RNA–Protein interactions for RNA: ENST00000635917.1

CACNA1A-219, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,832 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-219ENST00000635917 CCDC196A0A1B0GTZ2 297 aa14.57□□□□□ -0.08
CACNA1A-219ENST00000635917 LIG1P18858 919 aa14.57□□□□□ -0.08
CACNA1A-219ENST00000635917 U2AF2P26368 475 aaKnown RBP eCLIP14.57□□□□□ -0.08
CACNA1A-219ENST00000635917 DOK7Q18PE1 504 aa14.57□□□□□ -0.08
CACNA1A-219ENST00000635917 FAM47AQ5JRC9 791 aa14.57□□□□□ -0.08
CACNA1A-219ENST00000635917 IFIT1BQ5T764 474 aaKnown RBP14.57□□□□□ -0.08
CACNA1A-219ENST00000635917 PODNQ7Z5L7 613 aa14.57□□□□□ -0.08
CACNA1A-219ENST00000635917 MAPKAPK5Q8IW41 473 aa14.57□□□□□ -0.08
CACNA1A-219ENST00000635917 ANKS1AQ92625 1134 aa14.57□□□□□ -0.08
CACNA1A-219ENST00000635917 CNKSR1Q969H4 720 aa14.57□□□□□ -0.08
CACNA1A-219ENST00000635917 DYNLL2Q96FJ2 89 aa14.57□□□□□ -0.08
CACNA1A-219ENST00000635917 RBSNQ9H1K0 784 aa14.57□□□□□ -0.08
CACNA1A-219ENST00000635917 BAG6P46379 1132 aa14.56□□□□□ -0.08
CACNA1A-219ENST00000635917 SSRP1Q08945 709 aaKnown RBP14.56□□□□□ -0.08
CACNA1A-219ENST00000635917 MYSM1Q5VVJ2 828 aa14.56□□□□□ -0.08
CACNA1A-219ENST00000635917 EYA3Q99504 573 aa14.56□□□□□ -0.08
CACNA1A-219ENST00000635917 NOL10Q9BSC4 688 aaKnown RBP14.56□□□□□ -0.08
CACNA1A-219ENST00000635917 RTEL1Q9NZ71 1219 aa14.56□□□□□ -0.08
CACNA1A-219ENST00000635917 MYH8P13535 1937 aa14.56□□□□□ -0.08
CACNA1A-219ENST00000635917 DDAH1O94760 285 aa14.55□□□□□ -0.08
CACNA1A-219ENST00000635917 TEX11Q8IYF3 940 aa14.55□□□□□ -0.08
CACNA1A-219ENST00000635917 SHISA4Q96DD7 197 aa14.55□□□□□ -0.08
CACNA1A-219ENST00000635917 FUCA2Q9BTY2 467 aa14.55□□□□□ -0.08
CACNA1A-219ENST00000635917 MXD3Q9BW11 206 aa14.55□□□□□ -0.08
CACNA1A-219ENST00000635917 SLC26A6Q9BXS9 759 aa14.55□□□□□ -0.08
CACNA1A-219ENST00000635917 RNF26Q9BY78 433 aaPredicted RBP14.55□□□□□ -0.08
CACNA1A-219ENST00000635917 KCNQ5Q9NR82 932 aa14.55□□□□□ -0.08
CACNA1A-219ENST00000635917 TCP11L1Q9NUJ3 509 aa14.55□□□□□ -0.08
CACNA1A-219ENST00000635917 POLR3EQ9NVU0 708 aa14.55□□□□□ -0.08
CACNA1A-219ENST00000635917 RASA1P20936 1047 aa14.55□□□□□ -0.08
CACNA1A-219ENST00000635917 NASPP49321 788 aaPredicted RBP14.55□□□□□ -0.08
CACNA1A-219ENST00000635917 FKBP1AP62942 108 aaKnown RBP14.55□□□□□ -0.08
CACNA1A-219ENST00000635917 PKN1Q16512 942 aa14.55□□□□□ -0.08
CACNA1A-219ENST00000635917 SLC4A8Q2Y0W8 1093 aa14.55□□□□□ -0.08
CACNA1A-219ENST00000635917 C16orf86Q6ZW13 317 aa14.55□□□□□ -0.08
CACNA1A-219ENST00000635917 CMTR1Q8N1G2 835 aaKnown RBP14.55□□□□□ -0.08
CACNA1A-219ENST00000635917 LINC00301Q8NCQ3 95 aa14.55□□□□□ -0.08
CACNA1A-219ENST00000635917 SLC44A5Q8NCS7 719 aa14.55□□□□□ -0.08
CACNA1A-219ENST00000635917 NUP133Q8WUM0 1156 aa14.55□□□□□ -0.08
CACNA1A-219ENST00000635917 ZNF396Q96N95 335 aaPredicted RBP14.55□□□□□ -0.08
CACNA1A-219ENST00000635917 TSPY2A6NKD2 308 aa14.54□□□□□ -0.08
CACNA1A-219ENST00000635917 WDHD1O75717 1129 aaPredicted RBP14.54□□□□□ -0.08
CACNA1A-219ENST00000635917 DEXIO95424 95 aa14.54□□□□□ -0.08
CACNA1A-219ENST00000635917 POLR3DP05423 398 aaPredicted RBP14.54□□□□□ -0.08
CACNA1A-219ENST00000635917 CALM1P0DP23 149 aa14.54□□□□□ -0.08
CACNA1A-219ENST00000635917 CALM2P0DP24 149 aa14.54□□□□□ -0.08
CACNA1A-219ENST00000635917 CALM3P0DP25 149 aa14.54□□□□□ -0.08
CACNA1A-219ENST00000635917 HHIPL2Q6UWX4 724 aa14.54□□□□□ -0.08
CACNA1A-219ENST00000635917 CATIPQ7Z7H3 387 aa14.54□□□□□ -0.08
CACNA1A-219ENST00000635917 DGKHQ86XP1 1220 aa14.54□□□□□ -0.08
CACNA1A-219ENST00000635917 MRIQ9BWK5 157 aa14.54□□□□□ -0.08
CACNA1A-219ENST00000635917 TMX4Q9H1E5 349 aaPredicted RBP14.54□□□□□ -0.08
CACNA1A-219ENST00000635917 DBNDD1Q9H9R9 158 aa14.54□□□□□ -0.08
CACNA1A-219ENST00000635917 TTF2Q9UNY4 1162 aaKnown RBP14.54□□□□□ -0.08
CACNA1A-219ENST00000635917 SIPA1L1O43166 1804 aa14.54□□□□□ -0.08
CACNA1A-219ENST00000635917 LETM1O95202 739 aaPredicted RBP14.53□□□□□ -0.08
CACNA1A-219ENST00000635917 KCNA3P22001 575 aa14.53□□□□□ -0.08
CACNA1A-219ENST00000635917 NOVP48745 357 aa14.53□□□□□ -0.08
CACNA1A-219ENST00000635917 TFAP4Q01664 338 aa14.53□□□□□ -0.08
CACNA1A-219ENST00000635917 GABPAQ06546 454 aa14.53□□□□□ -0.08
CACNA1A-219ENST00000635917 DACT2Q5SW24 774 aa14.53□□□□□ -0.08
CACNA1A-219ENST00000635917 APOBEC3HQ6NTF7 200 aaKnown RBP14.53□□□□□ -0.08
CACNA1A-219ENST00000635917 RBM43Q6ZSC3 357 aaKnown RBP14.53□□□□□ -0.08
CACNA1A-219ENST00000635917 SLC16A10Q8TF71 515 aa14.53□□□□□ -0.08
CACNA1A-219ENST00000635917 WASF1Q92558 559 aa14.53□□□□□ -0.08
CACNA1A-219ENST00000635917 RBM28Q9NW13 759 aaKnown RBP14.53□□□□□ -0.08
CACNA1A-219ENST00000635917 SAP30BPQ9UHR5 308 aaKnown RBP14.53□□□□□ -0.08
CACNA1A-219ENST00000635917 GREB1LQ9C091 1923 aaPredicted RBP14.53□□□□□ -0.08
CACNA1A-219ENST00000635917 PLEKHA8P1O95397 391 aa14.52□□□□□ -0.08
CACNA1A-219ENST00000635917 YEATS4O95619 227 aa14.52□□□□□ -0.08
CACNA1A-219ENST00000635917 MMP1P03956 469 aa14.52□□□□□ -0.08
CACNA1A-219ENST00000635917 CDK8P49336 464 aa14.52□□□□□ -0.08
CACNA1A-219ENST00000635917 CEBPZQ03701 1054 aaKnown RBP14.52□□□□□ -0.08
CACNA1A-219ENST00000635917 KIAA2012Q0VF49 1180 aa14.52□□□□□ -0.08
CACNA1A-219ENST00000635917 STRIP1Q5VSL9 837 aa14.52□□□□□ -0.08
CACNA1A-219ENST00000635917 CC2D2BQ6DHV5 1058 aa14.52□□□□□ -0.08
CACNA1A-219ENST00000635917 TMTC3Q6ZXV5 915 aa14.52□□□□□ -0.08
CACNA1A-219ENST00000635917 TRIM22Q8IYM9 498 aa14.52□□□□□ -0.08
CACNA1A-219ENST00000635917 MAP3K14Q99558 947 aa14.52□□□□□ -0.08
CACNA1A-219ENST00000635917 DDX4Q9NQI0 724 aaKnown RBP14.52□□□□□ -0.08
CACNA1A-219ENST00000635917 DACT1Q9NYF0 836 aa14.52□□□□□ -0.08
CACNA1A-219ENST00000635917 CLIC4Q9Y696 253 aa14.52□□□□□ -0.08
CACNA1A-219ENST00000635917 CNTNAP5Q8WYK1 1306 aa14.52□□□□□ -0.08
CACNA1A-219ENST00000635917 PRPF3O43395 683 aaKnown RBP14.52□□□□□ -0.09
CACNA1A-219ENST00000635917 NR1I2O75469 434 aa14.52□□□□□ -0.09
CACNA1A-219ENST00000635917 VASPP50552 380 aaPredicted RBP14.52□□□□□ -0.09
CACNA1A-219ENST00000635917 AMOTL1Q8IY63 956 aa14.52□□□□□ -0.09
CACNA1A-219ENST00000635917 CCDC82Q8N4S0 544 aa14.52□□□□□ -0.09
CACNA1A-219ENST00000635917 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.52□□□□□ -0.09
CACNA1A-219ENST00000635917 BRCA1P38398 1863 aaKnown RBP14.51□□□□□ -0.09
CACNA1A-219ENST00000635917 ECE2O60344 883 aa14.51□□□□□ -0.09
CACNA1A-219ENST00000635917 SF3B2Q13435 895 aaKnown RBP14.51□□□□□ -0.09
CACNA1A-219ENST00000635917 SNW1Q13573 536 aaKnown RBP14.51□□□□□ -0.09
CACNA1A-219ENST00000635917 TPRNQ4KMQ1 711 aa14.51□□□□□ -0.09
CACNA1A-219ENST00000635917 SRBD1Q8N5C6 995 aaKnown RBP14.51□□□□□ -0.09
CACNA1A-219ENST00000635917 ENGASEQ8NFI3 743 aa14.51□□□□□ -0.09
CACNA1A-219ENST00000635917 PCDHA7Q9UN72 937 aa14.51□□□□□ -0.09
CACNA1A-219ENST00000635917 PLIN4Q96Q06 1357 aa14.5□□□□□ -0.09
CACNA1A-219ENST00000635917 USP17L3A6NCW0 530 aa14.5□□□□□ -0.09
CACNA1A-219ENST00000635917 USP17L4A6NCW7 530 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms