RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 BAG3O95817 575 aa9.55□□□□□ -0.88
PNKP-229ENST00000637897 MTMR2Q13614 643 aa9.55□□□□□ -0.88
PNKP-229ENST00000637897 FASTKD5Q7L8L6 764 aaKnown RBP9.55□□□□□ -0.88
PNKP-229ENST00000637897 UBE2Q1Q7Z7E8 422 aa9.55□□□□□ -0.88
PNKP-229ENST00000637897 FOXP4Q8IVH2 680 aaPredicted RBP9.55□□□□□ -0.88
PNKP-229ENST00000637897 PROCA1Q8NCQ7 364 aaPredicted RBP9.55□□□□□ -0.88
PNKP-229ENST00000637897 ACER1Q8TDN7 264 aa9.55□□□□□ -0.88
PNKP-229ENST00000637897 ASCC2Q9H1I8 757 aaPredicted RBP9.55□□□□□ -0.88
PNKP-229ENST00000637897 GJD2Q9UKL4 321 aa9.55□□□□□ -0.88
PNKP-229ENST00000637897 ZBTB21Q9ULJ3 1066 aa9.55□□□□□ -0.88
PNKP-229ENST00000637897 RAB11FIP3O75154 756 aa9.54□□□□□ -0.88
PNKP-229ENST00000637897 GH2P01242 217 aa9.54□□□□□ -0.88
PNKP-229ENST00000637897 PLCG2P16885 1265 aa9.54□□□□□ -0.88
PNKP-229ENST00000637897 ATP5JP18859 108 aa9.54□□□□□ -0.88
PNKP-229ENST00000637897 ADD2P35612 726 aa9.54□□□□□ -0.88
PNKP-229ENST00000637897 BACE1P56817 501 aa9.54□□□□□ -0.88
PNKP-229ENST00000637897 Q3C1V9 767 aa9.54□□□□□ -0.88
PNKP-229ENST00000637897 SLC9C1Q4G0N8 1177 aa9.54□□□□□ -0.88
PNKP-229ENST00000637897 KIAA1755Q5JYT7 1200 aa9.54□□□□□ -0.88
PNKP-229ENST00000637897 SLC9C2Q5TAH2 1124 aa9.54□□□□□ -0.88
PNKP-229ENST00000637897 TSHZ3Q63HK5 1081 aa9.54□□□□□ -0.88
PNKP-229ENST00000637897 SIAH1Q8IUQ4 282 aa9.54□□□□□ -0.88
PNKP-229ENST00000637897 ANKRD13CQ8N6S4 541 aa9.54□□□□□ -0.88
PNKP-229ENST00000637897 SLC44A5Q8NCS7 719 aa9.54□□□□□ -0.88
PNKP-229ENST00000637897 OTUD7AQ8TE49 926 aaPredicted RBP9.54□□□□□ -0.88
PNKP-229ENST00000637897 SDR42E1Q8WUS8 393 aa9.54□□□□□ -0.88
PNKP-229ENST00000637897 P2RX7Q99572 595 aaKnown RBP9.54□□□□□ -0.88
PNKP-229ENST00000637897 HAUS7Q99871 368 aa9.54□□□□□ -0.88
PNKP-229ENST00000637897 DCTPP1Q9H773 170 aa9.54□□□□□ -0.88
PNKP-229ENST00000637897 DCP1AQ9NPI6 582 aaPredicted RBP9.54□□□□□ -0.88
PNKP-229ENST00000637897 MYPNQ86TC9 1320 aa9.54□□□□□ -0.88
PNKP-229ENST00000637897 NAV1Q8NEY1 1877 aa9.53□□□□□ -0.88
PNKP-229ENST00000637897 RLFQ13129 1914 aa9.53□□□□□ -0.88
PNKP-229ENST00000637897 BAZ2AQ9UIF9 1905 aaKnown RBP9.53□□□□□ -0.88
PNKP-229ENST00000637897 CEP290O15078 2479 aa9.53□□□□□ -0.88
PNKP-229ENST00000637897 CYP2D7A0A087X1C5 515 aa9.53□□□□□ -0.88
PNKP-229ENST00000637897 A0A1W2PRG0 241 aa9.53□□□□□ -0.88
PNKP-229ENST00000637897 CNMDO75829 334 aa9.53□□□□□ -0.88
PNKP-229ENST00000637897 GNRH1P01148 92 aa9.53□□□□□ -0.88
PNKP-229ENST00000637897 MS4A1P11836 297 aa9.53□□□□□ -0.88
PNKP-229ENST00000637897 HOXA7P31268 230 aaPredicted RBP9.53□□□□□ -0.88
PNKP-229ENST00000637897 FLT3LGP49771 235 aa9.53□□□□□ -0.88
PNKP-229ENST00000637897 MAP3K12Q12852 859 aa9.53□□□□□ -0.88
PNKP-229ENST00000637897 HSP90AB4PQ58FF6 505 aa9.53□□□□□ -0.88
PNKP-229ENST00000637897 CLASRPQ8N2M8 674 aaKnown RBP9.53□□□□□ -0.88
PNKP-229ENST00000637897 DNAJC2Q99543 621 aaKnown RBP9.53□□□□□ -0.88
PNKP-229ENST00000637897 EHD4Q9H223 541 aa9.53□□□□□ -0.88
PNKP-229ENST00000637897 ARMT1Q9H993 441 aa9.53□□□□□ -0.88
PNKP-229ENST00000637897 RBPJLQ9UBG7 517 aa9.53□□□□□ -0.88
PNKP-229ENST00000637897 MAGEB6P1A0A0J9YX57 407 aa9.52□□□□□ -0.89
PNKP-229ENST00000637897 FMNL1O95466 1100 aaPredicted RBP9.52□□□□□ -0.89
PNKP-229ENST00000637897 ASNSP08243 561 aa9.52□□□□□ -0.89
PNKP-229ENST00000637897 ELNP15502 786 aa9.52□□□□□ -0.89
PNKP-229ENST00000637897 GRK4P32298 578 aa9.52□□□□□ -0.89
PNKP-229ENST00000637897 TRIM32Q13049 653 aa9.52□□□□□ -0.89
PNKP-229ENST00000637897 FAM110CQ1W6H9 321 aa9.52□□□□□ -0.89
PNKP-229ENST00000637897 DYNLL2Q96FJ2 89 aa9.52□□□□□ -0.89
PNKP-229ENST00000637897 PUS7LQ9H0K6 701 aaKnown RBP9.52□□□□□ -0.89
PNKP-229ENST00000637897 BCL11AQ9H165 835 aa9.52□□□□□ -0.89
PNKP-229ENST00000637897 PAG1Q9NWQ8 432 aa9.52□□□□□ -0.89
PNKP-229ENST00000637897 MORF4L1Q9UBU8 362 aa9.52□□□□□ -0.89
PNKP-229ENST00000637897 SALL3Q9BXA9 1300 aa9.52□□□□□ -0.89
PNKP-229ENST00000637897 RANBP2P49792 3224 aaKnown RBP9.51□□□□□ -0.89
PNKP-229ENST00000637897 MYH7P12883 1935 aa9.51□□□□□ -0.89
PNKP-229ENST00000637897 HMMRO75330 724 aa9.51□□□□□ -0.89
PNKP-229ENST00000637897 IFIT2P09913 472 aaKnown RBP9.51□□□□□ -0.89
PNKP-229ENST00000637897 USP5P45974 858 aa9.51□□□□□ -0.89
PNKP-229ENST00000637897 MNX1P50219 401 aaPredicted RBP9.51□□□□□ -0.89
PNKP-229ENST00000637897 PRMT2P55345 433 aa9.51□□□□□ -0.89
PNKP-229ENST00000637897 FCGRTP55899 365 aa9.51□□□□□ -0.89
PNKP-229ENST00000637897 KIF22Q14807 665 aa9.51□□□□□ -0.89
PNKP-229ENST00000637897 PRPF38BQ5VTL8 546 aaKnown RBP9.51□□□□□ -0.89
PNKP-229ENST00000637897 CLEC10AQ8IUN9 316 aa9.51□□□□□ -0.89
PNKP-229ENST00000637897 USP6NLQ92738 828 aa9.51□□□□□ -0.89
PNKP-229ENST00000637897 C12orf42Q96LP6 360 aa9.51□□□□□ -0.89
PNKP-229ENST00000637897 NOL10Q9BSC4 688 aaKnown RBP9.51□□□□□ -0.89
PNKP-229ENST00000637897 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.51□□□□□ -0.89
PNKP-229ENST00000637897 UNC93B1Q9H1C4 597 aa9.51□□□□□ -0.89
PNKP-229ENST00000637897 PORCNQ9H237 461 aa9.51□□□□□ -0.89
PNKP-229ENST00000637897 SERPINB13Q9UIV8 391 aa9.51□□□□□ -0.89
PNKP-229ENST00000637897 USP17L10C9JJH3 530 aa9.5□□□□□ -0.89
PNKP-229ENST00000637897 MBD4O95243 580 aa9.5□□□□□ -0.89
PNKP-229ENST00000637897 CCL5P13501 91 aa9.5□□□□□ -0.89
PNKP-229ENST00000637897 HERVK_113P62684 666 aa9.5□□□□□ -0.89
PNKP-229ENST00000637897 IRF5Q13568 498 aa9.5□□□□□ -0.89
PNKP-229ENST00000637897 SEPT2Q15019 361 aa9.5□□□□□ -0.89
PNKP-229ENST00000637897 TTF1Q15361 905 aaPredicted RBP9.5□□□□□ -0.89
PNKP-229ENST00000637897 CRACR2BQ8N4Y2 399 aaPredicted RBP9.5□□□□□ -0.89
PNKP-229ENST00000637897 PI4K2BQ8TCG2 481 aa9.5□□□□□ -0.89
PNKP-229ENST00000637897 SMCR8Q8TEV9 937 aaPredicted RBP9.5□□□□□ -0.89
PNKP-229ENST00000637897 OSBP2Q969R2 916 aa9.5□□□□□ -0.89
PNKP-229ENST00000637897 CCDC136Q96JN2 1154 aa9.5□□□□□ -0.89
PNKP-229ENST00000637897 TBC1D2Q9BYX2 928 aa9.5□□□□□ -0.89
PNKP-229ENST00000637897 LRRCC1Q9C099 1032 aa9.5□□□□□ -0.89
PNKP-229ENST00000637897 GINM1Q9NU53 330 aa9.5□□□□□ -0.89
PNKP-229ENST00000637897 ALPK3Q96L96 1907 aa9.49□□□□□ -0.89
PNKP-229ENST00000637897 C19orf81C9J6K1 198 aa9.49□□□□□ -0.89
PNKP-229ENST00000637897 FOXP2O15409 715 aa9.49□□□□□ -0.89
PNKP-229ENST00000637897 ADCY3O60266 1144 aa9.49□□□□□ -0.89
PNKP-229ENST00000637897 IGHA2P01877 340 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms