RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 C1orf115Q9H7X2 142 aa4.56□□□□□ -1.68
SMARCB1-208ENST00000634926 TMEM39AQ9NV64 488 aa4.56□□□□□ -1.68
SMARCB1-208ENST00000634926 RTEL1Q9NZ71 1219 aa4.56□□□□□ -1.68
SMARCB1-208ENST00000634926 MAPK8IP1Q9UQF2 711 aa4.56□□□□□ -1.68
SMARCB1-208ENST00000634926 CARNS1A5YM72 827 aa4.55□□□□□ -1.68
SMARCB1-208ENST00000634926 FAM155AB1AL88 458 aaPredicted RBP4.55□□□□□ -1.68
SMARCB1-208ENST00000634926 IGHA2P01877 340 aa4.55□□□□□ -1.68
SMARCB1-208ENST00000634926 HPXP02790 462 aa4.55□□□□□ -1.68
SMARCB1-208ENST00000634926 ARNTP27540 789 aa4.55□□□□□ -1.68
SMARCB1-208ENST00000634926 SSPNQ14714 243 aa4.55□□□□□ -1.68
SMARCB1-208ENST00000634926 TIGD5Q53EQ6 642 aa4.55□□□□□ -1.68
SMARCB1-208ENST00000634926 ZBTB37Q5TC79 503 aa4.55□□□□□ -1.68
SMARCB1-208ENST00000634926 RASIP1Q5U651 963 aa4.55□□□□□ -1.68
SMARCB1-208ENST00000634926 PI16Q6UXB8 463 aa4.55□□□□□ -1.68
SMARCB1-208ENST00000634926 PRRT2Q7Z6L0 340 aaPredicted RBP4.55□□□□□ -1.68
SMARCB1-208ENST00000634926 MYLIPQ8WY64 445 aa4.55□□□□□ -1.68
SMARCB1-208ENST00000634926 TMPRSS5Q9H3S3 457 aa4.55□□□□□ -1.68
SMARCB1-208ENST00000634926 FBRSQ9HAH7 460 aa4.55□□□□□ -1.68
SMARCB1-208ENST00000634926 GPN3Q9UHW5 284 aaPredicted RBP4.55□□□□□ -1.68
SMARCB1-208ENST00000634926 OTOL1A6NHN0 477 aaPredicted RBP4.54□□□□□ -1.68
SMARCB1-208ENST00000634926 CPNE3O75131 537 aaKnown RBP4.54□□□□□ -1.68
SMARCB1-208ENST00000634926 GADD45BO75293 160 aaPredicted RBP4.54□□□□□ -1.68
SMARCB1-208ENST00000634926 C22orf34Q6ZV56 151 aa4.54□□□□□ -1.68
SMARCB1-208ENST00000634926 MFSD4AQ8N468 514 aa4.54□□□□□ -1.68
SMARCB1-208ENST00000634926 CXorf38Q8TB03 319 aa4.54□□□□□ -1.68
SMARCB1-208ENST00000634926 ZSWIM5Q9P217 1185 aa4.54□□□□□ -1.68
SMARCB1-208ENST00000634926 EIF1AYO14602 144 aaKnown RBP4.53□□□□□ -1.68
SMARCB1-208ENST00000634926 ABL1P00519 1130 aa4.53□□□□□ -1.68
SMARCB1-208ENST00000634926 FCGRTP55899 365 aa4.53□□□□□ -1.68
SMARCB1-208ENST00000634926 SF3B2Q13435 895 aaKnown RBP4.53□□□□□ -1.68
SMARCB1-208ENST00000634926 SLBPQ14493 270 aaKnown RBP eCLIP4.53□□□□□ -1.68
SMARCB1-208ENST00000634926 NKG7Q16617 165 aa4.53□□□□□ -1.68
SMARCB1-208ENST00000634926 TMEM59LQ9UK28 342 aa4.53□□□□□ -1.68
SMARCB1-208ENST00000634926 ARID3CA6NKF2 412 aa4.52□□□□□ -1.69
SMARCB1-208ENST00000634926 PAGE1O75459 146 aa4.52□□□□□ -1.69
SMARCB1-208ENST00000634926 CBX7O95931 251 aa4.52□□□□□ -1.69
SMARCB1-208ENST00000634926 BMP6P22004 513 aa4.52□□□□□ -1.69
SMARCB1-208ENST00000634926 KRTAP1-1Q07627 177 aa4.52□□□□□ -1.69
SMARCB1-208ENST00000634926 SFRP5Q5T4F7 317 aa4.52□□□□□ -1.69
SMARCB1-208ENST00000634926 ZNF605Q86T29 641 aa4.52□□□□□ -1.69
SMARCB1-208ENST00000634926 KCTD3Q9Y597 815 aa4.52□□□□□ -1.69
SMARCB1-208ENST00000634926 GPR182O15218 404 aa4.51□□□□□ -1.69
SMARCB1-208ENST00000634926 FANCGO15287 622 aa4.51□□□□□ -1.69
SMARCB1-208ENST00000634926 LRIG2O94898 1065 aa4.51□□□□□ -1.69
SMARCB1-208ENST00000634926 RAC2P15153 192 aa4.51□□□□□ -1.69
SMARCB1-208ENST00000634926 NME2P22392 152 aa4.51□□□□□ -1.69
SMARCB1-208ENST00000634926 PPP2R3AQ06190 1150 aa4.51□□□□□ -1.69
SMARCB1-208ENST00000634926 TNK2Q07912 1038 aa4.51□□□□□ -1.69
SMARCB1-208ENST00000634926 INPP5AQ14642 412 aa4.51□□□□□ -1.69
SMARCB1-208ENST00000634926 DTHD1Q6ZMT9 781 aa4.51□□□□□ -1.69
SMARCB1-208ENST00000634926 FEZF2Q8TBJ5 459 aa4.51□□□□□ -1.69
SMARCB1-208ENST00000634926 ACSBG1Q96GR2 724 aa4.51□□□□□ -1.69
SMARCB1-208ENST00000634926 FAM129BQ96TA1 746 aa4.51□□□□□ -1.69
SMARCB1-208ENST00000634926 MIPEPQ99797 713 aa4.51□□□□□ -1.69
SMARCB1-208ENST00000634926 CNOT6Q9ULM6 557 aaKnown RBP4.51□□□□□ -1.69
SMARCB1-208ENST00000634926 TPX2Q9ULW0 747 aaKnown RBP4.51□□□□□ -1.69
SMARCB1-208ENST00000634926 HMGXB3Q12766 1538 aa4.51□□□□□ -1.69
SMARCB1-208ENST00000634926 PEG3Q9GZU2 1588 aa4.5□□□□□ -1.69
SMARCB1-208ENST00000634926 EFEMP2O95967 443 aa4.5□□□□□ -1.69
SMARCB1-208ENST00000634926 GALK1P51570 392 aa4.5□□□□□ -1.69
SMARCB1-208ENST00000634926 ARHGAP4P98171 946 aa4.5□□□□□ -1.69
SMARCB1-208ENST00000634926 PTPN11Q06124 597 aaPredicted RBP4.5□□□□□ -1.69
SMARCB1-208ENST00000634926 TCERG1LQ5VWI1 586 aa4.5□□□□□ -1.69
SMARCB1-208ENST00000634926 THAP5Q7Z6K1 395 aa4.5□□□□□ -1.69
SMARCB1-208ENST00000634926 ARID3AQ99856 593 aa4.5□□□□□ -1.69
SMARCB1-208ENST00000634926 NIF3L1Q9GZT8 377 aa4.5□□□□□ -1.69
SMARCB1-208ENST00000634926 CBX8Q9HC52 389 aa4.5□□□□□ -1.69
SMARCB1-208ENST00000634926 EPB41L4AQ9HCS5 686 aaPredicted RBP4.5□□□□□ -1.69
SMARCB1-208ENST00000634926 NCAPD3P42695 1498 aa4.49□□□□□ -1.69
SMARCB1-208ENST00000634926 ADRB1P08588 477 aa4.49□□□□□ -1.69
SMARCB1-208ENST00000634926 VMACQ2NL98 169 aa4.49□□□□□ -1.69
SMARCB1-208ENST00000634926 ZDHHC14Q8IZN3 488 aa4.49□□□□□ -1.69
SMARCB1-208ENST00000634926 SYT8Q8NBV8 401 aa4.49□□□□□ -1.69
SMARCB1-208ENST00000634926 EBF1Q9UH73 591 aa4.49□□□□□ -1.69
SMARCB1-208ENST00000634926 BRPF3Q9ULD4 1205 aa4.49□□□□□ -1.69
SMARCB1-208ENST00000634926 TRAK1Q9UPV9 953 aa4.49□□□□□ -1.69
SMARCB1-208ENST00000634926 SMARCA4P51532 1647 aa4.49□□□□□ -1.69
SMARCB1-208ENST00000634926 CUX2O14529 1486 aa4.49□□□□□ -1.69
SMARCB1-208ENST00000634926 ENC1O14682 589 aa4.48□□□□□ -1.69
SMARCB1-208ENST00000634926 PEX10O60683 326 aa4.48□□□□□ -1.69
SMARCB1-208ENST00000634926 ICMTO60725 284 aa4.48□□□□□ -1.69
SMARCB1-208ENST00000634926 ZGLP1P0C6A0 271 aa4.48□□□□□ -1.69
SMARCB1-208ENST00000634926 PI3P19957 117 aa4.48□□□□□ -1.69
SMARCB1-208ENST00000634926 CDK8P49336 464 aa4.48□□□□□ -1.69
SMARCB1-208ENST00000634926 LRFN4Q6PJG9 635 aa4.48□□□□□ -1.69
SMARCB1-208ENST00000634926 CDC37L1Q7L3B6 337 aa4.48□□□□□ -1.69
SMARCB1-208ENST00000634926 C3orf58Q8NDZ4 430 aa4.48□□□□□ -1.69
SMARCB1-208ENST00000634926 SHISA4Q96DD7 197 aa4.48□□□□□ -1.69
SMARCB1-208ENST00000634926 CCDC120Q96HB5 630 aa4.48□□□□□ -1.69
SMARCB1-208ENST00000634926 NECAB3Q96P71 396 aaPredicted RBP4.48□□□□□ -1.69
SMARCB1-208ENST00000634926 DUSP15Q9H1R2 295 aaPredicted RBP4.48□□□□□ -1.69
SMARCB1-208ENST00000634926 ADAM7Q9H2U9 754 aa4.48□□□□□ -1.69
SMARCB1-208ENST00000634926 ZNF552Q9H707 407 aaPredicted RBP4.48□□□□□ -1.69
SMARCB1-208ENST00000634926 PICK1Q9NRD5 415 aa4.48□□□□□ -1.69
SMARCB1-208ENST00000634926 THOC2Q8NI27 1593 aaKnown RBP4.48□□□□□ -1.69
SMARCB1-208ENST00000634926 TEX51A0A1B0GUA7 166 aa4.47□□□□□ -1.69
SMARCB1-208ENST00000634926 SEMA7AO75326 666 aa4.47□□□□□ -1.69
SMARCB1-208ENST00000634926 CELA3BP08861 270 aa4.47□□□□□ -1.69
SMARCB1-208ENST00000634926 GAB4Q2WGN9 574 aa4.47□□□□□ -1.69
SMARCB1-208ENST00000634926 LETMD1Q6P1Q0 360 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms