RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 PI4KBQ9UBF8 816 aa24.72■■□□□ 1.55
CLN8-213ENST00000637156 SOCS7O14512 581 aa24.72■■□□□ 1.55
CLN8-213ENST00000637156 CTDNEP1O95476 244 aa24.72■■□□□ 1.55
CLN8-213ENST00000637156 HLA-DOAP06340 250 aa24.72■■□□□ 1.55
CLN8-213ENST00000637156 ZSCAN29Q8IWY8 852 aaPredicted RBP24.72■■□□□ 1.55
CLN8-213ENST00000637156 SLC12A7Q9Y666 1083 aa24.72■■□□□ 1.55
CLN8-213ENST00000637156 CCDC69A6NI79 296 aa24.71■■□□□ 1.55
CLN8-213ENST00000637156 GOLGA8BA8MQT2 603 aa24.71■■□□□ 1.55
CLN8-213ENST00000637156 GJB2P29033 226 aa24.71■■□□□ 1.55
CLN8-213ENST00000637156 MYL10Q9BUA6 226 aa24.71■■□□□ 1.55
CLN8-213ENST00000637156 EHD4Q9H223 541 aa24.71■■□□□ 1.55
CLN8-213ENST00000637156 TMOD2Q9NZR1 351 aa24.71■■□□□ 1.55
CLN8-213ENST00000637156 ECM29Q5VYK3 1845 aa24.71■■□□□ 1.55
CLN8-213ENST00000637156 MYO1BO43795 1136 aa24.7■■□□□ 1.55
CLN8-213ENST00000637156 TSPY3P0CV98 308 aa24.7■■□□□ 1.55
CLN8-213ENST00000637156 TSPY8P0CW00 308 aa24.7■■□□□ 1.55
CLN8-213ENST00000637156 RXRAP19793 462 aa24.7■■□□□ 1.55
CLN8-213ENST00000637156 GPR162Q16538 588 aa24.7■■□□□ 1.55
CLN8-213ENST00000637156 RCSD1Q6JBY9 416 aa24.7■■□□□ 1.55
CLN8-213ENST00000637156 TCP11L1Q9NUJ3 509 aa24.7■■□□□ 1.55
CLN8-213ENST00000637156 FKBP1CQ5VVH2 108 aa24.7■■□□□ 1.54
CLN8-213ENST00000637156 C9orf131Q5VYM1 1079 aa24.7■■□□□ 1.54
CLN8-213ENST00000637156 DNAJC18Q9H819 358 aa24.7■■□□□ 1.54
CLN8-213ENST00000637156 VEZTQ9HBM0 779 aa24.7■■□□□ 1.54
CLN8-213ENST00000637156 SBF1O95248 1867 aa24.7■■□□□ 1.54
CLN8-213ENST00000637156 ATRNL1Q5VV63 1379 aa24.69■■□□□ 1.54
CLN8-213ENST00000637156 ZBTB43O43298 467 aa24.69■■□□□ 1.54
CLN8-213ENST00000637156 JAK2O60674 1132 aa24.69■■□□□ 1.54
CLN8-213ENST00000637156 SHMT1P34896 483 aa24.69■■□□□ 1.54
CLN8-213ENST00000637156 TBC1D10BQ4KMP7 808 aaPredicted RBP24.69■■□□□ 1.54
CLN8-213ENST00000637156 IFIT1BQ5T764 474 aaKnown RBP24.69■■□□□ 1.54
CLN8-213ENST00000637156 FOXP4Q8IVH2 680 aaPredicted RBP24.69■■□□□ 1.54
CLN8-213ENST00000637156 NEDD1Q8NHV4 660 aa24.69■■□□□ 1.54
CLN8-213ENST00000637156 FAM151AQ8WW52 585 aa24.69■■□□□ 1.54
CLN8-213ENST00000637156 LLPHQ9BRT6 129 aaKnown RBP24.69■■□□□ 1.54
CLN8-213ENST00000637156 FAM217BQ9NTX9 383 aaPredicted RBP24.69■■□□□ 1.54
CLN8-213ENST00000637156 SWAP70Q9UH65 585 aa24.69■■□□□ 1.54
CLN8-213ENST00000637156 CNTNAP1P78357 1384 aa24.69■■□□□ 1.54
CLN8-213ENST00000637156 ADD1P35611 737 aaKnown RBP24.68■■□□□ 1.54
CLN8-213ENST00000637156 METTL16Q86W50 562 aaKnown RBP24.68■■□□□ 1.54
CLN8-213ENST00000637156 MICU3Q86XE3 530 aa24.68■■□□□ 1.54
CLN8-213ENST00000637156 NSUN7Q8NE18 718 aaKnown RBP24.68■■□□□ 1.54
CLN8-213ENST00000637156 SMARCC2Q8TAQ2 1214 aa24.68■■□□□ 1.54
CLN8-213ENST00000637156 ZDHHC9Q9Y397 364 aa24.68■■□□□ 1.54
CLN8-213ENST00000637156 DDNO94850 711 aaPredicted RBP24.68■■□□□ 1.54
CLN8-213ENST00000637156 METAP2P50579 478 aaKnown RBP eCLIP24.68■■□□□ 1.54
CLN8-213ENST00000637156 RAB3GAP1Q15042 981 aa24.68■■□□□ 1.54
CLN8-213ENST00000637156 DGKHQ86XP1 1220 aa24.68■■□□□ 1.54
CLN8-213ENST00000637156 ANKS1AQ92625 1134 aa24.68■■□□□ 1.54
CLN8-213ENST00000637156 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.68■■□□□ 1.54
CLN8-213ENST00000637156 GPRC5DQ9NZD1 345 aa24.68■■□□□ 1.54
CLN8-213ENST00000637156 H7C1D1 291 aa24.67■■□□□ 1.54
CLN8-213ENST00000637156 CDC27P30260 824 aa24.67■■□□□ 1.54
CLN8-213ENST00000637156 NUCB2P80303 420 aa24.67■■□□□ 1.54
CLN8-213ENST00000637156 SYNE3Q6ZMZ3 975 aa24.67■■□□□ 1.54
CLN8-213ENST00000637156 CCDC144CPQ8IYA2 1237 aa24.67■■□□□ 1.54
CLN8-213ENST00000637156 ZNF654Q8IZM8 581 aa24.67■■□□□ 1.54
CLN8-213ENST00000637156 PPFIA3O75145 1194 aa24.66■■□□□ 1.54
CLN8-213ENST00000637156 FAM83AQ86UY5 434 aa24.66■■□□□ 1.54
CLN8-213ENST00000637156 SCAF8Q9UPN6 1271 aaKnown RBP24.66■■□□□ 1.54
CLN8-213ENST00000637156 FAM196BA6NMK8 535 aa24.66■■□□□ 1.54
CLN8-213ENST00000637156 SYT1P21579 422 aa24.66■■□□□ 1.54
CLN8-213ENST00000637156 CRACR2BQ8N4Y2 399 aaPredicted RBP24.66■■□□□ 1.54
CLN8-213ENST00000637156 CSRNP1Q96S65 589 aa24.66■■□□□ 1.54
CLN8-213ENST00000637156 PGAP2Q9UHJ9 254 aa24.66■■□□□ 1.54
CLN8-213ENST00000637156 DICER1Q9UPY3 1922 aaKnown RBP24.65■■□□□ 1.54
CLN8-213ENST00000637156 DHX16O60231 1041 aaKnown RBP24.65■■□□□ 1.54
CLN8-213ENST00000637156 AKR1B1P15121 316 aa24.65■■□□□ 1.54
CLN8-213ENST00000637156 EPS15P42566 896 aa24.65■■□□□ 1.54
CLN8-213ENST00000637156 TROAPQ12815 778 aa24.65■■□□□ 1.54
CLN8-213ENST00000637156 KIF4BQ2VIQ3 1234 aa24.65■■□□□ 1.54
CLN8-213ENST00000637156 FANCBQ8NB91 859 aa24.65■■□□□ 1.54
CLN8-213ENST00000637156 CHMP4CQ96CF2 233 aa24.65■■□□□ 1.54
CLN8-213ENST00000637156 DDX11Q96FC9 970 aa24.65■■□□□ 1.54
CLN8-213ENST00000637156 TMEM39BQ9GZU3 492 aa24.65■■□□□ 1.54
CLN8-213ENST00000637156 ASTN2O75129 1339 aaPredicted RBP24.65■■□□□ 1.54
CLN8-213ENST00000637156 CCDC178Q5BJE1 867 aa24.64■■□□□ 1.54
CLN8-213ENST00000637156 TATDN1Q6P1N9 297 aa24.64■■□□□ 1.54
CLN8-213ENST00000637156 CDAN1Q8IWY9 1227 aa24.64■■□□□ 1.54
CLN8-213ENST00000637156 GOLGA8AA7E2F4 631 aa24.64■■□□□ 1.53
CLN8-213ENST00000637156 NOVP48745 357 aa24.64■■□□□ 1.53
CLN8-213ENST00000637156 NTRK3Q16288 839 aa24.64■■□□□ 1.53
CLN8-213ENST00000637156 NUP133Q8WUM0 1156 aa24.64■■□□□ 1.53
CLN8-213ENST00000637156 COL2A1P02458 1487 aaPredicted RBP24.63■■□□□ 1.53
CLN8-213ENST00000637156 PTPDC1A2A3K4 754 aa24.63■■□□□ 1.53
CLN8-213ENST00000637156 BRD1O95696 1058 aa24.63■■□□□ 1.53
CLN8-213ENST00000637156 FDPSP14324 419 aaKnown RBP24.63■■□□□ 1.53
CLN8-213ENST00000637156 RCAN1P53805 252 aa24.63■■□□□ 1.53
CLN8-213ENST00000637156 CATIPQ7Z7H3 387 aa24.63■■□□□ 1.53
CLN8-213ENST00000637156 TNPO1Q92973 898 aaKnown RBP24.63■■□□□ 1.53
CLN8-213ENST00000637156 CEP95Q96GE4 821 aa24.63■■□□□ 1.53
CLN8-213ENST00000637156 GRIN3BO60391 1043 aa24.62■■□□□ 1.53
CLN8-213ENST00000637156 LARP1BQ659C4 914 aaKnown RBP24.62■■□□□ 1.53
CLN8-213ENST00000637156 HACL1Q9UJ83 578 aa24.62■■□□□ 1.53
CLN8-213ENST00000637156 TAOK2Q9UL54 1235 aa24.62■■□□□ 1.53
CLN8-213ENST00000637156 STX8Q9UNK0 236 aa24.62■■□□□ 1.53
CLN8-213ENST00000637156 NID2Q14112 1375 aa24.62■■□□□ 1.53
CLN8-213ENST00000637156 CPLX1O14810 134 aa24.62■■□□□ 1.53
CLN8-213ENST00000637156 HIRAP54198 1017 aaPredicted RBP24.62■■□□□ 1.53
CLN8-213ENST00000637156 RASA3Q14644 834 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms