RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 ATP8A2Q9NTI2 1148 aa22.05■■□□□ 1.12
CLN6-210ENST00000635747 MCM9Q9NXL9 1143 aa22.05■■□□□ 1.12
CLN6-210ENST00000635747 ZBTB21Q9ULJ3 1066 aa22.05■■□□□ 1.12
CLN6-210ENST00000635747 PHIPQ8WWQ0 1821 aa22.04■■□□□ 1.12
CLN6-210ENST00000635747 USP17L10C9JJH3 530 aa22.04■■□□□ 1.12
CLN6-210ENST00000635747 GDF11O95390 407 aa22.04■■□□□ 1.12
CLN6-210ENST00000635747 CERKLQ49MI3 558 aaPredicted RBP22.04■■□□□ 1.12
CLN6-210ENST00000635747 SLC9C1Q4G0N8 1177 aa22.04■■□□□ 1.12
CLN6-210ENST00000635747 LCORLQ8N3X6 602 aa22.04■■□□□ 1.12
CLN6-210ENST00000635747 DCP1AQ9NPI6 582 aaPredicted RBP22.04■■□□□ 1.12
CLN6-210ENST00000635747 ZBTB47Q9UFB7 747 aaPredicted RBP22.04■■□□□ 1.12
CLN6-210ENST00000635747 PTCH2Q9Y6C5 1203 aa22.04■■□□□ 1.12
CLN6-210ENST00000635747 GCLCP48506 637 aaPredicted RBP22.03■■□□□ 1.12
CLN6-210ENST00000635747 PLCD1P51178 756 aa22.03■■□□□ 1.12
CLN6-210ENST00000635747 FCGRTP55899 365 aa22.03■■□□□ 1.12
CLN6-210ENST00000635747 MTMR2Q13614 643 aa22.03■■□□□ 1.12
CLN6-210ENST00000635747 TREML2Q5T2D2 321 aa22.03■■□□□ 1.12
CLN6-210ENST00000635747 DDRGK1Q96HY6 314 aa22.03■■□□□ 1.12
CLN6-210ENST00000635747 TRIM47Q96LD4 638 aa22.03■■□□□ 1.12
CLN6-210ENST00000635747 CRBNQ96SW2 442 aa22.03■■□□□ 1.12
CLN6-210ENST00000635747 ARMT1Q9H993 441 aa22.03■■□□□ 1.12
CLN6-210ENST00000635747 CABP5Q9NP86 173 aa22.03■■□□□ 1.12
CLN6-210ENST00000635747 SRRDQ9UH36 339 aa22.03■■□□□ 1.12
CLN6-210ENST00000635747 SIPA1L1O43166 1804 aa22.03■■□□□ 1.12
CLN6-210ENST00000635747 ERC2O15083 957 aa22.02■■□□□ 1.12
CLN6-210ENST00000635747 MBD4O95243 580 aa22.02■■□□□ 1.12
CLN6-210ENST00000635747 GH2P01242 217 aa22.02■■□□□ 1.12
CLN6-210ENST00000635747 JAG1P78504 1218 aa22.02■■□□□ 1.12
CLN6-210ENST00000635747 LRRFIP1Q32MZ4 808 aaKnown RBP22.02■■□□□ 1.12
CLN6-210ENST00000635747 AMOTL1Q8IY63 956 aa22.02■■□□□ 1.12
CLN6-210ENST00000635747 SDR42E1Q8WUS8 393 aa22.02■■□□□ 1.12
CLN6-210ENST00000635747 TTC41PQ6P2S7 1318 aa22.02■■□□□ 1.12
CLN6-210ENST00000635747 MYH1P12882 1939 aa22.02■■□□□ 1.11
CLN6-210ENST00000635747 ABCB5Q2M3G0 1257 aa22.01■■□□□ 1.11
CLN6-210ENST00000635747 KBTBD3Q8NAB2 608 aa22.01■■□□□ 1.11
CLN6-210ENST00000635747 PTPRFP10586 1907 aa22■■□□□ 1.11
CLN6-210ENST00000635747 ZFYP08048 801 aaPredicted RBP22■■□□□ 1.11
CLN6-210ENST00000635747 HOXA7P31268 230 aaPredicted RBP22■■□□□ 1.11
CLN6-210ENST00000635747 GABPAQ06546 454 aa22■■□□□ 1.11
CLN6-210ENST00000635747 FAM110CQ1W6H9 321 aa22■■□□□ 1.11
CLN6-210ENST00000635747 USP17L2Q6R6M4 530 aa22■■□□□ 1.11
CLN6-210ENST00000635747 GCC1Q96CN9 775 aa22■■□□□ 1.11
CLN6-210ENST00000635747 ZNF333Q96JL9 665 aa22■■□□□ 1.11
CLN6-210ENST00000635747 TMEM106CQ9BVX2 250 aa22■■□□□ 1.11
CLN6-210ENST00000635747 ASCC2Q9H1I8 757 aaPredicted RBP22■■□□□ 1.11
CLN6-210ENST00000635747 SWAP70Q9UH65 585 aa22■■□□□ 1.11
CLN6-210ENST00000635747 ATAD5Q96QE3 1844 aa22■■□□□ 1.11
CLN6-210ENST00000635747 CTGFP29279 349 aa21.99■■□□□ 1.11
CLN6-210ENST00000635747 SHMT1P34896 483 aa21.99■■□□□ 1.11
CLN6-210ENST00000635747 USP14P54578 494 aa21.99■■□□□ 1.11
CLN6-210ENST00000635747 IRX3P78415 501 aaPredicted RBP21.99■■□□□ 1.11
CLN6-210ENST00000635747 ANKRD13CQ8N6S4 541 aa21.99■■□□□ 1.11
CLN6-210ENST00000635747 RAET1EQ8TD07 263 aa21.99■■□□□ 1.11
CLN6-210ENST00000635747 GLRX3O76003 335 aaKnown RBP21.98■■□□□ 1.11
CLN6-210ENST00000635747 HDAC1Q13547 482 aaPredicted RBP21.98■■□□□ 1.11
CLN6-210ENST00000635747 RAB3GAP1Q15042 981 aa21.98■■□□□ 1.11
CLN6-210ENST00000635747 SHROOM1Q2M3G4 852 aaPredicted RBP21.98■■□□□ 1.11
CLN6-210ENST00000635747 MYPNQ86TC9 1320 aa21.98■■□□□ 1.11
CLN6-210ENST00000635747 PRKAB2O43741 272 aa21.97■■□□□ 1.11
CLN6-210ENST00000635747 ECM2O94769 699 aaPredicted RBP21.97■■□□□ 1.11
CLN6-210ENST00000635747 SLFNL1Q499Z3 407 aa21.97■■□□□ 1.11
CLN6-210ENST00000635747 FEZ1Q99689 392 aa21.97■■□□□ 1.11
CLN6-210ENST00000635747 PUS7LQ9H0K6 701 aaKnown RBP21.97■■□□□ 1.11
CLN6-210ENST00000635747 SLC4A4Q9Y6R1 1079 aa21.97■■□□□ 1.11
CLN6-210ENST00000635747 TNRC18O15417 2968 aaPredicted RBP21.97■■□□□ 1.11
CLN6-210ENST00000635747 TNPO2O14787 897 aaKnown RBP21.96■■□□□ 1.11
CLN6-210ENST00000635747 TSHZ3Q63HK5 1081 aa21.96■■□□□ 1.11
CLN6-210ENST00000635747 GTF3C2Q8WUA4 911 aaPredicted RBP21.96■■□□□ 1.11
CLN6-210ENST00000635747 APPBP2Q92624 585 aa21.96■■□□□ 1.11
CLN6-210ENST00000635747 COA7Q96BR5 231 aa21.96■■□□□ 1.11
CLN6-210ENST00000635747 C12orf42Q96LP6 360 aa21.96■■□□□ 1.11
CLN6-210ENST00000635747 KIAA1683Q9H0B3 1180 aa21.96■■□□□ 1.11
CLN6-210ENST00000635747 LOC285556D6RIA3 1793 aa21.96■■□□□ 1.11
CLN6-210ENST00000635747 RNF113AO15541 343 aaKnown RBP21.95■■□□□ 1.1
CLN6-210ENST00000635747 MX1P20591 662 aa21.95■■□□□ 1.1
CLN6-210ENST00000635747 GRK4P32298 578 aa21.95■■□□□ 1.1
CLN6-210ENST00000635747 ANKRD45Q5TZF3 282 aa21.95■■□□□ 1.1
CLN6-210ENST00000635747 C12orf60Q5U649 245 aa21.95■■□□□ 1.1
CLN6-210ENST00000635747 GIMAP6Q6P9H5 292 aa21.95■■□□□ 1.1
CLN6-210ENST00000635747 EMILIN3Q9NT22 766 aa21.95■■□□□ 1.1
CLN6-210ENST00000635747 USP17L12C9JPN9 530 aa21.94■■□□□ 1.1
CLN6-210ENST00000635747 USP17L21D6R901 530 aa21.94■■□□□ 1.1
CLN6-210ENST00000635747 MPHOSPH10O00566 681 aaKnown RBP21.94■■□□□ 1.1
CLN6-210ENST00000635747 PRKCZQ05513 592 aa21.94■■□□□ 1.1
CLN6-210ENST00000635747 TMEM179Q6ZVK1 233 aa21.94■■□□□ 1.1
CLN6-210ENST00000635747 SH3TC2Q8TF17 1288 aa21.94■■□□□ 1.1
CLN6-210ENST00000635747 CCDC17Q96LX7 622 aa21.94■■□□□ 1.1
CLN6-210ENST00000635747 STRBPQ96SI9 672 aaKnown RBP21.94■■□□□ 1.1
CLN6-210ENST00000635747 MORF4L1Q9UBU8 362 aa21.94■■□□□ 1.1
CLN6-210ENST00000635747 NAV1Q8NEY1 1877 aa21.94■■□□□ 1.1
CLN6-210ENST00000635747 POTEFA5A3E0 1075 aa21.93■■□□□ 1.1
CLN6-210ENST00000635747 USP17L15C9J2P7 530 aa21.93■■□□□ 1.1
CLN6-210ENST00000635747 USP17L13C9JLJ4 530 aa21.93■■□□□ 1.1
CLN6-210ENST00000635747 USP17L11C9JVI0 530 aa21.93■■□□□ 1.1
CLN6-210ENST00000635747 USP17L18D6R9N7 530 aa21.93■■□□□ 1.1
CLN6-210ENST00000635747 USP17L22D6RA61 530 aa21.93■■□□□ 1.1
CLN6-210ENST00000635747 USP17L17D6RBQ6 530 aa21.93■■□□□ 1.1
CLN6-210ENST00000635747 USP17L19D6RCP7 530 aa21.93■■□□□ 1.1
CLN6-210ENST00000635747 USP17L20D6RJB6 530 aa21.93■■□□□ 1.1
CLN6-210ENST00000635747 CHGBP05060 677 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms