RNA–Protein interactions for RNA: ENST00000636780.1

CLN5-216, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 2,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-216ENST00000636780 RPS6KA4O75676 772 aa21.75■■□□□ 1.07
CLN5-216ENST00000636780 FAM196AQ6ZSG2 479 aa21.75■■□□□ 1.07
CLN5-216ENST00000636780 DCP1AQ9NPI6 582 aaPredicted RBP21.75■■□□□ 1.07
CLN5-216ENST00000636780 SLC44A5Q8NCS7 719 aa21.74■■□□□ 1.07
CLN5-216ENST00000636780 HSD3B7Q9H2F3 369 aa21.74■■□□□ 1.07
CLN5-216ENST00000636780 SERTAD1Q9UHV2 236 aa21.74■■□□□ 1.07
CLN5-216ENST00000636780 SKILP12757 684 aa21.74■■□□□ 1.07
CLN5-216ENST00000636780 NLRP12P59046 1061 aa21.74■■□□□ 1.07
CLN5-216ENST00000636780 RESP18Q5W5W9 173 aa21.74■■□□□ 1.07
CLN5-216ENST00000636780 TMC6Q7Z403 805 aa21.74■■□□□ 1.07
CLN5-216ENST00000636780 EPSTI1Q96J88 318 aa21.74■■□□□ 1.07
CLN5-216ENST00000636780 LRRC4BQ9NT99 713 aa21.74■■□□□ 1.07
CLN5-216ENST00000636780 TPTE2Q6XPS3 522 aa21.73■■□□□ 1.07
CLN5-216ENST00000636780 TRMT44Q8IYL2 757 aaKnown RBP21.73■■□□□ 1.07
CLN5-216ENST00000636780 RNF41Q9H4P4 317 aaPredicted RBP21.73■■□□□ 1.07
CLN5-216ENST00000636780 SAFBQ15424 915 aaKnown RBP eCLIP21.73■■□□□ 1.07
CLN5-216ENST00000636780 TPD52L1Q16890 204 aaPredicted RBP21.73■■□□□ 1.07
CLN5-216ENST00000636780 MYRIPQ8NFW9 859 aa21.73■■□□□ 1.07
CLN5-216ENST00000636780 MCM9Q9NXL9 1143 aa21.73■■□□□ 1.07
CLN5-216ENST00000636780 LTBP4Q8N2S1 1624 aa21.73■■□□□ 1.07
CLN5-216ENST00000636780 DEXIO95424 95 aa21.73■■□□□ 1.07
CLN5-216ENST00000636780 ZNF174Q15697 407 aa21.73■■□□□ 1.07
CLN5-216ENST00000636780 CSRNP2Q9H175 543 aa21.73■■□□□ 1.07
CLN5-216ENST00000636780 CPVLQ9H3G5 476 aa21.73■■□□□ 1.07
CLN5-216ENST00000636780 RFC4P35249 363 aa21.72■■□□□ 1.07
CLN5-216ENST00000636780 SARM1Q6SZW1 724 aa21.72■■□□□ 1.07
CLN5-216ENST00000636780 SRBD1Q8N5C6 995 aaKnown RBP21.72■■□□□ 1.07
CLN5-216ENST00000636780 KRI1Q8N9T8 703 aaKnown RBP21.72■■□□□ 1.07
CLN5-216ENST00000636780 NAT10Q9H0A0 1025 aaKnown RBP21.72■■□□□ 1.07
CLN5-216ENST00000636780 SAP30BPQ9UHR5 308 aaKnown RBP21.72■■□□□ 1.07
CLN5-216ENST00000636780 FBXO2Q9UK22 296 aaPredicted RBP21.72■■□□□ 1.07
CLN5-216ENST00000636780 A0A087X0B3 334 aa21.72■■□□□ 1.07
CLN5-216ENST00000636780 TMEM232C9JQI7 657 aa21.72■■□□□ 1.07
CLN5-216ENST00000636780 PPP6R2O75170 966 aa21.72■■□□□ 1.07
CLN5-216ENST00000636780 TROAPQ12815 778 aa21.72■■□□□ 1.07
CLN5-216ENST00000636780 VPS72Q15906 364 aa21.72■■□□□ 1.07
CLN5-216ENST00000636780 SLC10A5Q5PT55 438 aa21.72■■□□□ 1.07
CLN5-216ENST00000636780 SRCAPQ6ZRS2 3230 aa21.72■■□□□ 1.07
CLN5-216ENST00000636780 ZNF710Q8N1W2 664 aa21.72■■□□□ 1.07
CLN5-216ENST00000636780 MRFAP1L1Q96HT8 127 aa21.72■■□□□ 1.07
CLN5-216ENST00000636780 DOCK2Q92608 1830 aa21.71■■□□□ 1.07
CLN5-216ENST00000636780 FUT2Q10981 343 aa21.71■■□□□ 1.07
CLN5-216ENST00000636780 KRBA2Q6ZNG9 492 aa21.71■■□□□ 1.07
CLN5-216ENST00000636780 TNNT1P13805 278 aa21.71■■□□□ 1.07
CLN5-216ENST00000636780 AFMP43652 599 aa21.71■■□□□ 1.07
CLN5-216ENST00000636780 AKAP17AQ02040 695 aaKnown RBP21.71■■□□□ 1.07
CLN5-216ENST00000636780 FANCLQ9NW38 375 aa21.71■■□□□ 1.07
CLN5-216ENST00000636780 ARAP2Q8WZ64 1704 aa21.7■■□□□ 1.07
CLN5-216ENST00000636780 MYH13Q9UKX3 1938 aa21.7■■□□□ 1.06
CLN5-216ENST00000636780 CDC25AP30304 524 aa21.7■■□□□ 1.06
CLN5-216ENST00000636780 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.7■■□□□ 1.06
CLN5-216ENST00000636780 SH3RF3Q8TEJ3 882 aaPredicted RBP21.7■■□□□ 1.06
CLN5-216ENST00000636780 CACNA1SQ13698 1873 aa21.7■■□□□ 1.06
CLN5-216ENST00000636780 ECM29Q5VYK3 1845 aa21.7■■□□□ 1.06
CLN5-216ENST00000636780 USP17L3A6NCW0 530 aa21.7■■□□□ 1.06
CLN5-216ENST00000636780 USP17L4A6NCW7 530 aa21.7■■□□□ 1.06
CLN5-216ENST00000636780 CCZ1BP86790 482 aa21.7■■□□□ 1.06
CLN5-216ENST00000636780 CCZ1P86791 482 aaPredicted RBP21.7■■□□□ 1.06
CLN5-216ENST00000636780 USP17L1Q7RTZ2 530 aa21.7■■□□□ 1.06
CLN5-216ENST00000636780 CATIPQ7Z7H3 387 aa21.7■■□□□ 1.06
CLN5-216ENST00000636780 DZIP1Q86YF9 867 aaKnown RBP21.7■■□□□ 1.06
CLN5-216ENST00000636780 CNTNAP4Q9C0A0 1308 aa21.69■■□□□ 1.06
CLN5-216ENST00000636780 ARMCX5Q6P1M9 558 aa21.69■■□□□ 1.06
CLN5-216ENST00000636780 RASGRP4Q8TDF6 673 aa21.69■■□□□ 1.06
CLN5-216ENST00000636780 CHD4Q14839 1912 aa21.69■■□□□ 1.06
CLN5-216ENST00000636780 TSPY2A6NKD2 308 aa21.69■■□□□ 1.06
CLN5-216ENST00000636780 IQCA1Q86XH1 822 aa21.69■■□□□ 1.06
CLN5-216ENST00000636780 STAG2Q8N3U4 1231 aa21.69■■□□□ 1.06
CLN5-216ENST00000636780 JMYQ8N9B5 988 aa21.69■■□□□ 1.06
CLN5-216ENST00000636780 GPKOWQ92917 476 aaPredicted RBP eCLIP21.69■■□□□ 1.06
CLN5-216ENST00000636780 ANAPC4Q9UJX5 808 aa21.69■■□□□ 1.06
CLN5-216ENST00000636780 CUTAO60888 179 aa21.68■■□□□ 1.06
CLN5-216ENST00000636780 CAVIN2O95810 425 aa21.68■■□□□ 1.06
CLN5-216ENST00000636780 TPM3P06753 285 aa21.68■■□□□ 1.06
CLN5-216ENST00000636780 SMYD4Q8IYR2 804 aaPredicted RBP21.68■■□□□ 1.06
CLN5-216ENST00000636780 DHX58Q96C10 678 aa21.68■■□□□ 1.06
CLN5-216ENST00000636780 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.68■■□□□ 1.06
CLN5-216ENST00000636780 STK36Q9NRP7 1315 aa21.68■■□□□ 1.06
CLN5-216ENST00000636780 FANCCQ00597 558 aa21.68■■□□□ 1.06
CLN5-216ENST00000636780 FMR1Q06787 632 aaKnown RBP eCLIP21.68■■□□□ 1.06
CLN5-216ENST00000636780 TERF1P54274 439 aa21.67■■□□□ 1.06
CLN5-216ENST00000636780 TMTC2Q8N394 836 aa21.67■■□□□ 1.06
CLN5-216ENST00000636780 TGFBRAP1Q8WUH2 860 aa21.67■■□□□ 1.06
CLN5-216ENST00000636780 BCORQ6W2J9 1755 aa21.67■■□□□ 1.06
CLN5-216ENST00000636780 PTPREP23469 700 aa21.67■■□□□ 1.06
CLN5-216ENST00000636780 PLCD1P51178 756 aa21.67■■□□□ 1.06
CLN5-216ENST00000636780 RBM6P78332 1123 aaKnown RBP21.67■■□□□ 1.06
CLN5-216ENST00000636780 TRAPPC3LQ5T215 181 aa21.67■■□□□ 1.06
CLN5-216ENST00000636780 OLFM4Q6UX06 510 aa21.67■■□□□ 1.06
CLN5-216ENST00000636780 WASF1Q92558 559 aa21.67■■□□□ 1.06
CLN5-216ENST00000636780 BRIP1Q9BX63 1249 aa21.67■■□□□ 1.06
CLN5-216ENST00000636780 NOL12Q9UGY1 213 aaKnown RBP eCLIP21.67■■□□□ 1.06
CLN5-216ENST00000636780 TUBE1Q9UJT0 475 aa21.67■■□□□ 1.06
CLN5-216ENST00000636780 V9GYY5 206 aaPredicted RBP21.67■■□□□ 1.06
CLN5-216ENST00000636780 CCDC196A0A1B0GTZ2 297 aa21.66■■□□□ 1.06
CLN5-216ENST00000636780 MDM2Q00987 491 aaPredicted RBP21.66■■□□□ 1.06
CLN5-216ENST00000636780 TFAP4Q01664 338 aa21.66■■□□□ 1.06
CLN5-216ENST00000636780 MAPKAPK5Q8IW41 473 aa21.66■■□□□ 1.06
CLN5-216ENST00000636780 NYXQ9GZU5 481 aa21.66■■□□□ 1.06
CLN5-216ENST00000636780 FOXP1Q9H334 677 aaPredicted RBP21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms