RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 SRPRBQ9Y5M8 271 aaKnown RBP5.18□□□□□ -1.58
SCN1A-210ENST00000635776 PKD1L3Q7Z443 1732 aa5.18□□□□□ -1.58
SCN1A-210ENST00000635776 A0A1B0GVL5 298 aa5.18□□□□□ -1.58
SCN1A-210ENST00000635776 KDM4FA0A1W2PPD8 638 aa5.18□□□□□ -1.58
SCN1A-210ENST00000635776 NR1I2O75469 434 aa5.18□□□□□ -1.58
SCN1A-210ENST00000635776 SCG2P13521 617 aa5.18□□□□□ -1.58
SCN1A-210ENST00000635776 TNNT1P13805 278 aa5.18□□□□□ -1.58
SCN1A-210ENST00000635776 ADD1P35611 737 aaKnown RBP5.18□□□□□ -1.58
SCN1A-210ENST00000635776 TTC38Q5R3I4 469 aa5.18□□□□□ -1.58
SCN1A-210ENST00000635776 FAM173BQ6P4H8 233 aa5.18□□□□□ -1.58
SCN1A-210ENST00000635776 CGNQ9P2M7 1197 aaKnown RBP5.18□□□□□ -1.58
SCN1A-210ENST00000635776 C6orf229H3BNL8 230 aa5.18□□□□□ -1.58
SCN1A-210ENST00000635776 IQCEQ6IPM2 695 aa5.18□□□□□ -1.58
SCN1A-210ENST00000635776 FMNL3Q8IVF7 1028 aa5.18□□□□□ -1.58
SCN1A-210ENST00000635776 LY9Q9HBG7 655 aa5.18□□□□□ -1.58
SCN1A-210ENST00000635776 ERFEQ4G0M1 354 aa5.18□□□□□ -1.58
SCN1A-210ENST00000635776 FBXO33Q7Z6M2 555 aa5.18□□□□□ -1.58
SCN1A-210ENST00000635776 ZNF397Q8NF99 534 aaPredicted RBP5.18□□□□□ -1.58
SCN1A-210ENST00000635776 GBP3Q9H0R5 595 aa5.18□□□□□ -1.58
SCN1A-210ENST00000635776 USP17L12C9JPN9 530 aa5.18□□□□□ -1.58
SCN1A-210ENST00000635776 USP17L21D6R901 530 aa5.18□□□□□ -1.58
SCN1A-210ENST00000635776 DTHD1Q6ZMT9 781 aa5.18□□□□□ -1.58
SCN1A-210ENST00000635776 CNGA4Q8IV77 575 aa5.18□□□□□ -1.58
SCN1A-210ENST00000635776 FMR1NBQ8N0W7 255 aaPredicted RBP5.18□□□□□ -1.58
SCN1A-210ENST00000635776 LCORLQ8N3X6 602 aa5.18□□□□□ -1.58
SCN1A-210ENST00000635776 SEC31BQ9NQW1 1179 aa5.18□□□□□ -1.58
SCN1A-210ENST00000635776 NSFL1CQ9UNZ2 370 aaKnown RBP5.18□□□□□ -1.58
SCN1A-210ENST00000635776 PARP1P09874 1014 aaKnown RBP5.18□□□□□ -1.58
SCN1A-210ENST00000635776 PTPREP23469 700 aa5.18□□□□□ -1.58
SCN1A-210ENST00000635776 FKBP15Q5T1M5 1219 aa5.18□□□□□ -1.58
SCN1A-210ENST00000635776 JAKMIP3Q5VZ66 844 aa5.18□□□□□ -1.58
SCN1A-210ENST00000635776 TEX11Q8IYF3 940 aa5.18□□□□□ -1.58
SCN1A-210ENST00000635776 AATFQ9NY61 560 aaKnown RBP eCLIP5.18□□□□□ -1.58
SCN1A-210ENST00000635776 RGPD8O14715 1765 aaPredicted RBP5.18□□□□□ -1.58
SCN1A-210ENST00000635776 ARHGAP6O43182 974 aa5.18□□□□□ -1.58
SCN1A-210ENST00000635776 MCM3P25205 808 aa5.18□□□□□ -1.58
SCN1A-210ENST00000635776 MRPL12P52815 198 aaKnown RBP5.18□□□□□ -1.58
SCN1A-210ENST00000635776 CTDSPL2Q05D32 466 aa5.18□□□□□ -1.58
SCN1A-210ENST00000635776 FUCA2Q9BTY2 467 aa5.18□□□□□ -1.58
SCN1A-210ENST00000635776 AHDC1Q5TGY3 1603 aaPredicted RBP5.17□□□□□ -1.58
SCN1A-210ENST00000635776 POSTNQ15063 836 aa5.17□□□□□ -1.58
SCN1A-210ENST00000635776 NONOQ15233 471 aaKnown RBP eCLIP5.17□□□□□ -1.58
SCN1A-210ENST00000635776 TBC1D10CQ8IV04 446 aa5.17□□□□□ -1.58
SCN1A-210ENST00000635776 KIAA1524Q8TCG1 905 aa5.17□□□□□ -1.58
SCN1A-210ENST00000635776 CRAMP1Q96RY5 1269 aa5.17□□□□□ -1.58
SCN1A-210ENST00000635776 TSG101Q99816 390 aa5.17□□□□□ -1.58
SCN1A-210ENST00000635776 CABP5Q9NP86 173 aa5.17□□□□□ -1.58
SCN1A-210ENST00000635776 V9GY48 417 aaPredicted RBP5.17□□□□□ -1.58
SCN1A-210ENST00000635776 NID2Q14112 1375 aa5.17□□□□□ -1.58
SCN1A-210ENST00000635776 A0A0U1RQG5 324 aaPredicted RBP5.17□□□□□ -1.58
SCN1A-210ENST00000635776 SLC26A4O43511 780 aa5.17□□□□□ -1.58
SCN1A-210ENST00000635776 ENOX1Q8TC92 643 aaKnown RBP5.17□□□□□ -1.58
SCN1A-210ENST00000635776 IGDCC4Q8TDY8 1250 aa5.17□□□□□ -1.58
SCN1A-210ENST00000635776 GYG1P46976 350 aa5.17□□□□□ -1.58
SCN1A-210ENST00000635776 PPP1R18Q6NYC8 613 aa5.17□□□□□ -1.58
SCN1A-210ENST00000635776 MYRIPQ8NFW9 859 aa5.17□□□□□ -1.58
SCN1A-210ENST00000635776 SLFN14P0C7P3 912 aa5.17□□□□□ -1.58
SCN1A-210ENST00000635776 TMC6Q7Z403 805 aa5.17□□□□□ -1.58
SCN1A-210ENST00000635776 STX8Q9UNK0 236 aa5.17□□□□□ -1.58
SCN1A-210ENST00000635776 UBN2Q6ZU65 1347 aa5.17□□□□□ -1.58
SCN1A-210ENST00000635776 UFL1O94874 794 aa5.17□□□□□ -1.58
SCN1A-210ENST00000635776 MARCKSP29966 332 aaPredicted RBP5.17□□□□□ -1.58
SCN1A-210ENST00000635776 ANTXR2P58335 489 aa5.17□□□□□ -1.58
SCN1A-210ENST00000635776 PPP4CP60510 307 aa5.17□□□□□ -1.58
SCN1A-210ENST00000635776 SNW1Q13573 536 aaKnown RBP5.17□□□□□ -1.58
SCN1A-210ENST00000635776 SCARF1Q14162 830 aa5.17□□□□□ -1.58
SCN1A-210ENST00000635776 ERMNQ8TAM6 284 aa5.17□□□□□ -1.58
SCN1A-210ENST00000635776 GPATCH4Q5T3I0 446 aaKnown RBP5.17□□□□□ -1.58
SCN1A-210ENST00000635776 RESP18Q5W5W9 173 aa5.17□□□□□ -1.58
SCN1A-210ENST00000635776 PGBD1Q96JS3 809 aa5.17□□□□□ -1.58
SCN1A-210ENST00000635776 FAM84BQ96KN1 310 aaPredicted RBP5.17□□□□□ -1.58
SCN1A-210ENST00000635776 COA1Q9GZY4 146 aa5.17□□□□□ -1.58
SCN1A-210ENST00000635776 TUBE1Q9UJT0 475 aa5.17□□□□□ -1.58
SCN1A-210ENST00000635776 PARP3Q9Y6F1 533 aa5.17□□□□□ -1.58
SCN1A-210ENST00000635776 FAM237AA0A1B0GTK4 181 aa5.17□□□□□ -1.58
SCN1A-210ENST00000635776 ERLIN1O75477 346 aa5.17□□□□□ -1.58
SCN1A-210ENST00000635776 TFAP4Q01664 338 aa5.17□□□□□ -1.58
SCN1A-210ENST00000635776 SH2D4AQ9H788 454 aa5.17□□□□□ -1.58
SCN1A-210ENST00000635776 TCEAL9Q9UHQ7 104 aa5.17□□□□□ -1.58
SCN1A-210ENST00000635776 RIC1Q4ADV7 1423 aa5.17□□□□□ -1.58
SCN1A-210ENST00000635776 STAT6P42226 847 aa5.17□□□□□ -1.58
SCN1A-210ENST00000635776 ASPRV1Q53RT3 343 aa5.17□□□□□ -1.58
SCN1A-210ENST00000635776 TMTC3Q6ZXV5 915 aa5.17□□□□□ -1.58
SCN1A-210ENST00000635776 BLIDQ8IZY5 108 aa5.17□□□□□ -1.58
SCN1A-210ENST00000635776 FNBP4Q8N3X1 1017 aaPredicted RBP5.17□□□□□ -1.58
SCN1A-210ENST00000635776 KCTD17Q8N5Z5 321 aa5.17□□□□□ -1.58
SCN1A-210ENST00000635776 PDILTQ8N807 584 aa5.17□□□□□ -1.58
SCN1A-210ENST00000635776 NUP58Q9BVL2 599 aa5.17□□□□□ -1.58
SCN1A-210ENST00000635776 N4BP2Q86UW6 1770 aaPredicted RBP5.16□□□□□ -1.58
SCN1A-210ENST00000635776 ENGASEQ8NFI3 743 aa5.16□□□□□ -1.58
SCN1A-210ENST00000635776 ZNF592Q92610 1267 aa5.16□□□□□ -1.58
SCN1A-210ENST00000635776 BCL9LQ86UU0 1499 aa5.16□□□□□ -1.58
SCN1A-210ENST00000635776 TCRBV5S4A2TA0A5A2 114 aa5.16□□□□□ -1.58
SCN1A-210ENST00000635776 GTPBP6O43824 516 aaPredicted RBP5.16□□□□□ -1.58
SCN1A-210ENST00000635776 NAPAP54920 295 aa5.16□□□□□ -1.58
SCN1A-210ENST00000635776 CEP135Q66GS9 1140 aa5.16□□□□□ -1.58
SCN1A-210ENST00000635776 WWC2Q6AWC2 1192 aa5.16□□□□□ -1.58
SCN1A-210ENST00000635776 PLA2G4DQ86XP0 818 aa5.16□□□□□ -1.58
SCN1A-210ENST00000635776 CCDC144CPQ8IYA2 1237 aa5.16□□□□□ -1.58
SCN1A-210ENST00000635776 HDAC9Q9UKV0 1011 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms