RNA–Protein interactions for RNA: ENST00000627460.1

CHD2-211, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-211ENST00000627460 TCEANC2Q96MN5 208 aa10.1□□□□□ -0.79
CHD2-211ENST00000627460 ZDHHC15Q96MV8 337 aa10.1□□□□□ -0.79
CHD2-211ENST00000627460 GPR101Q96P66 508 aaPredicted RBP10.1□□□□□ -0.79
CHD2-211ENST00000627460 DHX36Q9H2U1 1008 aaKnown RBP10.1□□□□□ -0.79
CHD2-211ENST00000627460 ZSCAN16Q9H4T2 348 aaPredicted RBP10.1□□□□□ -0.79
CHD2-211ENST00000627460 ZSWIM5Q9P217 1185 aa10.1□□□□□ -0.79
CHD2-211ENST00000627460 NID2Q14112 1375 aa10.1□□□□□ -0.79
CHD2-211ENST00000627460 NEDD4P46934 1319 aa10.09□□□□□ -0.79
CHD2-211ENST00000627460 H3BQV1 296 aa10.09□□□□□ -0.79
CHD2-211ENST00000627460 ZBTB7AO95365 584 aa10.09□□□□□ -0.79
CHD2-211ENST00000627460 HLA-DOAP06340 250 aa10.09□□□□□ -0.79
CHD2-211ENST00000627460 SYT1P21579 422 aa10.09□□□□□ -0.79
CHD2-211ENST00000627460 CTDSPL2Q05D32 466 aa10.09□□□□□ -0.79
CHD2-211ENST00000627460 SCRN1Q12765 414 aa10.09□□□□□ -0.79
CHD2-211ENST00000627460 STK3Q13188 491 aa10.09□□□□□ -0.79
CHD2-211ENST00000627460 DOK7Q18PE1 504 aa10.09□□□□□ -0.79
CHD2-211ENST00000627460 RRP12Q5JTH9 1297 aaKnown RBP10.09□□□□□ -0.79
CHD2-211ENST00000627460 IFFO2Q5TF58 517 aa10.09□□□□□ -0.79
CHD2-211ENST00000627460 ATL3Q6DD88 541 aa10.09□□□□□ -0.79
CHD2-211ENST00000627460 APOA5Q6Q788 366 aa10.09□□□□□ -0.79
CHD2-211ENST00000627460 CATIPQ7Z7H3 387 aa10.09□□□□□ -0.79
CHD2-211ENST00000627460 TRIM22Q8IYM9 498 aa10.09□□□□□ -0.79
CHD2-211ENST00000627460 ZNF444Q8N0Y2 327 aaPredicted RBP10.09□□□□□ -0.79
CHD2-211ENST00000627460 LARGE2Q8N3Y3 721 aa10.09□□□□□ -0.79
CHD2-211ENST00000627460 OGFOD1Q8N543 542 aa10.09□□□□□ -0.79
CHD2-211ENST00000627460 SMARCC2Q8TAQ2 1214 aa10.09□□□□□ -0.79
CHD2-211ENST00000627460 IGDCC4Q8TDY8 1250 aa10.09□□□□□ -0.79
CHD2-211ENST00000627460 TGFBRAP1Q8WUH2 860 aa10.09□□□□□ -0.79
CHD2-211ENST00000627460 JDP2Q8WYK2 163 aa10.09□□□□□ -0.79
CHD2-211ENST00000627460 NBPF3Q9H094 633 aa10.09□□□□□ -0.79
CHD2-211ENST00000627460 MKNK2Q9HBH9 465 aa10.09□□□□□ -0.79
CHD2-211ENST00000627460 RBM28Q9NW13 759 aaKnown RBP10.09□□□□□ -0.79
CHD2-211ENST00000627460 TMOD2Q9NZR1 351 aa10.09□□□□□ -0.79
CHD2-211ENST00000627460 RBM27Q9P2N5 1060 aaKnown RBP10.09□□□□□ -0.79
CHD2-211ENST00000627460 SWAP70Q9UH65 585 aa10.09□□□□□ -0.79
CHD2-211ENST00000627460 MKRN1Q9UHC7 482 aaKnown RBP10.09□□□□□ -0.79
CHD2-211ENST00000627460 DAGLAQ9Y4D2 1042 aa10.09□□□□□ -0.79
CHD2-211ENST00000627460 LTBP3Q9NS15 1303 aa10.08□□□□□ -0.8
CHD2-211ENST00000627460 NAV1Q8NEY1 1877 aa10.08□□□□□ -0.8
CHD2-211ENST00000627460 A0A0G2JLW4 131 aa10.08□□□□□ -0.8
CHD2-211ENST00000627460 TSPY2A6NKD2 308 aa10.08□□□□□ -0.8
CHD2-211ENST00000627460 RANBP6O60518 1105 aaKnown RBP10.08□□□□□ -0.8
CHD2-211ENST00000627460 DDAH1O94760 285 aa10.08□□□□□ -0.8
CHD2-211ENST00000627460 BAG4O95429 457 aaKnown RBP10.08□□□□□ -0.8
CHD2-211ENST00000627460 LARGE1O95461 756 aa10.08□□□□□ -0.8
CHD2-211ENST00000627460 KIF5BP33176 963 aa10.08□□□□□ -0.8
CHD2-211ENST00000627460 PTGER2P43116 358 aa10.08□□□□□ -0.8
CHD2-211ENST00000627460 CRKP46108 304 aa10.08□□□□□ -0.8
CHD2-211ENST00000627460 ANTXR2P58335 489 aa10.08□□□□□ -0.8
CHD2-211ENST00000627460 R3HDM1Q15032 1099 aaKnown RBP10.08□□□□□ -0.8
CHD2-211ENST00000627460 DIXDC1Q155Q3 683 aa10.08□□□□□ -0.8
CHD2-211ENST00000627460 AOC3Q16853 763 aa10.08□□□□□ -0.8
CHD2-211ENST00000627460 DACT2Q5SW24 774 aa10.08□□□□□ -0.8
CHD2-211ENST00000627460 IFIT1BQ5T764 474 aaKnown RBP10.08□□□□□ -0.8
CHD2-211ENST00000627460 DGKHQ86XP1 1220 aa10.08□□□□□ -0.8
CHD2-211ENST00000627460 NECAB1Q8N987 351 aa10.08□□□□□ -0.8
CHD2-211ENST00000627460 AGBL3Q8NEM8 1001 aa10.08□□□□□ -0.8
CHD2-211ENST00000627460 SH3RF3Q8TEJ3 882 aaPredicted RBP10.08□□□□□ -0.8
CHD2-211ENST00000627460 ZSCAN10Q96SZ4 725 aaPredicted RBP10.08□□□□□ -0.8
CHD2-211ENST00000627460 MAP3K14Q99558 947 aa10.08□□□□□ -0.8
CHD2-211ENST00000627460 LRRC2Q9BYS8 371 aa10.08□□□□□ -0.8
CHD2-211ENST00000627460 TAOK3Q9H2K8 898 aa10.08□□□□□ -0.8
CHD2-211ENST00000627460 DBNDD1Q9H9R9 158 aa10.08□□□□□ -0.8
CHD2-211ENST00000627460 LY9Q9HBG7 655 aa10.08□□□□□ -0.8
CHD2-211ENST00000627460 TCP11L1Q9NUJ3 509 aa10.08□□□□□ -0.8
CHD2-211ENST00000627460 JAG2Q9Y219 1238 aa10.08□□□□□ -0.8
CHD2-211ENST00000627460 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.08□□□□□ -0.8
CHD2-211ENST00000627460 FLT1P17948 1338 aa10.07□□□□□ -0.8
CHD2-211ENST00000627460 STK36Q9NRP7 1315 aa10.07□□□□□ -0.8
CHD2-211ENST00000627460 PTPDC1A2A3K4 754 aa10.07□□□□□ -0.8
CHD2-211ENST00000627460 VPS37CA5D8V6 355 aaPredicted RBP10.07□□□□□ -0.8
CHD2-211ENST00000627460 GOLGA8AA7E2F4 631 aa10.07□□□□□ -0.8
CHD2-211ENST00000627460 GPR37O15354 613 aa10.07□□□□□ -0.8
CHD2-211ENST00000627460 MBD3O95983 291 aa10.07□□□□□ -0.8
CHD2-211ENST00000627460 F13A1P00488 732 aa10.07□□□□□ -0.8
CHD2-211ENST00000627460 XBP1P17861 261 aa10.07□□□□□ -0.8
CHD2-211ENST00000627460 KCNA3P22001 575 aa10.07□□□□□ -0.8
CHD2-211ENST00000627460 GNAQP50148 359 aa10.07□□□□□ -0.8
CHD2-211ENST00000627460 RHBDL3P58872 404 aa10.07□□□□□ -0.8
CHD2-211ENST00000627460 TRIM29Q14134 588 aa10.07□□□□□ -0.8
CHD2-211ENST00000627460 TNIP1Q15025 636 aa10.07□□□□□ -0.8
CHD2-211ENST00000627460 CYB5R4Q7L1T6 521 aa10.07□□□□□ -0.8
CHD2-211ENST00000627460 CHST3Q7LGC8 479 aa10.07□□□□□ -0.8
CHD2-211ENST00000627460 NSUN7Q8NE18 718 aaKnown RBP10.07□□□□□ -0.8
CHD2-211ENST00000627460 SPON1Q9HCB6 807 aa10.07□□□□□ -0.8
CHD2-211ENST00000627460 ZNRF3Q9ULT6 936 aa10.07□□□□□ -0.8
CHD2-211ENST00000627460 TNKSO95271 1327 aa10.07□□□□□ -0.8
CHD2-211ENST00000627460 COL2A1P02458 1487 aaPredicted RBP10.06□□□□□ -0.8
CHD2-211ENST00000627460 PSME4Q14997 1843 aa10.06□□□□□ -0.8
CHD2-211ENST00000627460 TSPY3P0CV98 308 aa10.06□□□□□ -0.8
CHD2-211ENST00000627460 TSPY8P0CW00 308 aa10.06□□□□□ -0.8
CHD2-211ENST00000627460 RPS12P25398 132 aaKnown RBP10.06□□□□□ -0.8
CHD2-211ENST00000627460 IARSP41252 1262 aaKnown RBP10.06□□□□□ -0.8
CHD2-211ENST00000627460 AKAP17AQ02040 695 aaKnown RBP10.06□□□□□ -0.8
CHD2-211ENST00000627460 RTN1Q16799 776 aa10.06□□□□□ -0.8
CHD2-211ENST00000627460 RSBN1LQ6PCB5 846 aaPredicted RBP10.06□□□□□ -0.8
CHD2-211ENST00000627460 C16orf86Q6ZW13 317 aa10.06□□□□□ -0.8
CHD2-211ENST00000627460 FAM177A1Q8N128 213 aaPredicted RBP10.06□□□□□ -0.8
CHD2-211ENST00000627460 CERS5Q8N5B7 392 aa10.06□□□□□ -0.8
CHD2-211ENST00000627460 CTCFLQ8NI51 663 aaPredicted RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms