RNA–Protein interactions for RNA: ENST00000626716.1

R3HDM4-208, Transcript of R3H domain containing 4, humanhuman

TSL 5 BASIC

Gene R3HDM4, Length 138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-208ENST00000626716 TMOD4Q9NZQ9 345 aa30.85■■■□□ 2.53
R3HDM4-208ENST00000626716 C19orf81C9J6K1 198 aa30.84■■■□□ 2.53
R3HDM4-208ENST00000626716 DYNLL1P63167 89 aaKnown RBP30.84■■■□□ 2.53
R3HDM4-208ENST00000626716 DEFB118Q96PH6 123 aa30.84■■■□□ 2.53
R3HDM4-208ENST00000626716 SAP30BPQ9UHR5 308 aaKnown RBP30.84■■■□□ 2.53
R3HDM4-208ENST00000626716 HLA-DOAP06340 250 aa30.83■■■□□ 2.53
R3HDM4-208ENST00000626716 HOXA7P31268 230 aaPredicted RBP30.83■■■□□ 2.53
R3HDM4-208ENST00000626716 IRX3P78415 501 aaPredicted RBP30.83■■■□□ 2.53
R3HDM4-208ENST00000626716 PAK6Q9NQU5 681 aaPredicted RBP30.83■■■□□ 2.53
R3HDM4-208ENST00000626716 GJD2Q9UKL4 321 aa30.83■■■□□ 2.53
R3HDM4-208ENST00000626716 IDH1O75874 414 aaKnown RBP30.82■■■□□ 2.52
R3HDM4-208ENST00000626716 MORF4L1Q9UBU8 362 aa30.82■■■□□ 2.52
R3HDM4-208ENST00000626716 NR2E3Q9Y5X4 410 aa30.82■■■□□ 2.52
R3HDM4-208ENST00000626716 USP17L10C9JJH3 530 aa30.81■■■□□ 2.52
R3HDM4-208ENST00000626716 GDF11O95390 407 aa30.81■■■□□ 2.52
R3HDM4-208ENST00000626716 CEP85Q6P2H3 762 aa30.81■■■□□ 2.52
R3HDM4-208ENST00000626716 CHRDL2Q6WN34 429 aa30.81■■■□□ 2.52
R3HDM4-208ENST00000626716 CERS3Q8IU89 383 aa30.81■■■□□ 2.52
R3HDM4-208ENST00000626716 MIER1Q8N108 512 aa30.81■■■□□ 2.52
R3HDM4-208ENST00000626716 P2RX7Q99572 595 aaKnown RBP30.81■■■□□ 2.52
R3HDM4-208ENST00000626716 SHROOM1Q2M3G4 852 aaPredicted RBP30.8■■■□□ 2.52
R3HDM4-208ENST00000626716 ZBTB21Q9ULJ3 1066 aa30.8■■■□□ 2.52
R3HDM4-208ENST00000626716 ERC1Q8IUD2 1116 aa30.79■■■□□ 2.52
R3HDM4-208ENST00000626716 MAGEB6Q8N7X4 407 aa30.79■■■□□ 2.52
R3HDM4-208ENST00000626716 CRISPLD2Q9H0B8 497 aa30.79■■■□□ 2.52
R3HDM4-208ENST00000626716 MYH1P12882 1939 aa30.79■■■□□ 2.52
R3HDM4-208ENST00000626716 RANBP2P49792 3224 aaKnown RBP30.78■■■□□ 2.52
R3HDM4-208ENST00000626716 HMGCRP04035 888 aa30.78■■■□□ 2.52
R3HDM4-208ENST00000626716 MIGA1Q8NAN2 632 aa30.78■■■□□ 2.52
R3HDM4-208ENST00000626716 USP5P45974 858 aa30.77■■■□□ 2.52
R3HDM4-208ENST00000626716 HERVK_113P62684 666 aa30.77■■■□□ 2.52
R3HDM4-208ENST00000626716 MAP3K12Q12852 859 aa30.77■■■□□ 2.52
R3HDM4-208ENST00000626716 GPRC5AQ8NFJ5 357 aa30.77■■■□□ 2.52
R3HDM4-208ENST00000626716 XRN2Q9H0D6 950 aaKnown RBP eCLIP30.77■■■□□ 2.525e-7■■■■■ 47.8
R3HDM4-208ENST00000626716 EXOC6BQ9Y2D4 811 aa30.77■■■□□ 2.52
R3HDM4-208ENST00000626716 NDUFB9Q9Y6M9 179 aa30.77■■■□□ 2.52
R3HDM4-208ENST00000626716 TMED8Q6PL24 325 aaPredicted RBP30.76■■■□□ 2.51
R3HDM4-208ENST00000626716 AACSQ86V21 672 aa30.76■■■□□ 2.51
R3HDM4-208ENST00000626716 ANTXR1Q9H6X2 564 aa30.76■■■□□ 2.51
R3HDM4-208ENST00000626716 RBM27Q9P2N5 1060 aaKnown RBP30.76■■■□□ 2.51
R3HDM4-208ENST00000626716 EMILIN3Q9NT22 766 aa30.75■■■□□ 2.51
R3HDM4-208ENST00000626716 RPTORQ8N122 1335 aa30.74■■■□□ 2.51
R3HDM4-208ENST00000626716 GH2P01242 217 aa30.74■■■□□ 2.51
R3HDM4-208ENST00000626716 TATDN1Q6P1N9 297 aa30.74■■■□□ 2.51
R3HDM4-208ENST00000626716 USP17L2Q6R6M4 530 aa30.74■■■□□ 2.51
R3HDM4-208ENST00000626716 PANK1Q8TE04 598 aa30.74■■■□□ 2.51
R3HDM4-208ENST00000626716 TXNRD2Q9NNW7 524 aa30.74■■■□□ 2.51
R3HDM4-208ENST00000626716 HMX1Q9NP08 348 aaPredicted RBP30.74■■■□□ 2.51
R3HDM4-208ENST00000626716 RBPJLQ9UBG7 517 aa30.74■■■□□ 2.51
R3HDM4-208ENST00000626716 EVI5O60447 810 aa30.73■■■□□ 2.51
R3HDM4-208ENST00000626716 PEX10O60683 326 aa30.73■■■□□ 2.51
R3HDM4-208ENST00000626716 HSP90AB4PQ58FF6 505 aa30.73■■■□□ 2.51
R3HDM4-208ENST00000626716 PAWRQ96IZ0 340 aaKnown RBP30.73■■■□□ 2.51
R3HDM4-208ENST00000626716 SERPINB13Q9UIV8 391 aa30.73■■■□□ 2.51
R3HDM4-208ENST00000626716 PLXNB2O15031 1838 aa30.73■■■□□ 2.51
R3HDM4-208ENST00000626716 TTC6Q86TZ1 520 aa30.72■■■□□ 2.51
R3HDM4-208ENST00000626716 GTF3C2Q8WUA4 911 aaPredicted RBP30.72■■■□□ 2.51
R3HDM4-208ENST00000626716 NUDT12Q9BQG2 462 aa30.72■■■□□ 2.51
R3HDM4-208ENST00000626716 EHD4Q9H223 541 aa30.72■■■□□ 2.51
R3HDM4-208ENST00000626716 CYP2B6P20813 491 aa30.71■■■□□ 2.51
R3HDM4-208ENST00000626716 TRIM32Q13049 653 aa30.71■■■□□ 2.51
R3HDM4-208ENST00000626716 Q3C1V9 767 aa30.71■■■□□ 2.51
R3HDM4-208ENST00000626716 NECAB2Q7Z6G3 386 aa30.71■■■□□ 2.51
R3HDM4-208ENST00000626716 SZT2Q5T011 3432 aa30.7■■■□□ 2.51
R3HDM4-208ENST00000626716 XRCC5P13010 732 aaKnown RBP30.7■■■□□ 2.51
R3HDM4-208ENST00000626716 MAPK4P31152 587 aa30.7■■■□□ 2.51
R3HDM4-208ENST00000626716 ANKLE1Q8NAG6 615 aa30.7■■■□□ 2.51
R3HDM4-208ENST00000626716 PRO3102Q9H379 93 aa30.7■■■□□ 2.51
R3HDM4-208ENST00000626716 IL1RAPL2Q9NP60 686 aa30.7■■■□□ 2.51
R3HDM4-208ENST00000626716 ERVK-9P63128 1117 aa30.69■■■□□ 2.5
R3HDM4-208ENST00000626716 ERVK-24P63145 666 aa30.69■■■□□ 2.5
R3HDM4-208ENST00000626716 CERKLQ49MI3 558 aaPredicted RBP30.69■■■□□ 2.5
R3HDM4-208ENST00000626716 CCAR1Q8IX12 1150 aaKnown RBP30.69■■■□□ 2.5
R3HDM4-208ENST00000626716 RHPN1Q8TCX5 695 aa30.69■■■□□ 2.5
R3HDM4-208ENST00000626716 SOCS4Q8WXH5 440 aa30.69■■■□□ 2.5
R3HDM4-208ENST00000626716 TRIB2Q92519 343 aa30.69■■■□□ 2.5
R3HDM4-208ENST00000626716 ZBED9Q6R2W3 1325 aa30.69■■■□□ 2.5
R3HDM4-208ENST00000626716 MS4A1P11836 297 aa30.68■■■□□ 2.5
R3HDM4-208ENST00000626716 TTF1Q15361 905 aaPredicted RBP30.68■■■□□ 2.5
R3HDM4-208ENST00000626716 DIEXFQ68CQ4 756 aaKnown RBP30.68■■■□□ 2.5
R3HDM4-208ENST00000626716 C12orf42Q96LP6 360 aa30.68■■■□□ 2.5
R3HDM4-208ENST00000626716 PDE3AQ14432 1141 aa30.67■■■□□ 2.5
R3HDM4-208ENST00000626716 RAB3GAP1Q15042 981 aa30.67■■■□□ 2.5
R3HDM4-208ENST00000626716 ABCB5Q2M3G0 1257 aa30.67■■■□□ 2.5
R3HDM4-208ENST00000626716 POTEEQ6S8J3 1075 aa30.67■■■□□ 2.5
R3HDM4-208ENST00000626716 DIS3LQ8TF46 1054 aaKnown RBP30.67■■■□□ 2.5
R3HDM4-208ENST00000626716 FEZ1Q99689 392 aa30.67■■■□□ 2.5
R3HDM4-208ENST00000626716 RIOK1Q9BRS2 568 aaKnown RBP30.67■■■□□ 2.5
R3HDM4-208ENST00000626716 PAGR1Q9BTK6 254 aa30.67■■■□□ 2.5
R3HDM4-208ENST00000626716 MAGEB6P1A0A0J9YX57 407 aa30.66■■■□□ 2.5
R3HDM4-208ENST00000626716 USP17L15C9J2P7 530 aa30.66■■■□□ 2.5
R3HDM4-208ENST00000626716 USP17L13C9JLJ4 530 aa30.66■■■□□ 2.5
R3HDM4-208ENST00000626716 USP17L11C9JVI0 530 aa30.66■■■□□ 2.5
R3HDM4-208ENST00000626716 USP17L18D6R9N7 530 aa30.66■■■□□ 2.5
R3HDM4-208ENST00000626716 USP17L22D6RA61 530 aa30.66■■■□□ 2.5
R3HDM4-208ENST00000626716 USP17L17D6RBQ6 530 aa30.66■■■□□ 2.5
R3HDM4-208ENST00000626716 USP17L19D6RCP7 530 aa30.66■■■□□ 2.5
R3HDM4-208ENST00000626716 USP17L20D6RJB6 530 aa30.66■■■□□ 2.5
R3HDM4-208ENST00000626716 USP17L24Q0WX57 530 aa30.66■■■□□ 2.5
R3HDM4-208ENST00000626716 ZYXQ15942 572 aaKnown RBP30.66■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms