RNA–Protein interactions for RNA: ENST00000632897.1

LIMS4-204, Transcript of LIM zinc finger domain containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS4, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-204ENST00000632897 PRDM1O75626 825 aa16.54■□□□□ 0.24
LIMS4-204ENST00000632897 FKBP1AP62942 108 aaKnown RBP16.54■□□□□ 0.24
LIMS4-204ENST00000632897 GUCY1B3Q02153 619 aa16.54■□□□□ 0.24
LIMS4-204ENST00000632897 TRIM29Q14134 588 aa16.54■□□□□ 0.24
LIMS4-204ENST00000632897 DCAF8Q5TAQ9 597 aa16.54■□□□□ 0.24
LIMS4-204ENST00000632897 OLFM4Q6UX06 510 aa16.54■□□□□ 0.24
LIMS4-204ENST00000632897 PODNQ7Z5L7 613 aa16.54■□□□□ 0.24
LIMS4-204ENST00000632897 CCDC144CPQ8IYA2 1237 aa16.54■□□□□ 0.24
LIMS4-204ENST00000632897 ZNF287Q9HBT7 754 aa16.54■□□□□ 0.24
LIMS4-204ENST00000632897 RCOR1Q9UKL0 485 aa16.54■□□□□ 0.24
LIMS4-204ENST00000632897 CDK5RAP2Q96SN8 1893 aa16.54■□□□□ 0.24
LIMS4-204ENST00000632897 GOLGA6L4A6NEF3 574 aa16.54■□□□□ 0.24
LIMS4-204ENST00000632897 RHBDL3P58872 404 aa16.54■□□□□ 0.24
LIMS4-204ENST00000632897 GRIPAP1Q4V328 841 aa16.54■□□□□ 0.24
LIMS4-204ENST00000632897 PHKBQ93100 1093 aa16.54■□□□□ 0.24
LIMS4-204ENST00000632897 SLC26A6Q9BXS9 759 aa16.54■□□□□ 0.24
LIMS4-204ENST00000632897 DAGLAQ9Y4D2 1042 aa16.54■□□□□ 0.24
LIMS4-204ENST00000632897 FOCADQ5VW36 1801 aa16.53■□□□□ 0.24
LIMS4-204ENST00000632897 SLX4Q8IY92 1834 aa16.53■□□□□ 0.24
LIMS4-204ENST00000632897 SYCE3A1L190 88 aa16.53■□□□□ 0.24
LIMS4-204ENST00000632897 TSPY2A6NKD2 308 aa16.53■□□□□ 0.24
LIMS4-204ENST00000632897 POLR3DP05423 398 aaPredicted RBP16.53■□□□□ 0.24
LIMS4-204ENST00000632897 KCNA3P22001 575 aa16.53■□□□□ 0.24
LIMS4-204ENST00000632897 KIF23Q02241 960 aaPredicted RBP16.53■□□□□ 0.24
LIMS4-204ENST00000632897 CRACR2BQ8N4Y2 399 aaPredicted RBP16.53■□□□□ 0.24
LIMS4-204ENST00000632897 NUP133Q8WUM0 1156 aa16.53■□□□□ 0.24
LIMS4-204ENST00000632897 TCP11L1Q9NUJ3 509 aa16.53■□□□□ 0.24
LIMS4-204ENST00000632897 FLT1P17948 1338 aa16.52■□□□□ 0.24
LIMS4-204ENST00000632897 DEXIO95424 95 aa16.52■□□□□ 0.23
LIMS4-204ENST00000632897 EVX2Q03828 476 aa16.52■□□□□ 0.23
LIMS4-204ENST00000632897 DOK7Q18PE1 504 aa16.52■□□□□ 0.23
LIMS4-204ENST00000632897 KRT40Q6A162 431 aa16.52■□□□□ 0.23
LIMS4-204ENST00000632897 HHIPL2Q6UWX4 724 aa16.52■□□□□ 0.23
LIMS4-204ENST00000632897 NBPF11Q86T75 865 aa16.52■□□□□ 0.23
LIMS4-204ENST00000632897 MAPKAPK5Q8IW41 473 aa16.52■□□□□ 0.23
LIMS4-204ENST00000632897 SUPT20HQ8NEM7 779 aa16.52■□□□□ 0.23
LIMS4-204ENST00000632897 C7orf43Q8WVR3 580 aa16.52■□□□□ 0.23
LIMS4-204ENST00000632897 ANKS1AQ92625 1134 aa16.52■□□□□ 0.23
LIMS4-204ENST00000632897 FBXW7Q969H0 707 aa16.52■□□□□ 0.23
LIMS4-204ENST00000632897 RNF26Q9BY78 433 aaPredicted RBP16.52■□□□□ 0.23
LIMS4-204ENST00000632897 RTEL1Q9NZ71 1219 aa16.52■□□□□ 0.23
LIMS4-204ENST00000632897 HSPA6P17066 643 aa16.51■□□□□ 0.23
LIMS4-204ENST00000632897 CHRNA5P30532 468 aa16.51■□□□□ 0.23
LIMS4-204ENST00000632897 TROAPQ12815 778 aa16.51■□□□□ 0.23
LIMS4-204ENST00000632897 OTUD7BQ6GQQ9 843 aa16.51■□□□□ 0.23
LIMS4-204ENST00000632897 DGKHQ86XP1 1220 aa16.51■□□□□ 0.23
LIMS4-204ENST00000632897 CERS5Q8N5B7 392 aa16.51■□□□□ 0.23
LIMS4-204ENST00000632897 USP28Q96RU2 1077 aa16.51■□□□□ 0.23
LIMS4-204ENST00000632897 MKNK2Q9HBH9 465 aa16.51■□□□□ 0.23
LIMS4-204ENST00000632897 SNED1Q8TER0 1413 aa16.5■□□□□ 0.23
LIMS4-204ENST00000632897 ZC3H4Q9UPT8 1303 aaKnown RBP16.5■□□□□ 0.23
LIMS4-204ENST00000632897 YEATS4O95619 227 aa16.5■□□□□ 0.23
LIMS4-204ENST00000632897 FAM47AQ5JRC9 791 aa16.5■□□□□ 0.23
LIMS4-204ENST00000632897 MYSM1Q5VVJ2 828 aa16.5■□□□□ 0.23
LIMS4-204ENST00000632897 C9orf131Q5VYM1 1079 aa16.5■□□□□ 0.23
LIMS4-204ENST00000632897 C16orf86Q6ZW13 317 aa16.5■□□□□ 0.23
LIMS4-204ENST00000632897 MAP3K14Q99558 947 aa16.5■□□□□ 0.23
LIMS4-204ENST00000632897 MRIQ9BWK5 157 aa16.5■□□□□ 0.23
LIMS4-204ENST00000632897 TSPY26PQ9H489 355 aa16.5■□□□□ 0.23
LIMS4-204ENST00000632897 DDX19AQ9NUU7 478 aaKnown RBP16.5■□□□□ 0.23
LIMS4-204ENST00000632897 POLR3EQ9NVU0 708 aa16.5■□□□□ 0.23
LIMS4-204ENST00000632897 TTF2Q9UNY4 1162 aaKnown RBP16.5■□□□□ 0.23
LIMS4-204ENST00000632897 TFAP4Q01664 338 aa16.49■□□□□ 0.23
LIMS4-204ENST00000632897 AKAP17AQ02040 695 aaKnown RBP16.49■□□□□ 0.23
LIMS4-204ENST00000632897 STRIP1Q5VSL9 837 aa16.49■□□□□ 0.23
LIMS4-204ENST00000632897 ZNF444Q8N0Y2 327 aaPredicted RBP16.49■□□□□ 0.23
LIMS4-204ENST00000632897 CTCFLQ8NI51 663 aaPredicted RBP16.49■□□□□ 0.23
LIMS4-204ENST00000632897 DYNLL2Q96FJ2 89 aa16.49■□□□□ 0.23
LIMS4-204ENST00000632897 PGBD1Q96JS3 809 aa16.49■□□□□ 0.23
LIMS4-204ENST00000632897 AIFM3Q96NN9 605 aa16.49■□□□□ 0.23
LIMS4-204ENST00000632897 SAP30BPQ9UHR5 308 aaKnown RBP16.49■□□□□ 0.23
LIMS4-204ENST00000632897 KIF28PB7ZC32 967 aa16.48■□□□□ 0.23
LIMS4-204ENST00000632897 KIF3CO14782 793 aa16.48■□□□□ 0.23
LIMS4-204ENST00000632897 PRPF3O43395 683 aaKnown RBP16.48■□□□□ 0.23
LIMS4-204ENST00000632897 TOMM70O94826 608 aa16.48■□□□□ 0.23
LIMS4-204ENST00000632897 U2AF2P26368 475 aaKnown RBP eCLIP16.48■□□□□ 0.23
LIMS4-204ENST00000632897 NASPP49321 788 aaPredicted RBP16.48■□□□□ 0.23
LIMS4-204ENST00000632897 PLCD1P51178 756 aa16.48■□□□□ 0.23
LIMS4-204ENST00000632897 HDLBPQ00341 1268 aaKnown RBP16.48■□□□□ 0.23
LIMS4-204ENST00000632897 SAFBQ15424 915 aaKnown RBP eCLIP16.48■□□□□ 0.23
LIMS4-204ENST00000632897 TMTC3Q6ZXV5 915 aa16.48■□□□□ 0.23
LIMS4-204ENST00000632897 TTLL6Q8N841 843 aa16.48■□□□□ 0.23
LIMS4-204ENST00000632897 BICD2Q8TD16 824 aa16.48■□□□□ 0.23
LIMS4-204ENST00000632897 KCNG4Q8TDN1 519 aa16.48■□□□□ 0.23
LIMS4-204ENST00000632897 TEKT1Q969V4 418 aa16.48■□□□□ 0.23
LIMS4-204ENST00000632897 RNF181Q9P0P0 153 aa16.48■□□□□ 0.23
LIMS4-204ENST00000632897 MYH1P12882 1939 aa16.48■□□□□ 0.23
LIMS4-204ENST00000632897 SBF1O95248 1867 aa16.48■□□□□ 0.23
LIMS4-204ENST00000632897 ECE2O60344 883 aa16.48■□□□□ 0.23
LIMS4-204ENST00000632897 MMP1P03956 469 aa16.48■□□□□ 0.23
LIMS4-204ENST00000632897 TSPY3P0CV98 308 aa16.48■□□□□ 0.23
LIMS4-204ENST00000632897 TSPY8P0CW00 308 aa16.48■□□□□ 0.23
LIMS4-204ENST00000632897 XBP1P17861 261 aa16.48■□□□□ 0.23
LIMS4-204ENST00000632897 RASA1P20936 1047 aa16.48■□□□□ 0.23
LIMS4-204ENST00000632897 KIF5BP33176 963 aa16.48■□□□□ 0.23
LIMS4-204ENST00000632897 KIAA2012Q0VF49 1180 aa16.48■□□□□ 0.23
LIMS4-204ENST00000632897 FUT2Q10981 343 aa16.48■□□□□ 0.23
LIMS4-204ENST00000632897 GNL2Q13823 731 aaKnown RBP16.48■□□□□ 0.23
LIMS4-204ENST00000632897 RCSD1Q6JBY9 416 aa16.48■□□□□ 0.23
LIMS4-204ENST00000632897 KAT14Q9H8E8 782 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms