RNA–Protein interactions for RNA: ENST00000626274.2

PNKP-219, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 752 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-219ENST00000626274 C12orf60Q5U649 245 aa23.97■■□□□ 1.43
PNKP-219ENST00000626274 CCDC84Q86UT8 332 aaPredicted RBP23.97■■□□□ 1.43
PNKP-219ENST00000626274 ARPP21Q9UBL0 812 aaPredicted RBP23.97■■□□□ 1.43
PNKP-219ENST00000626274 PATL2C9JE40 543 aaKnown RBP23.96■■□□□ 1.43
PNKP-219ENST00000626274 SHMT1P34896 483 aa23.96■■□□□ 1.43
PNKP-219ENST00000626274 JAG1P78504 1218 aa23.96■■□□□ 1.43
PNKP-219ENST00000626274 CERKLQ49MI3 558 aaPredicted RBP23.96■■□□□ 1.43
PNKP-219ENST00000626274 COL13A1Q5TAT6 717 aaPredicted RBP23.96■■□□□ 1.43
PNKP-219ENST00000626274 CTR9Q6PD62 1173 aa23.96■■□□□ 1.43
PNKP-219ENST00000626274 CENPQQ7L2Z9 268 aaPredicted RBP23.96■■□□□ 1.43
PNKP-219ENST00000626274 FAM43AQ8N2R8 423 aa23.96■■□□□ 1.43
PNKP-219ENST00000626274 AS3MTQ9HBK9 375 aa23.96■■□□□ 1.43
PNKP-219ENST00000626274 ZCCHC17Q9NP64 241 aaKnown RBP23.96■■□□□ 1.43
PNKP-219ENST00000626274 HELLSQ9NRZ9 838 aa23.96■■□□□ 1.43
PNKP-219ENST00000626274 SWAP70Q9UH65 585 aa23.96■■□□□ 1.43
PNKP-219ENST00000626274 ZBTB21Q9ULJ3 1066 aa23.96■■□□□ 1.43
PNKP-219ENST00000626274 CYP2D7A0A087X1C5 515 aa23.95■■□□□ 1.42
PNKP-219ENST00000626274 TRIM75PA6NK02 468 aa23.95■■□□□ 1.42
PNKP-219ENST00000626274 BTBD19C9JJ37 291 aa23.95■■□□□ 1.42
PNKP-219ENST00000626274 APPP05067 770 aa23.95■■□□□ 1.42
PNKP-219ENST00000626274 SBK1Q52WX2 424 aa23.95■■□□□ 1.42
PNKP-219ENST00000626274 ZNF280CQ8ND82 737 aa23.95■■□□□ 1.42
PNKP-219ENST00000626274 A0A0G2JLL6 359 aaPredicted RBP23.94■■□□□ 1.42
PNKP-219ENST00000626274 SPP2Q13103 211 aa23.94■■□□□ 1.42
PNKP-219ENST00000626274 NOM1Q5C9Z4 860 aaKnown RBP23.94■■□□□ 1.42
PNKP-219ENST00000626274 FASTKD5Q7L8L6 764 aaKnown RBP23.94■■□□□ 1.42
PNKP-219ENST00000626274 PRRT2Q7Z6L0 340 aaPredicted RBP23.94■■□□□ 1.42
PNKP-219ENST00000626274 NACAP1Q9BZK3 213 aa23.94■■□□□ 1.42
PNKP-219ENST00000626274 EPB41L4AQ9HCS5 686 aaPredicted RBP23.94■■□□□ 1.42
PNKP-219ENST00000626274 GH2P01242 217 aa23.93■■□□□ 1.42
PNKP-219ENST00000626274 SDSP20132 328 aa23.93■■□□□ 1.42
PNKP-219ENST00000626274 TDO2P48775 406 aa23.93■■□□□ 1.42
PNKP-219ENST00000626274 CRHR2Q13324 411 aa23.93■■□□□ 1.42
PNKP-219ENST00000626274 MOGSQ13724 837 aa23.93■■□□□ 1.42
PNKP-219ENST00000626274 TAF1CQ15572 869 aaPredicted RBP23.93■■□□□ 1.42
PNKP-219ENST00000626274 ABCB5Q2M3G0 1257 aa23.93■■□□□ 1.42
PNKP-219ENST00000626274 SHROOM1Q2M3G4 852 aaPredicted RBP23.93■■□□□ 1.42
PNKP-219ENST00000626274 TTC22Q5TAA0 569 aa23.93■■□□□ 1.42
PNKP-219ENST00000626274 CCDC129Q6ZRS4 1044 aa23.93■■□□□ 1.42
PNKP-219ENST00000626274 ANKRD23Q86SG2 305 aa23.93■■□□□ 1.42
PNKP-219ENST00000626274 IFNL3Q8IZI9 196 aa23.93■■□□□ 1.42
PNKP-219ENST00000626274 SLC44A5Q8NCS7 719 aa23.93■■□□□ 1.42
PNKP-219ENST00000626274 DYNLL2Q96FJ2 89 aa23.93■■□□□ 1.42
PNKP-219ENST00000626274 FAM227BQ96M60 508 aa23.93■■□□□ 1.42
PNKP-219ENST00000626274 WDR18Q9BV38 432 aa23.93■■□□□ 1.42
PNKP-219ENST00000626274 R3HDMLQ9H3Y0 253 aa23.93■■□□□ 1.42
PNKP-219ENST00000626274 CABP5Q9NP86 173 aa23.93■■□□□ 1.42
PNKP-219ENST00000626274 GPR25O00155 361 aa23.92■■□□□ 1.42
PNKP-219ENST00000626274 NMIQ13287 307 aaPredicted RBP23.92■■□□□ 1.42
PNKP-219ENST00000626274 MCMDC2Q4G0Z9 681 aa23.92■■□□□ 1.42
PNKP-219ENST00000626274 ZFYVE28Q9HCC9 887 aa23.92■■□□□ 1.42
PNKP-219ENST00000626274 A0A0D9SFI3 127 aa23.91■■□□□ 1.42
PNKP-219ENST00000626274 SMIM22K7EJ46 135 aa23.91■■□□□ 1.42
PNKP-219ENST00000626274 HIP1O00291 1037 aa23.91■■□□□ 1.42
PNKP-219ENST00000626274 GADL1Q6ZQY3 521 aa23.91■■□□□ 1.42
PNKP-219ENST00000626274 C16orf86Q6ZW13 317 aa23.91■■□□□ 1.42
PNKP-219ENST00000626274 CCDC136Q96JN2 1154 aa23.91■■□□□ 1.42
PNKP-219ENST00000626274 MINDY4BA8MYZ0 360 aa23.9■■□□□ 1.42
PNKP-219ENST00000626274 PDHXO00330 501 aa23.9■■□□□ 1.42
PNKP-219ENST00000626274 CDK8P49336 464 aa23.9■■□□□ 1.42
PNKP-219ENST00000626274 GPAT2Q6NUI2 795 aa23.9■■□□□ 1.42
PNKP-219ENST00000626274 ZNF296Q8WUU4 475 aaPredicted RBP23.9■■□□□ 1.42
PNKP-219ENST00000626274 NAPBQ9H115 298 aa23.9■■□□□ 1.42
PNKP-219ENST00000626274 DIAPH3Q9NSV4 1193 aa23.9■■□□□ 1.42
PNKP-219ENST00000626274 LOC285556D6RIA3 1793 aa23.89■■□□□ 1.42
PNKP-219ENST00000626274 GSPT1P15170 499 aaKnown RBP23.89■■□□□ 1.41
PNKP-219ENST00000626274 CCDC17Q96LX7 622 aa23.89■■□□□ 1.41
PNKP-219ENST00000626274 C19orf81C9J6K1 198 aa23.88■■□□□ 1.41
PNKP-219ENST00000626274 MPHOSPH10O00566 681 aaKnown RBP23.88■■□□□ 1.41
PNKP-219ENST00000626274 FKTNO75072 461 aa23.88■■□□□ 1.41
PNKP-219ENST00000626274 BACE1P56817 501 aa23.88■■□□□ 1.41
PNKP-219ENST00000626274 RAB3GAP1Q15042 981 aa23.88■■□□□ 1.41
PNKP-219ENST00000626274 SH3D19Q5HYK7 790 aa23.88■■□□□ 1.41
PNKP-219ENST00000626274 PROCA1Q8NCQ7 364 aaPredicted RBP23.88■■□□□ 1.41
PNKP-219ENST00000626274 ROBO3Q96MS0 1386 aa23.88■■□□□ 1.41
PNKP-219ENST00000626274 USP17L10C9JJH3 530 aa23.87■■□□□ 1.41
PNKP-219ENST00000626274 HMGCS2P54868 508 aa23.87■■□□□ 1.41
PNKP-219ENST00000626274 MFAP1P55081 439 aaKnown RBP23.87■■□□□ 1.41
PNKP-219ENST00000626274 MTMR2Q13614 643 aa23.87■■□□□ 1.41
PNKP-219ENST00000626274 TMEM179Q6ZVK1 233 aa23.87■■□□□ 1.41
PNKP-219ENST00000626274 AGTPBP1Q9UPW5 1226 aa23.87■■□□□ 1.41
PNKP-219ENST00000626274 SLC45A1Q9Y2W3 748 aa23.87■■□□□ 1.41
PNKP-219ENST00000626274 CCDC171Q6TFL3 1326 aa23.86■■□□□ 1.41
PNKP-219ENST00000626274 FOXP2O15409 715 aa23.86■■□□□ 1.41
PNKP-219ENST00000626274 TLR2O60603 784 aa23.86■■□□□ 1.41
PNKP-219ENST00000626274 GUCY1A2P33402 732 aa23.86■■□□□ 1.41
PNKP-219ENST00000626274 SEPT2Q15019 361 aa23.86■■□□□ 1.41
PNKP-219ENST00000626274 VPS53Q5VIR6 699 aa23.86■■□□□ 1.41
PNKP-219ENST00000626274 CWC27Q6UX04 472 aaKnown RBP23.86■■□□□ 1.41
PNKP-219ENST00000626274 TMOD4Q9NZQ9 345 aa23.86■■□□□ 1.41
PNKP-219ENST00000626274 AKR1B1P15121 316 aa23.85■■□□□ 1.41
PNKP-219ENST00000626274 ALX1Q15699 326 aa23.85■■□□□ 1.41
PNKP-219ENST00000626274 ZNF589Q86UQ0 364 aaPredicted RBP23.85■■□□□ 1.41
PNKP-219ENST00000626274 TNS4Q8IZW8 715 aa23.85■■□□□ 1.41
PNKP-219ENST00000626274 STK11IPQ8N1F8 1099 aa23.85■■□□□ 1.41
PNKP-219ENST00000626274 PARK7Q99497 189 aaKnown RBP23.85■■□□□ 1.41
PNKP-219ENST00000626274 SLC3A2P08195 630 aaKnown RBP23.84■■□□□ 1.41
PNKP-219ENST00000626274 FEZ1Q99689 392 aa23.84■■□□□ 1.41
PNKP-219ENST00000626274 MKNK2Q9HBH9 465 aa23.84■■□□□ 1.41
PNKP-219ENST00000626274 ZNF287Q9HBT7 754 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms