RNA–Protein interactions for RNA: ENST00000626021.2

PTP4A1-205, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 2,203 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-205ENST00000626021 SYTL4Q96C24 671 aaPredicted RBP4.77□□□□□ -1.65
PTP4A1-205ENST00000626021 CEP89Q96ST8 783 aa4.77□□□□□ -1.65
PTP4A1-205ENST00000626021 SLC4A5Q9BY07 1137 aa4.77□□□□□ -1.65
PTP4A1-205ENST00000626021 FTOQ9C0B1 505 aaKnown RBP eCLIP4.77□□□□□ -1.65
PTP4A1-205ENST00000626021 PRDM11Q9NQV5 511 aa4.77□□□□□ -1.65
PTP4A1-205ENST00000626021 CLIC4Q9Y696 253 aa4.77□□□□□ -1.65
PTP4A1-205ENST00000626021 WDR19Q8NEZ3 1342 aa4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 A0A087WWV3 80 aa4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 PPFIA4O75335 1185 aa4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 PFKFB1P16118 471 aa4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 FECHP22830 423 aa4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 SYKP43405 635 aa4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 CHMP4BP1P59074 171 aa4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 SF3B2Q13435 895 aaKnown RBP4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 GNL2Q13823 731 aaKnown RBP4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 TEX2Q8IWB9 1127 aa4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 EFCAB13Q8IY85 973 aa4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 JMYQ8N9B5 988 aa4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 TRIML1Q8N9V2 468 aa4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 KBTBD3Q8NAB2 608 aa4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 CTCFLQ8NI51 663 aaPredicted RBP4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 PANX2Q96RD6 677 aa4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 WDR24Q96S15 920 aa4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 NCAPGQ9BPX3 1015 aa4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 BICC1Q9H694 974 aaKnown RBP4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 ANKZF1Q9H8Y5 726 aa4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 GPR108Q9NPR9 543 aa4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 EIF4ENIF1Q9NRA8 985 aaKnown RBP4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 MYO1AQ9UBC5 1043 aa4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 DACH1Q9UI36 760 aa4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 JRKLQ9Y4A0 524 aa4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 MAST2Q6P0Q8 1798 aa4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 SLIT2O94813 1529 aa4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 EIF3CLB5ME19 914 aaKnown RBP4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 E7EWF7 191 aa4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 SNRPA1P09661 255 aaKnown RBP4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 CCDC175P0C221 793 aa4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 CSB-PGBD3P0DP91 1061 aa4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 ATP1A3P13637 1013 aa4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 IL2RBP14784 551 aa4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 ZNF18P17022 549 aa4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 ATP2B1P20020 1258 aa4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 MCM3P25205 808 aa4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 RFX5P48382 616 aaPredicted RBP4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 AARSP49588 968 aaKnown RBP eCLIP4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 PIP4K2BP78356 416 aa4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 NR1I3Q14994 352 aa4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 WHAMMP3Q1A5X7 153 aa4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 TNNI3KQ59H18 835 aa4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 ZMYM1Q5SVZ6 1142 aa4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 NT5DC1Q5TFE4 455 aa4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 SPECC1LQ69YQ0 1117 aa4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 WDR93Q6P2C0 686 aa4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 LRRC31Q6UY01 552 aa4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 PLPP6Q8IY26 295 aa4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 CCDC12Q8WUD4 166 aaPredicted RBP4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 DHX58Q96C10 678 aa4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 CCDC51Q96ER9 411 aa4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 CCDC34Q96HJ3 373 aa4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 ZNF496Q96IT1 587 aaPredicted RBP4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 C8orf76Q96K31 380 aa4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 FMNL2Q96PY5 1086 aa4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 MYCBPQ99417 103 aaPredicted RBP4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 EIF3CQ99613 913 aaKnown RBP4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 EPC1Q9H2F5 836 aa4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 PDE11AQ9HCR9 933 aa4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 TLR7Q9NYK1 1049 aaKnown RBP4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 VPS18Q9P253 973 aa4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 HOOK1Q9UJC3 728 aaKnown RBP4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 FPGT-TNNI3KV9GXZ4 949 aa4.76□□□□□ -1.65
PTP4A1-205ENST00000626021 BCL9O00512 1426 aa4.75□□□□□ -1.65
PTP4A1-205ENST00000626021 PRAMEF22A3QJZ6 481 aa4.75□□□□□ -1.65
PTP4A1-205ENST00000626021 GOLGA8CPA6NN73 597 aa4.75□□□□□ -1.65
PTP4A1-205ENST00000626021 WIPF1O43516 503 aa4.75□□□□□ -1.65
PTP4A1-205ENST00000626021 SARSP49591 514 aaKnown RBP4.75□□□□□ -1.65
PTP4A1-205ENST00000626021 EIF5P55010 431 aaKnown RBP4.75□□□□□ -1.65
PTP4A1-205ENST00000626021 GSCP56915 257 aaPredicted RBP4.75□□□□□ -1.65
PTP4A1-205ENST00000626021 CCT2P78371 535 aaKnown RBP4.75□□□□□ -1.65
PTP4A1-205ENST00000626021 KIF23Q02241 960 aaPredicted RBP4.75□□□□□ -1.65
PTP4A1-205ENST00000626021 RABL6Q3YEC7 729 aaPredicted RBP4.75□□□□□ -1.65
PTP4A1-205ENST00000626021 RESP18Q5W5W9 173 aa4.75□□□□□ -1.65
PTP4A1-205ENST00000626021 CCDC102BQ68D86 513 aa4.75□□□□□ -1.65
PTP4A1-205ENST00000626021 RASGRP2Q7LDG7 609 aa4.75□□□□□ -1.65
PTP4A1-205ENST00000626021 PACS2Q86VP3 889 aa4.75□□□□□ -1.65
PTP4A1-205ENST00000626021 MLKLQ8NB16 471 aa4.75□□□□□ -1.65
PTP4A1-205ENST00000626021 ZCRB1Q8TBF4 217 aaKnown RBP4.75□□□□□ -1.65
PTP4A1-205ENST00000626021 METTL22Q9BUU2 404 aaPredicted RBP4.75□□□□□ -1.65
PTP4A1-205ENST00000626021 DEF6Q9H4E7 631 aa4.75□□□□□ -1.65
PTP4A1-205ENST00000626021 ABCB6Q9NP58 842 aa4.75□□□□□ -1.65
PTP4A1-205ENST00000626021 INTS13Q9NVM9 706 aa4.75□□□□□ -1.65
PTP4A1-205ENST00000626021 DBNLQ9UJU6 430 aaKnown RBP4.75□□□□□ -1.65
PTP4A1-205ENST00000626021 TTF2Q9UNY4 1162 aaKnown RBP4.75□□□□□ -1.65
PTP4A1-205ENST00000626021 A0A1B0GTH6 734 aa4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 A6NNZ2 444 aa4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 NEURL1BA8MQ27 555 aa4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 TMEM232C9JQI7 657 aa4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 AKR1B15C9JRZ8 316 aaPredicted RBP4.74□□□□□ -1.65
PTP4A1-205ENST00000626021 BIN1O00499 593 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms