RNA–Protein interactions for RNA: ENST00000628347.1

SOX2-OT-247, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 445 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-247ENST00000628347 AACSQ86V21 672 aa15.19■□□□□ 0.02
SOX2-OT-247ENST00000628347 RPAP2Q8IXW5 612 aaPredicted RBP15.19■□□□□ 0.02
SOX2-OT-247ENST00000628347 CRACR2BQ8N4Y2 399 aaPredicted RBP15.19■□□□□ 0.02
SOX2-OT-247ENST00000628347 RHPN1Q8TCX5 695 aa15.19■□□□□ 0.02
SOX2-OT-247ENST00000628347 COA7Q96BR5 231 aa15.19■□□□□ 0.02
SOX2-OT-247ENST00000628347 TRIM34Q9BYJ4 488 aa15.19■□□□□ 0.02
SOX2-OT-247ENST00000628347 ASCC2Q9H1I8 757 aaPredicted RBP15.19■□□□□ 0.02
SOX2-OT-247ENST00000628347 PCDH10Q9P2E7 1040 aa15.19■□□□□ 0.02
SOX2-OT-247ENST00000628347 UBE2Q1Q7Z7E8 422 aa15.18■□□□□ 0.02
SOX2-OT-247ENST00000628347 MAGEB6Q8N7X4 407 aa15.18■□□□□ 0.02
SOX2-OT-247ENST00000628347 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.18■□□□□ 0.02
SOX2-OT-247ENST00000628347 RNF208Q9H0X6 261 aa15.18■□□□□ 0.02
SOX2-OT-247ENST00000628347 EHD4Q9H223 541 aa15.18■□□□□ 0.02
SOX2-OT-247ENST00000628347 ANTXR1Q9H6X2 564 aa15.18■□□□□ 0.02
SOX2-OT-247ENST00000628347 MORF4L1Q9UBU8 362 aa15.18■□□□□ 0.02
SOX2-OT-247ENST00000628347 BIN2Q9UBW5 565 aaPredicted RBP15.18■□□□□ 0.02
SOX2-OT-247ENST00000628347 ZBTB21Q9ULJ3 1066 aa15.18■□□□□ 0.02
SOX2-OT-247ENST00000628347 DDX19BQ9UMR2 479 aa15.18■□□□□ 0.02
SOX2-OT-247ENST00000628347 CEP290O15078 2479 aa15.18■□□□□ 0.02
SOX2-OT-247ENST00000628347 USP17L10C9JJH3 530 aa15.17■□□□□ 0.02
SOX2-OT-247ENST00000628347 MTMR2Q13614 643 aa15.17■□□□□ 0.02
SOX2-OT-247ENST00000628347 TTF1Q15361 905 aaPredicted RBP15.17■□□□□ 0.02
SOX2-OT-247ENST00000628347 HABP4Q5JVS0 413 aaKnown RBP15.17■□□□□ 0.02
SOX2-OT-247ENST00000628347 TATDN1Q6P1N9 297 aa15.17■□□□□ 0.02
SOX2-OT-247ENST00000628347 MIGA1Q8NAN2 632 aa15.17■□□□□ 0.02
SOX2-OT-247ENST00000628347 KIF1BPQ96EK5 621 aa15.17■□□□□ 0.02
SOX2-OT-247ENST00000628347 ZBTB40Q9NUA8 1239 aa15.17■□□□□ 0.02
SOX2-OT-247ENST00000628347 TMOD4Q9NZQ9 345 aa15.17■□□□□ 0.02
SOX2-OT-247ENST00000628347 SAP30BPQ9UHR5 308 aaKnown RBP15.17■□□□□ 0.02
SOX2-OT-247ENST00000628347 NDUFB9Q9Y6M9 179 aa15.17■□□□□ 0.02
SOX2-OT-247ENST00000628347 DDX60LQ5H9U9 1706 aaKnown RBP15.17■□□□□ 0.02
SOX2-OT-247ENST00000628347 HMMRO75330 724 aa15.16■□□□□ 0.02
SOX2-OT-247ENST00000628347 GDF11O95390 407 aa15.16■□□□□ 0.02
SOX2-OT-247ENST00000628347 INHAP05111 366 aa15.16■□□□□ 0.02
SOX2-OT-247ENST00000628347 USP5P45974 858 aa15.16■□□□□ 0.02
SOX2-OT-247ENST00000628347 CLASRPQ8N2M8 674 aaKnown RBP15.16■□□□□ 0.02
SOX2-OT-247ENST00000628347 U2AF1L4Q8WU68 220 aaKnown RBP15.16■□□□□ 0.02
SOX2-OT-247ENST00000628347 RIOK1Q9BRS2 568 aaKnown RBP15.16■□□□□ 0.02
SOX2-OT-247ENST00000628347 UNC93B1Q9H1C4 597 aa15.16■□□□□ 0.02
SOX2-OT-247ENST00000628347 CHMP4BQ9H444 224 aaKnown RBP15.16■□□□□ 0.02
SOX2-OT-247ENST00000628347 IL1RAPL2Q9NP60 686 aa15.16■□□□□ 0.02
SOX2-OT-247ENST00000628347 RAB11FIP3O75154 756 aa15.15■□□□□ 0.02
SOX2-OT-247ENST00000628347 SGPL1O95470 568 aa15.15■□□□□ 0.02
SOX2-OT-247ENST00000628347 ELNP15502 786 aa15.15■□□□□ 0.02
SOX2-OT-247ENST00000628347 IRX3P78415 501 aaPredicted RBP15.15■□□□□ 0.02
SOX2-OT-247ENST00000628347 SHROOM1Q2M3G4 852 aaPredicted RBP15.15■□□□□ 0.02
SOX2-OT-247ENST00000628347 TTC6Q86TZ1 520 aa15.15■□□□□ 0.02
SOX2-OT-247ENST00000628347 SIRT2Q8IXJ6 389 aa15.15■□□□□ 0.02
SOX2-OT-247ENST00000628347 GTF3C2Q8WUA4 911 aaPredicted RBP15.15■□□□□ 0.02
SOX2-OT-247ENST00000628347 C12orf42Q96LP6 360 aa15.15■□□□□ 0.02
SOX2-OT-247ENST00000628347 PAK6Q9NQU5 681 aaPredicted RBP15.15■□□□□ 0.02
SOX2-OT-247ENST00000628347 SERPINB13Q9UIV8 391 aa15.15■□□□□ 0.02
SOX2-OT-247ENST00000628347 GJD2Q9UKL4 321 aa15.15■□□□□ 0.02
SOX2-OT-247ENST00000628347 HERVK_113P62684 666 aa15.14■□□□□ 0.01
SOX2-OT-247ENST00000628347 USP17L2Q6R6M4 530 aa15.14■□□□□ 0.01
SOX2-OT-247ENST00000628347 P2RX7Q99572 595 aaKnown RBP15.14■□□□□ 0.01
SOX2-OT-247ENST00000628347 COG6Q9Y2V7 657 aa15.14■□□□□ 0.01
SOX2-OT-247ENST00000628347 PLXNB2O15031 1838 aa15.14■□□□□ 0.01
SOX2-OT-247ENST00000628347 GH2P01242 217 aa15.13■□□□□ 0.01
SOX2-OT-247ENST00000628347 PDE6AP16499 860 aa15.13■□□□□ 0.01
SOX2-OT-247ENST00000628347 PPP4R3CPQ6ZMV5 832 aa15.13■□□□□ 0.01
SOX2-OT-247ENST00000628347 NAV1Q8NEY1 1877 aa15.13■□□□□ 0.01
SOX2-OT-247ENST00000628347 HTATIP2Q9BUP3 242 aa15.13■□□□□ 0.01
SOX2-OT-247ENST00000628347 EMILIN3Q9NT22 766 aa15.13■□□□□ 0.01
SOX2-OT-247ENST00000628347 MAGEB6P1A0A0J9YX57 407 aa15.12■□□□□ 0.01
SOX2-OT-247ENST00000628347 TCRBV5S4A2TA0A5A2 114 aa15.12■□□□□ 0.01
SOX2-OT-247ENST00000628347 FARP2O94887 1054 aaPredicted RBP15.12■□□□□ 0.01
SOX2-OT-247ENST00000628347 HMGCRP04035 888 aa15.12■□□□□ 0.01
SOX2-OT-247ENST00000628347 IFIT2P09913 472 aaKnown RBP15.12■□□□□ 0.01
SOX2-OT-247ENST00000628347 SLC9C2Q5TAH2 1124 aa15.12■□□□□ 0.01
SOX2-OT-247ENST00000628347 CRNKL1Q9BZJ0 848 aaKnown RBP15.12■□□□□ 0.01
SOX2-OT-247ENST00000628347 CRISPLD2Q9H0B8 497 aa15.12■□□□□ 0.01
SOX2-OT-247ENST00000628347 RCAN3Q9UKA8 241 aa15.12■□□□□ 0.01
SOX2-OT-247ENST00000628347 H0YGN5 161 aa15.11■□□□□ 0.01
SOX2-OT-247ENST00000628347 SHMT1P34896 483 aa15.11■□□□□ 0.01
SOX2-OT-247ENST00000628347 PLCD1P51178 756 aa15.11■□□□□ 0.01
SOX2-OT-247ENST00000628347 USP14P54578 494 aa15.11■□□□□ 0.01
SOX2-OT-247ENST00000628347 GABPAQ06546 454 aa15.11■□□□□ 0.01
SOX2-OT-247ENST00000628347 CERKLQ49MI3 558 aaPredicted RBP15.11■□□□□ 0.01
SOX2-OT-247ENST00000628347 GPRC5AQ8NFJ5 357 aa15.11■□□□□ 0.01
SOX2-OT-247ENST00000628347 KIAA1683Q9H0B3 1180 aa15.11■□□□□ 0.01
SOX2-OT-247ENST00000628347 TXNRD2Q9NNW7 524 aa15.11■□□□□ 0.01
SOX2-OT-247ENST00000628347 RBPJLQ9UBG7 517 aa15.11■□□□□ 0.01
SOX2-OT-247ENST00000628347 TAOK2Q9UL54 1235 aa15.11■□□□□ 0.01
SOX2-OT-247ENST00000628347 GOLIM4O00461 696 aa15.1■□□□□ 0.01
SOX2-OT-247ENST00000628347 XRCC5P13010 732 aaKnown RBP15.1■□□□□ 0.01
SOX2-OT-247ENST00000628347 MAPK4P31152 587 aa15.1■□□□□ 0.01
SOX2-OT-247ENST00000628347 ERVK-9P63128 1117 aa15.1■□□□□ 0.01
SOX2-OT-247ENST00000628347 ERVK-24P63145 666 aa15.1■□□□□ 0.01
SOX2-OT-247ENST00000628347 PDE3AQ14432 1141 aa15.1■□□□□ 0.01
SOX2-OT-247ENST00000628347 ABCB5Q2M3G0 1257 aa15.1■□□□□ 0.01
SOX2-OT-247ENST00000628347 SOCS4Q8WXH5 440 aa15.1■□□□□ 0.01
SOX2-OT-247ENST00000628347 DPF3Q92784 378 aa15.1■□□□□ 0.01
SOX2-OT-247ENST00000628347 DEFB118Q96PH6 123 aa15.1■□□□□ 0.01
SOX2-OT-247ENST00000628347 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.1■□□□□ 0.01
SOX2-OT-247ENST00000628347 CABP5Q9NP86 173 aa15.1■□□□□ 0.01
SOX2-OT-247ENST00000628347 COLQQ9Y215 455 aaPredicted RBP15.1■□□□□ 0.01
SOX2-OT-247ENST00000628347 ZNF532Q9HCE3 1301 aa15.1■□□□□ 0.01
SOX2-OT-247ENST00000628347 USP17L15C9J2P7 530 aa15.09■□□□□ 0.01
SOX2-OT-247ENST00000628347 USP17L13C9JLJ4 530 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms