RNA–Protein interactions for RNA: ENST00000637594.1

CLN8-214, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 406 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-214ENST00000637594 ZKSCAN2Q63HK3 967 aa10.79□□□□□ -0.68
CLN8-214ENST00000637594 GPR153Q6NV75 609 aa10.79□□□□□ -0.68
CLN8-214ENST00000637594 TATDN1Q6P1N9 297 aa10.79□□□□□ -0.68
CLN8-214ENST00000637594 ADGRA1Q86SQ6 560 aa10.79□□□□□ -0.68
CLN8-214ENST00000637594 GDF15Q99988 308 aa10.79□□□□□ -0.68
CLN8-214ENST00000637594 DBNDD2Q9BQY9 259 aa10.79□□□□□ -0.68
CLN8-214ENST00000637594 NBPF3Q9H094 633 aa10.79□□□□□ -0.68
CLN8-214ENST00000637594 TXNRD2Q9NNW7 524 aa10.79□□□□□ -0.68
CLN8-214ENST00000637594 SNRKQ9NRH2 765 aa10.79□□□□□ -0.68
CLN8-214ENST00000637594 PALD1Q9ULE6 856 aa10.79□□□□□ -0.68
CLN8-214ENST00000637594 TNNQ9UQP3 1299 aa10.79□□□□□ -0.68
CLN8-214ENST00000637594 FLT1P17948 1338 aa10.79□□□□□ -0.68
CLN8-214ENST00000637594 LOC285556D6RIA3 1793 aa10.78□□□□□ -0.68
CLN8-214ENST00000637594 ZAP70P43403 619 aa10.78□□□□□ -0.68
CLN8-214ENST00000637594 IRX3P78415 501 aaPredicted RBP10.78□□□□□ -0.68
CLN8-214ENST00000637594 Q3C1V9 767 aa10.78□□□□□ -0.68
CLN8-214ENST00000637594 POTEEQ6S8J3 1075 aa10.78□□□□□ -0.68
CLN8-214ENST00000637594 MAPKAPK5Q8IW41 473 aa10.78□□□□□ -0.68
CLN8-214ENST00000637594 TMEM57Q8N5G2 664 aa10.78□□□□□ -0.68
CLN8-214ENST00000637594 SOCS4Q8WXH5 440 aa10.78□□□□□ -0.68
CLN8-214ENST00000637594 TRIB2Q92519 343 aa10.78□□□□□ -0.68
CLN8-214ENST00000637594 FRAT1Q92837 279 aaPredicted RBP10.78□□□□□ -0.68
CLN8-214ENST00000637594 CLUAP1Q96AJ1 413 aa10.78□□□□□ -0.68
CLN8-214ENST00000637594 C12orf42Q96LP6 360 aa10.78□□□□□ -0.68
CLN8-214ENST00000637594 NUDT12Q9BQG2 462 aa10.78□□□□□ -0.68
CLN8-214ENST00000637594 EMILIN3Q9NT22 766 aa10.78□□□□□ -0.68
CLN8-214ENST00000637594 STAP2Q9UGK3 403 aa10.78□□□□□ -0.68
CLN8-214ENST00000637594 TAOK2Q9UL54 1235 aa10.78□□□□□ -0.68
CLN8-214ENST00000637594 RANBP2P49792 3224 aaKnown RBP10.77□□□□□ -0.68
CLN8-214ENST00000637594 DOCK3Q8IZD9 2030 aa10.77□□□□□ -0.68
CLN8-214ENST00000637594 SURF6O75683 361 aaKnown RBP10.77□□□□□ -0.69
CLN8-214ENST00000637594 TRIM32Q13049 653 aa10.77□□□□□ -0.69
CLN8-214ENST00000637594 MORN1Q5T089 497 aa10.77□□□□□ -0.69
CLN8-214ENST00000637594 USP17L2Q6R6M4 530 aa10.77□□□□□ -0.69
CLN8-214ENST00000637594 DIS3LQ8TF46 1054 aaKnown RBP10.77□□□□□ -0.69
CLN8-214ENST00000637594 EHD4Q9H223 541 aa10.77□□□□□ -0.69
CLN8-214ENST00000637594 PIH1D3Q9NQM4 214 aaKnown RBP10.77□□□□□ -0.69
CLN8-214ENST00000637594 ZBTB21Q9ULJ3 1066 aa10.77□□□□□ -0.69
CLN8-214ENST00000637594 HLA-DOAP06340 250 aa10.76□□□□□ -0.69
CLN8-214ENST00000637594 COL6A1P12109 1028 aa10.76□□□□□ -0.69
CLN8-214ENST00000637594 CYP2B6P20813 491 aa10.76□□□□□ -0.69
CLN8-214ENST00000637594 ERVK-9P63128 1117 aa10.76□□□□□ -0.69
CLN8-214ENST00000637594 ERVK-24P63145 666 aa10.76□□□□□ -0.69
CLN8-214ENST00000637594 LHX8Q68G74 356 aa10.76□□□□□ -0.69
CLN8-214ENST00000637594 LBX2Q6XYB7 198 aa10.76□□□□□ -0.69
CLN8-214ENST00000637594 CRACR2BQ8N4Y2 399 aaPredicted RBP10.76□□□□□ -0.69
CLN8-214ENST00000637594 EAF2Q96CJ1 260 aaPredicted RBP10.76□□□□□ -0.69
CLN8-214ENST00000637594 TRIM34Q9BYJ4 488 aa10.76□□□□□ -0.69
CLN8-214ENST00000637594 C11orf49Q9H6J7 331 aa10.76□□□□□ -0.69
CLN8-214ENST00000637594 DBNLQ9UJU6 430 aaKnown RBP10.76□□□□□ -0.69
CLN8-214ENST00000637594 RABGAP1Q9Y3P9 1069 aa10.76□□□□□ -0.69
CLN8-214ENST00000637594 USP17L15C9J2P7 530 aa10.75□□□□□ -0.69
CLN8-214ENST00000637594 USP17L13C9JLJ4 530 aa10.75□□□□□ -0.69
CLN8-214ENST00000637594 USP17L11C9JVI0 530 aa10.75□□□□□ -0.69
CLN8-214ENST00000637594 USP17L18D6R9N7 530 aa10.75□□□□□ -0.69
CLN8-214ENST00000637594 USP17L22D6RA61 530 aa10.75□□□□□ -0.69
CLN8-214ENST00000637594 USP17L17D6RBQ6 530 aa10.75□□□□□ -0.69
CLN8-214ENST00000637594 USP17L19D6RCP7 530 aa10.75□□□□□ -0.69
CLN8-214ENST00000637594 USP17L20D6RJB6 530 aa10.75□□□□□ -0.69
CLN8-214ENST00000637594 SOX1O00570 391 aaPredicted RBP10.75□□□□□ -0.69
CLN8-214ENST00000637594 CYP7A1P22680 504 aa10.75□□□□□ -0.69
CLN8-214ENST00000637594 RGS2P41220 211 aa10.75□□□□□ -0.69
CLN8-214ENST00000637594 USP14P54578 494 aa10.75□□□□□ -0.69
CLN8-214ENST00000637594 DYNLL1P63167 89 aaKnown RBP10.75□□□□□ -0.69
CLN8-214ENST00000637594 CACNB2Q08289 660 aaPredicted RBP10.75□□□□□ -0.69
CLN8-214ENST00000637594 USP17L24Q0WX57 530 aa10.75□□□□□ -0.69
CLN8-214ENST00000637594 OS9Q13438 667 aaPredicted RBP10.75□□□□□ -0.69
CLN8-214ENST00000637594 SHROOM1Q2M3G4 852 aaPredicted RBP10.75□□□□□ -0.69
CLN8-214ENST00000637594 LRIT3Q3SXY7 679 aa10.75□□□□□ -0.69
CLN8-214ENST00000637594 CATSPERGQ6ZRH7 1159 aa10.75□□□□□ -0.69
CLN8-214ENST00000637594 GPR142Q7Z601 462 aa10.75□□□□□ -0.69
CLN8-214ENST00000637594 PLEKHH3Q7Z736 793 aa10.75□□□□□ -0.69
CLN8-214ENST00000637594 TTC6Q86TZ1 520 aa10.75□□□□□ -0.69
CLN8-214ENST00000637594 KIAA1683Q9H0B3 1180 aa10.75□□□□□ -0.69
CLN8-214ENST00000637594 SERPINB13Q9UIV8 391 aa10.75□□□□□ -0.69
CLN8-214ENST00000637594 TRIOBPQ9H2D6 2365 aa10.75□□□□□ -0.69
CLN8-214ENST00000637594 CEP290O15078 2479 aa10.75□□□□□ -0.69
CLN8-214ENST00000637594 PEX10O60683 326 aa10.74□□□□□ -0.69
CLN8-214ENST00000637594 CNMDO75829 334 aa10.74□□□□□ -0.69
CLN8-214ENST00000637594 GDF11O95390 407 aa10.74□□□□□ -0.69
CLN8-214ENST00000637594 GH2P01242 217 aa10.74□□□□□ -0.69
CLN8-214ENST00000637594 IGHA2P01877 340 aa10.74□□□□□ -0.69
CLN8-214ENST00000637594 PRKAR2AP13861 404 aaKnown RBP10.74□□□□□ -0.69
CLN8-214ENST00000637594 PDE3AQ14432 1141 aa10.74□□□□□ -0.69
CLN8-214ENST00000637594 EDC3Q96F86 508 aaKnown RBP10.74□□□□□ -0.69
CLN8-214ENST00000637594 CCDC8Q9H0W5 538 aaPredicted RBP10.74□□□□□ -0.69
CLN8-214ENST00000637594 PORCNQ9H237 461 aa10.74□□□□□ -0.69
CLN8-214ENST00000637594 SAP30BPQ9UHR5 308 aaKnown RBP10.74□□□□□ -0.69
CLN8-214ENST00000637594 PLXNB2O15031 1838 aa10.74□□□□□ -0.69
CLN8-214ENST00000637594 SIPA1L1O43166 1804 aa10.73□□□□□ -0.69
CLN8-214ENST00000637594 SLC15A5A6NIM6 579 aa10.73□□□□□ -0.69
CLN8-214ENST00000637594 GLRX3O76003 335 aaKnown RBP10.73□□□□□ -0.69
CLN8-214ENST00000637594 HOXC6P09630 235 aa10.73□□□□□ -0.69
CLN8-214ENST00000637594 ZKSCAN1P17029 563 aaPredicted RBP10.73□□□□□ -0.69
CLN8-214ENST00000637594 CCNA1P78396 465 aa10.73□□□□□ -0.69
CLN8-214ENST00000637594 MAP3K12Q12852 859 aa10.73□□□□□ -0.69
CLN8-214ENST00000637594 MAP2K5Q13163 448 aa10.73□□□□□ -0.69
CLN8-214ENST00000637594 CERKLQ49MI3 558 aaPredicted RBP10.73□□□□□ -0.69
CLN8-214ENST00000637594 ERC1Q8IUD2 1116 aa10.73□□□□□ -0.69
CLN8-214ENST00000637594 C7orf61Q8IZ16 206 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms