RNA–Protein interactions for RNA: ENST00000625766.2

CCDC163-201, Transcript of coiled-coil domain containing 163, humanhuman

TSL 1 (best)

Gene CCDC163, Length 2,053 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163-201ENST00000625766 WASF1Q92558 559 aa13.67□□□□□ -0.22
CCDC163-201ENST00000625766 GZF1Q9H116 711 aaPredicted RBP13.67□□□□□ -0.22
CCDC163-201ENST00000625766 IL17RBQ9NRM6 502 aa13.67□□□□□ -0.22
CCDC163-201ENST00000625766 RBM28Q9NW13 759 aaKnown RBP13.67□□□□□ -0.22
CCDC163-201ENST00000625766 TAOK2Q9UL54 1235 aa13.67□□□□□ -0.22
CCDC163-201ENST00000625766 ATF5Q9Y2D1 282 aaPredicted RBP13.67□□□□□ -0.22
CCDC163-201ENST00000625766 KIF13BQ9NQT8 1826 aa13.66□□□□□ -0.22
CCDC163-201ENST00000625766 YDJCA8MPS7 323 aa13.66□□□□□ -0.22
CCDC163-201ENST00000625766 GADD45BO75293 160 aaPredicted RBP13.66□□□□□ -0.22
CCDC163-201ENST00000625766 RASA1P20936 1047 aa13.66□□□□□ -0.22
CCDC163-201ENST00000625766 SCNN1DP51172 638 aa13.66□□□□□ -0.22
CCDC163-201ENST00000625766 GABPAQ06546 454 aa13.66□□□□□ -0.22
CCDC163-201ENST00000625766 CCDC144CPQ8IYA2 1237 aa13.66□□□□□ -0.22
CCDC163-201ENST00000625766 SGIP1Q9BQI5 828 aa13.66□□□□□ -0.22
CCDC163-201ENST00000625766 SAP30BPQ9UHR5 308 aaKnown RBP13.66□□□□□ -0.22
CCDC163-201ENST00000625766 ISY1Q9ULR0 285 aaKnown RBP13.66□□□□□ -0.22
CCDC163-201ENST00000625766 DLEC1Q9Y238 1755 aa13.66□□□□□ -0.22
CCDC163-201ENST00000625766 PPFIA3O75145 1194 aa13.65□□□□□ -0.22
CCDC163-201ENST00000625766 VIL1P09327 827 aaKnown RBP13.65□□□□□ -0.22
CCDC163-201ENST00000625766 NOVP48745 357 aa13.65□□□□□ -0.22
CCDC163-201ENST00000625766 FAM173BQ6P4H8 233 aa13.65□□□□□ -0.22
CCDC163-201ENST00000625766 NEDD1Q8NHV4 660 aa13.65□□□□□ -0.22
CCDC163-201ENST00000625766 PHKBQ93100 1093 aa13.65□□□□□ -0.22
CCDC163-201ENST00000625766 ALG1Q9BT22 464 aa13.65□□□□□ -0.22
CCDC163-201ENST00000625766 IDI2Q9BXS1 227 aa13.65□□□□□ -0.22
CCDC163-201ENST00000625766 CD2APQ9Y5K6 639 aa13.65□□□□□ -0.22
CCDC163-201ENST00000625766 TCHHQ07283 1943 aa13.65□□□□□ -0.22
CCDC163-201ENST00000625766 FUT2Q10981 343 aa13.65□□□□□ -0.22
CCDC163-201ENST00000625766 KIAA0825Q8IV33 1275 aa13.65□□□□□ -0.22
CCDC163-201ENST00000625766 TRIM22Q8IYM9 498 aa13.65□□□□□ -0.22
CCDC163-201ENST00000625766 NUP133Q8WUM0 1156 aa13.65□□□□□ -0.22
CCDC163-201ENST00000625766 UPF1Q92900 1129 aaKnown RBP eCLIP13.65□□□□□ -0.22
CCDC163-201ENST00000625766 RCOR1Q9UKL0 485 aa13.65□□□□□ -0.22
CCDC163-201ENST00000625766 FSD2A1L4K1 749 aa13.64□□□□□ -0.23
CCDC163-201ENST00000625766 NMT2O60551 498 aa13.64□□□□□ -0.23
CCDC163-201ENST00000625766 DEXIO95424 95 aa13.64□□□□□ -0.23
CCDC163-201ENST00000625766 TSPY3P0CV98 308 aa13.64□□□□□ -0.23
CCDC163-201ENST00000625766 TSPY8P0CW00 308 aa13.64□□□□□ -0.23
CCDC163-201ENST00000625766 DALRD3Q5D0E6 543 aaKnown RBP13.64□□□□□ -0.23
CCDC163-201ENST00000625766 BRAPQ7Z569 592 aa13.64□□□□□ -0.23
CCDC163-201ENST00000625766 KLHL34Q8N239 644 aa13.64□□□□□ -0.23
CCDC163-201ENST00000625766 ZNF396Q96N95 335 aaPredicted RBP13.64□□□□□ -0.23
CCDC163-201ENST00000625766 RNF26Q9BY78 433 aaPredicted RBP13.64□□□□□ -0.23
CCDC163-201ENST00000625766 DDX4Q9NQI0 724 aaKnown RBP13.64□□□□□ -0.23
CCDC163-201ENST00000625766 MYO3BQ8WXR4 1341 aa13.64□□□□□ -0.23
CCDC163-201ENST00000625766 LAMB1P07942 1786 aa13.64□□□□□ -0.23
CCDC163-201ENST00000625766 PRPF3O43395 683 aaKnown RBP13.63□□□□□ -0.23
CCDC163-201ENST00000625766 FIBPO43427 364 aa13.63□□□□□ -0.23
CCDC163-201ENST00000625766 ILDR1Q86SU0 546 aaPredicted RBP13.63□□□□□ -0.23
CCDC163-201ENST00000625766 LEO1Q8WVC0 666 aaPredicted RBP13.63□□□□□ -0.23
CCDC163-201ENST00000625766 SLC26A6Q9BXS9 759 aa13.63□□□□□ -0.23
CCDC163-201ENST00000625766 OSBPL5Q9H0X9 879 aaPredicted RBP13.63□□□□□ -0.23
CCDC163-201ENST00000625766 TFIP11Q9UBB9 837 aaKnown RBP13.63□□□□□ -0.23
CCDC163-201ENST00000625766 SWAP70Q9UH65 585 aa13.63□□□□□ -0.23
CCDC163-201ENST00000625766 ZNF445P59923 1031 aa13.63□□□□□ -0.23
CCDC163-201ENST00000625766 GUCY1B3Q02153 619 aa13.63□□□□□ -0.23
CCDC163-201ENST00000625766 R3HDM1Q15032 1099 aaKnown RBP13.63□□□□□ -0.23
CCDC163-201ENST00000625766 KRT40Q6A162 431 aa13.63□□□□□ -0.23
CCDC163-201ENST00000625766 OTUD7BQ6GQQ9 843 aa13.63□□□□□ -0.23
CCDC163-201ENST00000625766 CAVIN1Q6NZI2 390 aaKnown RBP13.63□□□□□ -0.23
CCDC163-201ENST00000625766 RSBN1LQ6PCB5 846 aaPredicted RBP13.63□□□□□ -0.23
CCDC163-201ENST00000625766 LARGE2Q8N3Y3 721 aa13.63□□□□□ -0.23
CCDC163-201ENST00000625766 SLC44A5Q8NCS7 719 aa13.63□□□□□ -0.23
CCDC163-201ENST00000625766 GMLQ99445 158 aa13.63□□□□□ -0.23
CCDC163-201ENST00000625766 DHX36Q9H2U1 1008 aaKnown RBP13.63□□□□□ -0.23
CCDC163-201ENST00000625766 SCN9AQ15858 1988 aa13.63□□□□□ -0.23
CCDC163-201ENST00000625766 U2AF2P26368 475 aaKnown RBP eCLIP13.62□□□□□ -0.23
CCDC163-201ENST00000625766 KIF23Q02241 960 aaPredicted RBP13.62□□□□□ -0.23
CCDC163-201ENST00000625766 SLC4A8Q2Y0W8 1093 aa13.62□□□□□ -0.23
CCDC163-201ENST00000625766 SPATA32Q96LK8 384 aa13.62□□□□□ -0.23
CCDC163-201ENST00000625766 EHD4Q9H223 541 aa13.62□□□□□ -0.23
CCDC163-201ENST00000625766 KAT14Q9H8E8 782 aa13.62□□□□□ -0.23
CCDC163-201ENST00000625766 ZNF277Q9NRM2 450 aaPredicted RBP13.62□□□□□ -0.23
CCDC163-201ENST00000625766 ZNRF3Q9ULT6 936 aa13.62□□□□□ -0.23
CCDC163-201ENST00000625766 CDK5RAP2Q96SN8 1893 aa13.62□□□□□ -0.23
CCDC163-201ENST00000625766 PICALMQ13492 652 aa13.62□□□□□ -0.23
CCDC163-201ENST00000625766 TMTC3Q6ZXV5 915 aa13.62□□□□□ -0.23
CCDC163-201ENST00000625766 CTCFLQ8NI51 663 aaPredicted RBP13.62□□□□□ -0.23
CCDC163-201ENST00000625766 AIFM3Q96NN9 605 aa13.62□□□□□ -0.23
CCDC163-201ENST00000625766 TMEM63CQ9P1W3 806 aa13.62□□□□□ -0.23
CCDC163-201ENST00000625766 SERPINB13Q9UIV8 391 aa13.62□□□□□ -0.23
CCDC163-201ENST00000625766 KIF5BP33176 963 aa13.61□□□□□ -0.23
CCDC163-201ENST00000625766 NFIAQ12857 509 aa13.61□□□□□ -0.23
CCDC163-201ENST00000625766 TRIM29Q14134 588 aa13.61□□□□□ -0.23
CCDC163-201ENST00000625766 ZSCAN23Q3MJ62 389 aa13.61□□□□□ -0.23
CCDC163-201ENST00000625766 PNMA1Q8ND90 353 aa13.61□□□□□ -0.23
CCDC163-201ENST00000625766 SYAP1Q96A49 352 aaPredicted RBP13.61□□□□□ -0.23
CCDC163-201ENST00000625766 GJB4Q9NTQ9 266 aa13.61□□□□□ -0.23
CCDC163-201ENST00000625766 RTEL1Q9NZ71 1219 aa13.61□□□□□ -0.23
CCDC163-201ENST00000625766 DDX60LQ5H9U9 1706 aaKnown RBP13.61□□□□□ -0.23
CCDC163-201ENST00000625766 NAV1Q8NEY1 1877 aa13.6□□□□□ -0.23
CCDC163-201ENST00000625766 HLA-DOAP06340 250 aa13.6□□□□□ -0.23
CCDC163-201ENST00000625766 GUCY1A2P33402 732 aa13.6□□□□□ -0.23
CCDC163-201ENST00000625766 GNAQP50148 359 aa13.6□□□□□ -0.23
CCDC163-201ENST00000625766 MMP14P50281 582 aa13.6□□□□□ -0.23
CCDC163-201ENST00000625766 FOSBP53539 338 aa13.6□□□□□ -0.23
CCDC163-201ENST00000625766 PKN1Q16512 942 aa13.6□□□□□ -0.23
CCDC163-201ENST00000625766 METTL16Q86W50 562 aaKnown RBP13.6□□□□□ -0.23
CCDC163-201ENST00000625766 FOXP4Q8IVH2 680 aaPredicted RBP13.6□□□□□ -0.23
CCDC163-201ENST00000625766 AGBL3Q8NEM8 1001 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms