RNA–Protein interactions for RNA: ENST00000629346.2

CHD2-218, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene CHD2, Length 1,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-218ENST00000629346 TRIM43BA6NCK2 446 aa14.87□□□□□ -0.03
CHD2-218ENST00000629346 HOXA7P31268 230 aaPredicted RBP14.87□□□□□ -0.03
CHD2-218ENST00000629346 MAP2K5Q13163 448 aa14.87□□□□□ -0.03
CHD2-218ENST00000629346 NCBP3Q53F19 620 aaKnown RBP14.87□□□□□ -0.03
CHD2-218ENST00000629346 WDR78Q5VTH9 848 aa14.87□□□□□ -0.03
CHD2-218ENST00000629346 ATXN2LQ8WWM7 1075 aaKnown RBP14.87□□□□□ -0.03
CHD2-218ENST00000629346 TRIM43Q96BQ3 446 aaPredicted RBP14.87□□□□□ -0.03
CHD2-218ENST00000629346 ABCF2Q9UG63 623 aa14.87□□□□□ -0.03
CHD2-218ENST00000629346 DENND2AQ9ULE3 1009 aa14.87□□□□□ -0.03
CHD2-218ENST00000629346 MYH2Q9UKX2 1941 aa14.87□□□□□ -0.03
CHD2-218ENST00000629346 BDP1A6H8Y1 2624 aa14.87□□□□□ -0.03
CHD2-218ENST00000629346 CACNA1FO60840 1977 aa14.87□□□□□ -0.03
CHD2-218ENST00000629346 SALL1Q9NSC2 1324 aa14.87□□□□□ -0.03
CHD2-218ENST00000629346 FRMPD3Q5JV73 1810 aa14.87□□□□□ -0.03
CHD2-218ENST00000629346 EYA2O00167 538 aa14.86□□□□□ -0.03
CHD2-218ENST00000629346 MSCO60682 206 aa14.86□□□□□ -0.03
CHD2-218ENST00000629346 DNAJB2P25686 324 aa14.86□□□□□ -0.03
CHD2-218ENST00000629346 CYP2C19P33261 490 aa14.86□□□□□ -0.03
CHD2-218ENST00000629346 PHKA1P46020 1223 aa14.86□□□□□ -0.03
CHD2-218ENST00000629346 BACE1P56817 501 aa14.86□□□□□ -0.03
CHD2-218ENST00000629346 ATP2B2Q01814 1243 aa14.86□□□□□ -0.03
CHD2-218ENST00000629346 ANO1Q5XXA6 986 aa14.86□□□□□ -0.03
CHD2-218ENST00000629346 ZNF576Q9H609 170 aa14.86□□□□□ -0.03
CHD2-218ENST00000629346 PDLIM7Q9NR12 457 aa14.86□□□□□ -0.03
CHD2-218ENST00000629346 KBTBD13C9JR72 458 aa14.85□□□□□ -0.03
CHD2-218ENST00000629346 EPHB4P54760 987 aa14.85□□□□□ -0.03
CHD2-218ENST00000629346 CCDC85BQ15834 202 aaPredicted RBP14.85□□□□□ -0.03
CHD2-218ENST00000629346 ATP2B3Q16720 1220 aa14.85□□□□□ -0.03
CHD2-218ENST00000629346 CCDC27Q2M243 656 aa14.85□□□□□ -0.03
CHD2-218ENST00000629346 POTEEQ6S8J3 1075 aa14.85□□□□□ -0.03
CHD2-218ENST00000629346 SLF2Q8IX21 1173 aa14.85□□□□□ -0.03
CHD2-218ENST00000629346 ARRDC4Q8NCT1 418 aa14.85□□□□□ -0.03
CHD2-218ENST00000629346 TRPV1Q8NER1 839 aa14.85□□□□□ -0.03
CHD2-218ENST00000629346 IL27Q8NEV9 243 aa14.85□□□□□ -0.03
CHD2-218ENST00000629346 FERMT2Q96AC1 680 aa14.85□□□□□ -0.03
CHD2-218ENST00000629346 THEGQ9P2T0 379 aa14.85□□□□□ -0.03
CHD2-218ENST00000629346 UTYO14607 1347 aa14.85□□□□□ -0.03
CHD2-218ENST00000629346 IL16Q14005 1332 aa14.85□□□□□ -0.03
CHD2-218ENST00000629346 ITGB8P26012 769 aa14.84□□□□□ -0.03
CHD2-218ENST00000629346 ADCYAP1R1P41586 468 aa14.84□□□□□ -0.03
CHD2-218ENST00000629346 RHBDL3P58872 404 aa14.84□□□□□ -0.03
CHD2-218ENST00000629346 MRPS5P82675 430 aaKnown RBP14.84□□□□□ -0.03
CHD2-218ENST00000629346 ZGPATQ8N5A5 531 aaKnown RBP14.84□□□□□ -0.03
CHD2-218ENST00000629346 GAS2L1Q99501 681 aaPredicted RBP14.84□□□□□ -0.03
CHD2-218ENST00000629346 WDR18Q9BV38 432 aa14.84□□□□□ -0.03
CHD2-218ENST00000629346 SIL1Q9H173 461 aa14.84□□□□□ -0.03
CHD2-218ENST00000629346 ATAD5Q96QE3 1844 aa14.84□□□□□ -0.03
CHD2-218ENST00000629346 MROH7-TTC4A0A0A0MT08 1334 aa14.84□□□□□ -0.03
CHD2-218ENST00000629346 GLRX3O76003 335 aaKnown RBP14.83□□□□□ -0.04
CHD2-218ENST00000629346 ATG9AQ7Z3C6 839 aa14.83□□□□□ -0.04
CHD2-218ENST00000629346 TIFAQ96CG3 184 aa14.83□□□□□ -0.04
CHD2-218ENST00000629346 FAM163AQ96GL9 167 aaPredicted RBP14.83□□□□□ -0.04
CHD2-218ENST00000629346 NECAB3Q96P71 396 aaPredicted RBP14.83□□□□□ -0.04
CHD2-218ENST00000629346 SALL2Q9Y467 1007 aaPredicted RBP14.83□□□□□ -0.04
CHD2-218ENST00000629346 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.82□□□□□ -0.04
CHD2-218ENST00000629346 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.82□□□□□ -0.04
CHD2-218ENST00000629346 C19orf81C9J6K1 198 aa14.82□□□□□ -0.04
CHD2-218ENST00000629346 SEMA3EO15041 775 aa14.82□□□□□ -0.04
CHD2-218ENST00000629346 PTPREP23469 700 aa14.82□□□□□ -0.04
CHD2-218ENST00000629346 JAG1P78504 1218 aa14.82□□□□□ -0.04
CHD2-218ENST00000629346 TLE2Q04725 743 aa14.82□□□□□ -0.04
CHD2-218ENST00000629346 SHROOM1Q2M3G4 852 aaPredicted RBP14.82□□□□□ -0.04
CHD2-218ENST00000629346 NPLOC4Q8TAT6 608 aa14.82□□□□□ -0.04
CHD2-218ENST00000629346 PRDM12Q9H4Q4 367 aa14.82□□□□□ -0.04
CHD2-218ENST00000629346 RLFQ13129 1914 aa14.82□□□□□ -0.04
CHD2-218ENST00000629346 GPR75-ASB3A0A0A6YYF3 556 aa14.81□□□□□ -0.04
CHD2-218ENST00000629346 SLC15A5A6NIM6 579 aa14.81□□□□□ -0.04
CHD2-218ENST00000629346 USP17L10C9JJH3 530 aa14.81□□□□□ -0.04
CHD2-218ENST00000629346 ADORA1P30542 326 aa14.81□□□□□ -0.04
CHD2-218ENST00000629346 RFX5P48382 616 aaPredicted RBP14.81□□□□□ -0.04
CHD2-218ENST00000629346 CCNA1P78396 465 aa14.81□□□□□ -0.04
CHD2-218ENST00000629346 MECOMQ03112 1051 aa14.81□□□□□ -0.04
CHD2-218ENST00000629346 SNX17Q15036 470 aa14.81□□□□□ -0.04
CHD2-218ENST00000629346 SPTY2D1Q68D10 685 aaPredicted RBP14.81□□□□□ -0.04
CHD2-218ENST00000629346 C1QTNF1Q9BXJ1 281 aa14.81□□□□□ -0.04
CHD2-218ENST00000629346 CEP126Q9P2H0 1117 aa14.81□□□□□ -0.04
CHD2-218ENST00000629346 TACC3Q9Y6A5 838 aa14.81□□□□□ -0.04
CHD2-218ENST00000629346 IVNS1ABPQ9Y6Y0 642 aa14.81□□□□□ -0.04
CHD2-218ENST00000629346 ANP32CO43423 234 aa14.8□□□□□ -0.04
CHD2-218ENST00000629346 CNMDO75829 334 aa14.8□□□□□ -0.04
CHD2-218ENST00000629346 ASNSP08243 561 aa14.8□□□□□ -0.04
CHD2-218ENST00000629346 CYBAP13498 195 aa14.8□□□□□ -0.04
CHD2-218ENST00000629346 RAG1P15918 1043 aa14.8□□□□□ -0.04
CHD2-218ENST00000629346 IGFBP4P22692 258 aa14.8□□□□□ -0.04
CHD2-218ENST00000629346 RASGRF1Q13972 1273 aa14.8□□□□□ -0.04
CHD2-218ENST00000629346 CCDC184Q52MB2 194 aa14.8□□□□□ -0.04
CHD2-218ENST00000629346 CCDC102BQ68D86 513 aa14.8□□□□□ -0.04
CHD2-218ENST00000629346 GTF3C2Q8WUA4 911 aaPredicted RBP14.8□□□□□ -0.04
CHD2-218ENST00000629346 HERC5Q9UII4 1024 aaKnown RBP14.8□□□□□ -0.04
CHD2-218ENST00000629346 RABGAP1Q9Y3P9 1069 aa14.8□□□□□ -0.04
CHD2-218ENST00000629346 NPM3O75607 178 aaKnown RBP14.79□□□□□ -0.04
CHD2-218ENST00000629346 GDF11O95390 407 aa14.79□□□□□ -0.04
CHD2-218ENST00000629346 FPGSQ05932 587 aa14.79□□□□□ -0.04
CHD2-218ENST00000629346 ZYXQ15942 572 aaKnown RBP14.79□□□□□ -0.04
CHD2-218ENST00000629346 AKNAD1Q5T1N1 836 aa14.79□□□□□ -0.04
CHD2-218ENST00000629346 CCDC129Q6ZRS4 1044 aa14.79□□□□□ -0.04
CHD2-218ENST00000629346 ERICH6Q7L0X2 663 aa14.79□□□□□ -0.04
CHD2-218ENST00000629346 ZNF384Q8TF68 577 aa14.79□□□□□ -0.04
CHD2-218ENST00000629346 EMILIN3Q9NT22 766 aa14.79□□□□□ -0.04
CHD2-218ENST00000629346 HCN4Q9Y3Q4 1203 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms