RNA–Protein interactions for RNA: ENST00000637285.1

SCN1A-215, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 100 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-215ENST00000637285 GRM2Q14416 872 aa3.22□□□□□ -1.89
SCN1A-215ENST00000637285 CCDC74AQ96AQ1 378 aa3.22□□□□□ -1.89
SCN1A-215ENST00000637285 PBXIP1Q96AQ6 731 aa3.22□□□□□ -1.89
SCN1A-215ENST00000637285 BORCS6Q96GS4 357 aa3.22□□□□□ -1.89
SCN1A-215ENST00000637285 MIPEPQ99797 713 aa3.22□□□□□ -1.89
SCN1A-215ENST00000637285 BRPF3Q9ULD4 1205 aa3.22□□□□□ -1.89
SCN1A-215ENST00000637285 ST14Q9Y5Y6 855 aa3.22□□□□□ -1.89
SCN1A-215ENST00000637285 CAPN6Q9Y6Q1 641 aa3.22□□□□□ -1.89
SCN1A-215ENST00000637285 OTOL1A6NHN0 477 aaPredicted RBP3.21□□□□□ -1.9
SCN1A-215ENST00000637285 FANCGO15287 622 aa3.21□□□□□ -1.9
SCN1A-215ENST00000637285 LRIG2O94898 1065 aa3.21□□□□□ -1.9
SCN1A-215ENST00000637285 PDE6BP35913 854 aa3.21□□□□□ -1.9
SCN1A-215ENST00000637285 SSPNQ14714 243 aa3.21□□□□□ -1.9
SCN1A-215ENST00000637285 ZBTB37Q5TC79 503 aa3.21□□□□□ -1.9
SCN1A-215ENST00000637285 ERICH6BQ5W0A0 696 aa3.21□□□□□ -1.9
SCN1A-215ENST00000637285 THAP5Q7Z6K1 395 aa3.21□□□□□ -1.9
SCN1A-215ENST00000637285 CREG2Q8IUH2 290 aa3.21□□□□□ -1.9
SCN1A-215ENST00000637285 ZDHHC14Q8IZN3 488 aa3.21□□□□□ -1.9
SCN1A-215ENST00000637285 FEZF2Q8TBJ5 459 aa3.21□□□□□ -1.9
SCN1A-215ENST00000637285 EMILIN2Q9BXX0 1053 aa3.21□□□□□ -1.9
SCN1A-215ENST00000637285 XYLT2Q9H1B5 865 aa3.21□□□□□ -1.9
SCN1A-215ENST00000637285 MTMR7Q9Y216 660 aa3.21□□□□□ -1.9
SCN1A-215ENST00000637285 AKAP2Q9Y2D5 859 aa3.21□□□□□ -1.9
SCN1A-215ENST00000637285 SEMA7AO75326 666 aa3.2□□□□□ -1.9
SCN1A-215ENST00000637285 ESR1P03372 595 aa3.2□□□□□ -1.9
SCN1A-215ENST00000637285 NME2P22392 152 aa3.2□□□□□ -1.9
SCN1A-215ENST00000637285 SSFA2P28290 1259 aa3.2□□□□□ -1.9
SCN1A-215ENST00000637285 ZXDCQ2QGD7 858 aaPredicted RBP3.2□□□□□ -1.9
SCN1A-215ENST00000637285 C22orf34Q6ZV56 151 aa3.2□□□□□ -1.9
SCN1A-215ENST00000637285 IRF2BP1Q8IU81 584 aa3.2□□□□□ -1.9
SCN1A-215ENST00000637285 TMEM151BQ8IW70 566 aa3.2□□□□□ -1.9
SCN1A-215ENST00000637285 KCT2Q8NC54 265 aa3.2□□□□□ -1.9
SCN1A-215ENST00000637285 RIN3Q8TB24 985 aa3.2□□□□□ -1.9
SCN1A-215ENST00000637285 ZNF507Q8TCN5 953 aa3.2□□□□□ -1.9
SCN1A-215ENST00000637285 EPS8L3Q8TE67 593 aaKnown RBP3.2□□□□□ -1.9
SCN1A-215ENST00000637285 SLC6A17Q9H1V8 727 aa3.2□□□□□ -1.9
SCN1A-215ENST00000637285 PPP4R2Q9NY27 417 aa3.2□□□□□ -1.9
SCN1A-215ENST00000637285 TEX51A0A1B0GUA7 166 aa3.19□□□□□ -1.9
SCN1A-215ENST00000637285 WASH4PA8MWX3 477 aa3.19□□□□□ -1.9
SCN1A-215ENST00000637285 EIF1AYO14602 144 aaKnown RBP3.19□□□□□ -1.9
SCN1A-215ENST00000637285 PEX10O60683 326 aa3.19□□□□□ -1.9
SCN1A-215ENST00000637285 INSRRP14616 1297 aa3.19□□□□□ -1.9
SCN1A-215ENST00000637285 PI3P19957 117 aa3.19□□□□□ -1.9
SCN1A-215ENST00000637285 ZNF252P-AS1Q0IIN9 211 aa3.19□□□□□ -1.9
SCN1A-215ENST00000637285 PUM1Q14671 1186 aaKnown RBP eCLIP3.19□□□□□ -1.9
SCN1A-215ENST00000637285 GRIN3AQ8TCU5 1115 aa3.19□□□□□ -1.9
SCN1A-215ENST00000637285 PANK1Q8TE04 598 aa3.19□□□□□ -1.9
SCN1A-215ENST00000637285 XAGE3Q8WTP9 111 aa3.19□□□□□ -1.9
SCN1A-215ENST00000637285 ELMO3Q96BJ8 720 aa3.19□□□□□ -1.9
SCN1A-215ENST00000637285 GCM1Q9NP62 436 aa3.19□□□□□ -1.9
SCN1A-215ENST00000637285 PCDHA4Q9UN74 947 aa3.19□□□□□ -1.9
SCN1A-215ENST00000637285 PRAMEF27A3QJZ7 478 aa3.18□□□□□ -1.9
SCN1A-215ENST00000637285 RING1Q06587 406 aa3.18□□□□□ -1.9
SCN1A-215ENST00000637285 TNK2Q07912 1038 aa3.18□□□□□ -1.9
SCN1A-215ENST00000637285 VMACQ2NL98 169 aa3.18□□□□□ -1.9
SCN1A-215ENST00000637285 TIGD5Q53EQ6 642 aa3.18□□□□□ -1.9
SCN1A-215ENST00000637285 LETMD1Q6P1Q0 360 aa3.18□□□□□ -1.9
SCN1A-215ENST00000637285 TMPRSS7Q7RTY8 843 aa3.18□□□□□ -1.9
SCN1A-215ENST00000637285 INTS4Q96HW7 963 aaKnown RBP3.18□□□□□ -1.9
SCN1A-215ENST00000637285 NIF3L1Q9GZT8 377 aa3.18□□□□□ -1.9
SCN1A-215ENST00000637285 FBRSQ9HAH7 460 aa3.18□□□□□ -1.9
SCN1A-215ENST00000637285 IRAK3Q9Y616 596 aa3.18□□□□□ -1.9
SCN1A-215ENST00000637285 NDUFB5O43674 189 aa3.17□□□□□ -1.9
SCN1A-215ENST00000637285 SLC24A1O60721 1099 aa3.17□□□□□ -1.9
SCN1A-215ENST00000637285 CYP7A1P22680 504 aa3.17□□□□□ -1.9
SCN1A-215ENST00000637285 TPP2P29144 1249 aaPredicted RBP3.17□□□□□ -1.9
SCN1A-215ENST00000637285 AFF3P51826 1226 aaKnown RBP3.17□□□□□ -1.9
SCN1A-215ENST00000637285 PLP2Q04941 152 aa3.17□□□□□ -1.9
SCN1A-215ENST00000637285 PDE3BQ13370 1112 aa3.17□□□□□ -1.9
SCN1A-215ENST00000637285 SLBPQ14493 270 aaKnown RBP eCLIP3.17□□□□□ -1.9
SCN1A-215ENST00000637285 ZNF746Q6NUN9 644 aaPredicted RBP3.17□□□□□ -1.9
SCN1A-215ENST00000637285 LILRA2Q8N149 483 aa3.17□□□□□ -1.9
SCN1A-215ENST00000637285 OXR1Q8N573 874 aa3.17□□□□□ -1.9
SCN1A-215ENST00000637285 MFSD2AQ8NA29 543 aa3.17□□□□□ -1.9
SCN1A-215ENST00000637285 SYT8Q8NBV8 401 aa3.17□□□□□ -1.9
SCN1A-215ENST00000637285 PDZD8Q8NEN9 1154 aa3.17□□□□□ -1.9
SCN1A-215ENST00000637285 TMC1Q8TDI8 760 aa3.17□□□□□ -1.9
SCN1A-215ENST00000637285 ADAM7Q9H2U9 754 aa3.17□□□□□ -1.9
SCN1A-215ENST00000637285 ZNF552Q9H707 407 aaPredicted RBP3.17□□□□□ -1.9
SCN1A-215ENST00000637285 SP110Q9HB58 689 aa3.17□□□□□ -1.9
SCN1A-215ENST00000637285 GPR160Q9UJ42 338 aa3.17□□□□□ -1.9
SCN1A-215ENST00000637285 YBX2Q9Y2T7 364 aaKnown RBP3.17□□□□□ -1.9
SCN1A-215ENST00000637285 SUV39H1O43463 412 aa3.16□□□□□ -1.9
SCN1A-215ENST00000637285 TRIM37O94972 964 aa3.16□□□□□ -1.9
SCN1A-215ENST00000637285 ZGLP1P0C6A0 271 aa3.16□□□□□ -1.9
SCN1A-215ENST00000637285 XRCC5P13010 732 aaKnown RBP3.16□□□□□ -1.9
SCN1A-215ENST00000637285 PRKCSHP14314 528 aaPredicted RBP3.16□□□□□ -1.9
SCN1A-215ENST00000637285 KIR3DL1P43629 444 aa3.16□□□□□ -1.9
SCN1A-215ENST00000637285 GALK1P51570 392 aa3.16□□□□□ -1.9
SCN1A-215ENST00000637285 EGR3Q06889 387 aa3.16□□□□□ -1.9
SCN1A-215ENST00000637285 INPP5AQ14642 412 aa3.16□□□□□ -1.9
SCN1A-215ENST00000637285 NKG7Q16617 165 aa3.16□□□□□ -1.9
SCN1A-215ENST00000637285 SPATS1Q496A3 300 aa3.16□□□□□ -1.9
SCN1A-215ENST00000637285 LLGL2Q6P1M3 1020 aa3.16□□□□□ -1.9
SCN1A-215ENST00000637285 PI16Q6UXB8 463 aa3.16□□□□□ -1.9
SCN1A-215ENST00000637285 TPTE2Q6XPS3 522 aa3.16□□□□□ -1.9
SCN1A-215ENST00000637285 CDH24Q86UP0 819 aa3.16□□□□□ -1.9
SCN1A-215ENST00000637285 DACT3Q96B18 629 aaPredicted RBP3.16□□□□□ -1.9
SCN1A-215ENST00000637285 SIGLEC10Q96LC7 697 aa3.16□□□□□ -1.9
SCN1A-215ENST00000637285 GPR20Q99678 358 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms