Q5SRH9	613 aa		10.1	□□□□□ -0.79
SPTAN1-238	ENST00000637903	MAP3K21	Q5TCX8	1036 aa		10.1	□□□□□ -0.79
SPTAN1-238	ENST00000637903	ADGRA1	Q86SQ6	560 aa		10.1	□□□□□ -0.79
SPTAN1-238	ENST00000637903	DIS3L	Q8TF46	1054 aa	Known RBP	10.1	□□□□□ -0.79
SPTAN1-238	ENST00000637903	TGFBRAP1	Q8WUH2	860 aa		10.1	□□□□□ -0.79
SPTAN1-238	ENST00000637903	DBNDD2	Q9BQY9	259 aa		10.1	□□□□□ -0.79
SPTAN1-238	ENST00000637903	RWDD1	Q9H446	243 aa	Predicted RBP	10.1	□□□□□ -0.79
SPTAN1-238	ENST00000637903	SNRK	Q9NRH2	765 aa		10.1	□□□□□ -0.79
SPTAN1-238	ENST00000637903	STAP2	Q9UGK3	403 aa		10.1	□□□□□ -0.79
SPTAN1-238	ENST00000637903	OGDHL	Q9ULD0	1010 aa		10.1	□□□□□ -0.79
SPTAN1-238	ENST00000637903	GTF3C3	Q9Y5Q9	886 aa		10.1	□□□□□ -0.79
SPTAN1-238	ENST00000637903	MAST2	Q6P0Q8	1798 aa		10.1	□□□□□ -0.79
SPTAN1-238	ENST00000637903	COL6A3	P12111	3177 aa		10.1	□□□□□ -0.79
SPTAN1-238	ENST00000637903	FLT1	P17948	1338 aa		10.09	□□□□□ -0.79
SPTAN1-238	ENST00000637903	USP17L10	C9JJH3	530 aa		10.09	□□□□□ -0.79
SPTAN1-238	ENST00000637903	HERVK_113	P62684	666 aa		10.09	□□□□□ -0.79
SPTAN1-238	ENST00000637903	IRX3	P78415	501 aa	Predicted RBP	10.09	□□□□□ -0.79
SPTAN1-238	ENST00000637903	SHROOM1	Q2M3G4	852 aa	Predicted RBP	10.09	□□□□□ -0.79
SPTAN1-238	ENST00000637903	MAPKAPK5	Q8IW41	473 aa		10.09	□□□□□ -0.79
SPTAN1-238	ENST00000637903	TRMT44	Q8IYL2	757 aa	Known RBP	10.09	□□□□□ -0.79
SPTAN1-238	ENST00000637903	GPRC5A	Q8NFJ5	357 aa		10.09	□□□□□ -0.79
SPTAN1-238	ENST00000637903	TRIB2	Q92519	343 aa		10.09	□□□□□ -0.79
SPTAN1-238	ENST00000637903	USP6NL	Q92738	828 aa		10.09	□□□□□ -0.79
SPTAN1-238	ENST00000637903	GDF15	Q99988	308 aa		10.09	□□□□□ -0.79
SPTAN1-238	ENST00000637903	NUDT12	Q9BQG2	462 aa		10.09	□□□□□ -0.79
SPTAN1-238	ENST00000637903	NBPF3	Q9H094	633 aa		10.09	□□□□□ -0.79
SPTAN1-238	ENST00000637903	TXNRD2	Q9NNW7	524 aa		10.09	□□□□□ -0.79
SPTAN1-238	ENST00000637903	TMOD4	Q9NZQ9	345 aa		10.09	□□□□□ -0.79
SPTAN1-238	ENST00000637903	RBPJL	Q9UBG7	517 aa		10.09	□□□□□ -0.79
SPTAN1-238	ENST00000637903	PALD1	Q9ULE6	856 aa		10.09	□□□□□ -0.79
SPTAN1-238	ENST00000637903	NOP58	Q9Y2X3	529 aa	Known RBP	10.09	□□□□□ -0.79
SPTAN1-238	ENST00000637903	MYH1	P12882	1939 aa		10.08	□□□□□ -0.8
SPTAN1-238	ENST00000637903	SOX1	O00570	391 aa	Predicted RBP	10.08	□□□□□ -0.8
SPTAN1-238	ENST00000637903	IGHD	P01880	384 aa		10.08	□□□□□ -0.8
SPTAN1-238	ENST00000637903	MAPK4	P31152	587 aa		10.08	□□□□□ -0.8
SPTAN1-238	ENST00000637903	ZAP70	P43403	619 aa		10.08	□□□□□ -0.8
SPTAN1-238	ENST00000637903		Q3C1V9	767 aa		10.08	□□□□□ -0.8
SPTAN1-238	ENST00000637903	MORN1	Q5T089	497 aa		10.08	□□□□□ -0.8
SPTAN1-238	ENST00000637903	POTEE	Q6S8J3	1075 aa		10.08	□□□□□ -0.8
SPTAN1-238	ENST00000637903	GTF3C2	Q8WUA4	911 aa	Predicted RBP	10.08	□□□□□ -0.8
SPTAN1-238	ENST00000637903	SOCS4	Q8WXH5	440 aa		10.08	□□□□□ -0.8
SPTAN1-238	ENST00000637903	CCDC136	Q96JN2	1154 aa		10.08	□□□□□ -0.8
SPTAN1-238	ENST00000637903	PIH1D3	Q9NQM4	214 aa	Known RBP	10.08	□□□□□ -0.8
SPTAN1-238	ENST00000637903	EMILIN3	Q9NT22	766 aa		10.08	□□□□□ -0.8
SPTAN1-238	ENST00000637903	ZBTB21	Q9ULJ3	1066 aa		10.08	□□□□□ -0.8
SPTAN1-238	ENST00000637903	PEX10	O60683	326 aa		10.07	□□□□□ -0.8
SPTAN1-238	ENST00000637903	SURF6	O75683	361 aa	Known RBP	10.07	□□□□□ -0.8
SPTAN1-238	ENST00000637903	GDF11	O95390	407 aa		10.07	□□□□□ -0.8
SPTAN1-238	ENST00000637903	CYP2B6	P20813	491 aa		10.07	□□□□□ -0.8
SPTAN1-238	ENST00000637903	ERVK-9	P63128	1117 aa		10.07	□□□□□ -0.8
SPTAN1-238	ENST00000637903	ERVK-24	P63145	666 aa		10.07	□□□□□ -0.8
SPTAN1-238	ENST00000637903	DYNLL1	P63167	89 aa	Known RBP	10.07	□□□□□ -0.8
SPTAN1-238	ENST00000637903	B4GALNT3	Q6L9W6	998 aa		10.07	□□□□□ -0.8
SPTAN1-238	ENST00000637903	GPR153	Q6NV75	609 aa		10.07	□□□□□ -0.8
SPTAN1-238	ENST00000637903	TATDN1	Q6P1N9	297 aa		10.07	□□□□□ -0.8
SPTAN1-238	ENST00000637903	USP17L2	Q6R6M4	530 aa		10.07	□□□□□ -0.8
SPTAN1-238	ENST00000637903	CERS3	Q8IU89	383 aa		10.07	□□□□□ -0.8
SPTAN1-238	ENST00000637903	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	10.07	□□□□□ -0.8
SPTAN1-238	ENST00000637903	C12orf42	Q96LP6	360 aa		10.07	□□□□□ -0.8
SPTAN1-238	ENST00000637903	C11orf49	Q9H6J7	331 aa		10.07	□□□□□ -0.8
SPTAN1-238	ENST00000637903	DCTPP1	Q9H773	170 aa		10.07	□□□□□ -0.8
SPTAN1-238	ENST00000637903	DBNL	Q9UJU6	430 aa	Known RBP	10.07	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 56 ms