RNA–Protein interactions for RNA: ENST00000625778.2

UBE3A-209, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-209ENST00000625778 DDX17Q92841 729 aaKnown RBP15.75■□□□□ 0.11
UBE3A-209ENST00000625778 EEF2KMTQ96G04 330 aa15.75■□□□□ 0.11
UBE3A-209ENST00000625778 NBPF3Q9H094 633 aa15.75■□□□□ 0.11
UBE3A-209ENST00000625778 CTNND2Q9UQB3 1225 aa15.75■□□□□ 0.11
UBE3A-209ENST00000625778 LRRIQ3A6PVS8 624 aaPredicted RBP15.74■□□□□ 0.11
UBE3A-209ENST00000625778 SRGAP2O75044 1071 aa15.74■□□□□ 0.11
UBE3A-209ENST00000625778 ZNF18P17022 549 aa15.74■□□□□ 0.11
UBE3A-209ENST00000625778 TTC31Q49AM3 519 aaPredicted RBP15.74■□□□□ 0.11
UBE3A-209ENST00000625778 NAPGQ99747 312 aaPredicted RBP15.74■□□□□ 0.11
UBE3A-209ENST00000625778 TAB2Q9NYJ8 693 aa15.74■□□□□ 0.11
UBE3A-209ENST00000625778 IVLP07476 585 aa15.74■□□□□ 0.11
UBE3A-209ENST00000625778 CD44P16070 742 aaKnown RBP15.74■□□□□ 0.11
UBE3A-209ENST00000625778 TOB1P50616 345 aaPredicted RBP15.74■□□□□ 0.11
UBE3A-209ENST00000625778 MRPS25P82663 173 aaKnown RBP15.74■□□□□ 0.11
UBE3A-209ENST00000625778 NR1I3Q14994 352 aa15.74■□□□□ 0.11
UBE3A-209ENST00000625778 IFNL2Q8IZJ0 200 aa15.74■□□□□ 0.11
UBE3A-209ENST00000625778 HELBQ8NG08 1087 aaPredicted RBP15.74■□□□□ 0.11
UBE3A-209ENST00000625778 AIDAQ96BJ3 306 aa15.74■□□□□ 0.11
UBE3A-209ENST00000625778 EIF3CLB5ME19 914 aaKnown RBP15.73■□□□□ 0.11
UBE3A-209ENST00000625778 H7C1W4 665 aa15.73■□□□□ 0.11
UBE3A-209ENST00000625778 EIF3CQ99613 913 aaKnown RBP15.73■□□□□ 0.11
UBE3A-209ENST00000625778 L1RE1Q9UN81 338 aa15.73■□□□□ 0.11
UBE3A-209ENST00000625778 GPTP24298 496 aa15.73■□□□□ 0.11
UBE3A-209ENST00000625778 PLCD1P51178 756 aa15.73■□□□□ 0.11
UBE3A-209ENST00000625778 DNAJC21Q5F1R6 531 aaKnown RBP15.73■□□□□ 0.11
UBE3A-209ENST00000625778 ICE2Q659A1 982 aa15.73■□□□□ 0.11
UBE3A-209ENST00000625778 LRP10Q7Z4F1 713 aa15.73■□□□□ 0.11
UBE3A-209ENST00000625778 TRIM22Q8IYM9 498 aa15.73■□□□□ 0.11
UBE3A-209ENST00000625778 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.73■□□□□ 0.11
UBE3A-209ENST00000625778 ZFYP08048 801 aaPredicted RBP15.73■□□□□ 0.11
UBE3A-209ENST00000625778 PPARDQ03181 441 aa15.73■□□□□ 0.11
UBE3A-209ENST00000625778 MED1Q15648 1581 aaPredicted RBP15.73■□□□□ 0.11
UBE3A-209ENST00000625778 CAGE1Q8TC20 777 aa15.73■□□□□ 0.11
UBE3A-209ENST00000625778 RGPD2P0DJD1 1756 aa15.72■□□□□ 0.11
UBE3A-209ENST00000625778 KDM3BQ7LBC6 1761 aa15.72■□□□□ 0.11
UBE3A-209ENST00000625778 RNF40O75150 1001 aa15.72■□□□□ 0.11
UBE3A-209ENST00000625778 MDM2Q00987 491 aaPredicted RBP15.72■□□□□ 0.11
UBE3A-209ENST00000625778 MORC3Q14149 939 aa15.72■□□□□ 0.11
UBE3A-209ENST00000625778 TTC19Q6DKK2 380 aaPredicted RBP15.72■□□□□ 0.11
UBE3A-209ENST00000625778 CNNM1Q9NRU3 951 aa15.72■□□□□ 0.11
UBE3A-209ENST00000625778 ZNF532Q9HCE3 1301 aa15.72■□□□□ 0.11
UBE3A-209ENST00000625778 MFAP3LO75121 409 aa15.72■□□□□ 0.11
UBE3A-209ENST00000625778 MCAMP43121 646 aa15.72■□□□□ 0.11
UBE3A-209ENST00000625778 NAPBQ9H115 298 aa15.72■□□□□ 0.11
UBE3A-209ENST00000625778 FBXO2Q9UK22 296 aaPredicted RBP15.72■□□□□ 0.11
UBE3A-209ENST00000625778 PRDM1O75626 825 aa15.72■□□□□ 0.11
UBE3A-209ENST00000625778 PACS2Q86VP3 889 aa15.72■□□□□ 0.11
UBE3A-209ENST00000625778 SNAP23O00161 211 aa15.71■□□□□ 0.11
UBE3A-209ENST00000625778 MICALL1Q8N3F8 863 aa15.71■□□□□ 0.11
UBE3A-209ENST00000625778 ZSWIM5Q9P217 1185 aa15.71■□□□□ 0.11
UBE3A-209ENST00000625778 WWC3Q9ULE0 1092 aa15.71■□□□□ 0.11
UBE3A-209ENST00000625778 JRKLQ9Y4A0 524 aa15.71■□□□□ 0.11
UBE3A-209ENST00000625778 A0A1B0GTH6 734 aa15.71■□□□□ 0.11
UBE3A-209ENST00000625778 POTEB2H3BUK9 544 aa15.71■□□□□ 0.11
UBE3A-209ENST00000625778 CYP27B1O15528 508 aa15.71■□□□□ 0.11
UBE3A-209ENST00000625778 GYPCP04921 128 aa15.71■□□□□ 0.11
UBE3A-209ENST00000625778 CT47A1Q5JQC4 288 aaPredicted RBP15.71■□□□□ 0.11
UBE3A-209ENST00000625778 SAMD1Q6SPF0 538 aaPredicted RBP15.71■□□□□ 0.11
UBE3A-209ENST00000625778 LRRC31Q6UY01 552 aa15.71■□□□□ 0.11
UBE3A-209ENST00000625778 LDHAL6AQ6ZMR3 332 aa15.71■□□□□ 0.11
UBE3A-209ENST00000625778 SMARCC1Q92922 1105 aaPredicted RBP15.71■□□□□ 0.11
UBE3A-209ENST00000625778 DEF6Q9H4E7 631 aa15.71■□□□□ 0.11
UBE3A-209ENST00000625778 LAMA4Q16363 1823 aa15.7■□□□□ 0.1
UBE3A-209ENST00000625778 RNF225M0QZC1 329 aaPredicted RBP15.7■□□□□ 0.1
UBE3A-209ENST00000625778 KRT9P35527 623 aa15.7■□□□□ 0.1
UBE3A-209ENST00000625778 IFIT5Q13325 482 aaKnown RBP15.7■□□□□ 0.1
UBE3A-209ENST00000625778 RTN1Q16799 776 aa15.7■□□□□ 0.1
UBE3A-209ENST00000625778 RRAGBQ5VZM2 374 aa15.7■□□□□ 0.1
UBE3A-209ENST00000625778 CCDC148Q8NFR7 591 aa15.7■□□□□ 0.1
UBE3A-209ENST00000625778 PANX2Q96RD6 677 aa15.7■□□□□ 0.1
UBE3A-209ENST00000625778 MYCBPQ99417 103 aaPredicted RBP15.7■□□□□ 0.1
UBE3A-209ENST00000625778 PIH1D3Q9NQM4 214 aaKnown RBP15.7■□□□□ 0.1
UBE3A-209ENST00000625778 FAM217BQ9NTX9 383 aaPredicted RBP15.7■□□□□ 0.1
UBE3A-209ENST00000625778 VPS54Q9P1Q0 977 aa15.7■□□□□ 0.1
UBE3A-209ENST00000625778 MYO6Q9UM54 1294 aa15.7■□□□□ 0.1
UBE3A-209ENST00000625778 CPDO75976 1380 aa15.7■□□□□ 0.1
UBE3A-209ENST00000625778 A0A087X0B3 334 aa15.7■□□□□ 0.1
UBE3A-209ENST00000625778 PTPREP23469 700 aa15.7■□□□□ 0.1
UBE3A-209ENST00000625778 NOP2P46087 812 aaKnown RBP15.7■□□□□ 0.1
UBE3A-209ENST00000625778 ERVK-24P63145 666 aa15.7■□□□□ 0.1
UBE3A-209ENST00000625778 ZNF174Q15697 407 aa15.7■□□□□ 0.1
UBE3A-209ENST00000625778 CHP1Q99653 195 aa15.7■□□□□ 0.1
UBE3A-209ENST00000625778 ACBD3Q9H3P7 528 aa15.7■□□□□ 0.1
UBE3A-209ENST00000625778 EFCC1Q9HA90 598 aa15.7■□□□□ 0.1
UBE3A-209ENST00000625778 LY9Q9HBG7 655 aa15.7■□□□□ 0.1
UBE3A-209ENST00000625778 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.7■□□□□ 0.1
UBE3A-209ENST00000625778 MATR3P43243 847 aaKnown RBP eCLIP15.7■□□□□ 0.18e-11■■■■■ 38.8
UBE3A-209ENST00000625778 NTRK3Q16288 839 aa15.7■□□□□ 0.1
UBE3A-209ENST00000625778 CTR9Q6PD62 1173 aa15.7■□□□□ 0.1
UBE3A-209ENST00000625778 AFAP1L1Q8TED9 768 aa15.7■□□□□ 0.1
UBE3A-209ENST00000625778 ARMT1Q9H993 441 aa15.7■□□□□ 0.1
UBE3A-209ENST00000625778 ATG3Q9NT62 314 aa15.7■□□□□ 0.1
UBE3A-209ENST00000625778 KDM6AO15550 1401 aaPredicted RBP15.69■□□□□ 0.1
UBE3A-209ENST00000625778 MMP1P03956 469 aa15.69■□□□□ 0.1
UBE3A-209ENST00000625778 TDO2P48775 406 aa15.69■□□□□ 0.1
UBE3A-209ENST00000625778 SPATA1Q5VX52 437 aa15.69■□□□□ 0.1
UBE3A-209ENST00000625778 KRT28Q7Z3Y7 464 aa15.69■□□□□ 0.1
UBE3A-209ENST00000625778 GBP3Q9H0R5 595 aa15.69■□□□□ 0.1
UBE3A-209ENST00000625778 POLD4Q9HCU8 107 aa15.69■□□□□ 0.1
UBE3A-209ENST00000625778 GPR108Q9NPR9 543 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms