RNA–Protein interactions for RNA: ENST00000625681.2

UBE3A-208, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-208	ENST00000625681	XRCC5	P13010	732 aa	Known RBP	27.77	■■■□□ 2.04
UBE3A-208	ENST00000625681	ARID4A	P29374	1257 aa	Predicted RBP	27.77	■■■□□ 2.04
UBE3A-208	ENST00000625681	CCND3	P30281	292 aa	Predicted RBP	27.77	■■■□□ 2.04
UBE3A-208	ENST00000625681	MAPKAPK5	Q8IW41	473 aa		27.77	■■■□□ 2.04
UBE3A-208	ENST00000625681	TGFBRAP1	Q8WUH2	860 aa		27.77	■■■□□ 2.04
UBE3A-208	ENST00000625681	PORCN	Q9H237	461 aa		27.77	■■■□□ 2.04
UBE3A-208	ENST00000625681	DNAJC18	Q9H819	358 aa		27.77	■■■□□ 2.04
UBE3A-208	ENST00000625681	COL2A1	P02458	1487 aa	Predicted RBP	27.76	■■■□□ 2.04
UBE3A-208	ENST00000625681	ASNS	P08243	561 aa		27.76	■■■□□ 2.03
UBE3A-208	ENST00000625681	ZKSCAN1	P17029	563 aa	Predicted RBP	27.76	■■■□□ 2.03
UBE3A-208	ENST00000625681	LRRC26	Q2I0M4	334 aa		27.76	■■■□□ 2.03
UBE3A-208	ENST00000625681	LHX8	Q68G74	356 aa		27.76	■■■□□ 2.03
UBE3A-208	ENST00000625681	POTEE	Q6S8J3	1075 aa		27.76	■■■□□ 2.03
UBE3A-208	ENST00000625681	NOL10	Q9BSC4	688 aa	Known RBP	27.76	■■■□□ 2.03
UBE3A-208	ENST00000625681	DHX36	Q9H2U1	1008 aa	Known RBP	27.76	■■■□□ 2.03
UBE3A-208	ENST00000625681	LAMA2	P24043	3122 aa	Known RBP	27.76	■■■□□ 2.03
UBE3A-208	ENST00000625681	GNAI3	P08754	354 aa		27.75	■■■□□ 2.03
UBE3A-208	ENST00000625681	COL6A1	P12109	1028 aa		27.75	■■■□□ 2.03
UBE3A-208	ENST00000625681	MDM2	Q00987	491 aa	Predicted RBP	27.75	■■■□□ 2.03
UBE3A-208	ENST00000625681	MTX1	Q13505	466 aa		27.75	■■■□□ 2.03
UBE3A-208	ENST00000625681	PDE3A	Q14432	1141 aa		27.75	■■■□□ 2.03
UBE3A-208	ENST00000625681	CCAR1	Q8IX12	1150 aa	Known RBP	27.75	■■■□□ 2.03
UBE3A-208	ENST00000625681	SOCS4	Q8WXH5	440 aa		27.75	■■■□□ 2.03
UBE3A-208	ENST00000625681	USP6NL	Q92738	828 aa		27.75	■■■□□ 2.03
UBE3A-208	ENST00000625681	PAGR1	Q9BTK6	254 aa		27.75	■■■□□ 2.03
UBE3A-208	ENST00000625681	PALD1	Q9ULE6	856 aa		27.75	■■■□□ 2.03
UBE3A-208	ENST00000625681	USP17L10	C9JJH3	530 aa		27.74	■■■□□ 2.03
UBE3A-208	ENST00000625681	MAPK4	P31152	587 aa		27.74	■■■□□ 2.03
UBE3A-208	ENST00000625681	NAA16	Q6N069	864 aa	Predicted RBP	27.74	■■■□□ 2.03
UBE3A-208	ENST00000625681	ADGRA1	Q86SQ6	560 aa		27.74	■■■□□ 2.03
UBE3A-208	ENST00000625681	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	27.74	■■■□□ 2.03
UBE3A-208	ENST00000625681	LOC285556	D6RIA3	1793 aa		27.73	■■■□□ 2.03
UBE3A-208	ENST00000625681	DNAH12	Q6ZR08	3092 aa		27.73	■■■□□ 2.03
UBE3A-208	ENST00000625681	C19orf81	C9J6K1	198 aa		27.73	■■■□□ 2.03
UBE3A-208	ENST00000625681	BAG3	O95817	575 aa		27.73	■■■□□ 2.03
UBE3A-208	ENST00000625681	ERVK-9	P63128	1117 aa		27.73	■■■□□ 2.03
UBE3A-208	ENST00000625681	ERVK-24	P63145	666 aa		27.73	■■■□□ 2.03
UBE3A-208	ENST00000625681	MORN1	Q5T089	497 aa		27.73	■■■□□ 2.03
UBE3A-208	ENST00000625681	GPR142	Q7Z601	462 aa		27.73	■■■□□ 2.03
UBE3A-208	ENST00000625681	FOXP4	Q8IVH2	680 aa	Predicted RBP	27.73	■■■□□ 2.03
UBE3A-208	ENST00000625681	EMILIN3	Q9NT22	766 aa		27.73	■■■□□ 2.03
UBE3A-208	ENST00000625681	SAP30BP	Q9UHR5	308 aa	Known RBP	27.73	■■■□□ 2.03
UBE3A-208	ENST00000625681	G3BP1	Q13283	466 aa	Known RBP eCLIP	27.72	■■■□□ 2.03
UBE3A-208	ENST00000625681	TRMT44	Q8IYL2	757 aa	Known RBP	27.72	■■■□□ 2.03
UBE3A-208	ENST00000625681	TRIM34	Q9BYJ4	488 aa		27.72	■■■□□ 2.03
UBE3A-208	ENST00000625681	NDUFB9	Q9Y6M9	179 aa		27.72	■■■□□ 2.03
UBE3A-208	ENST00000625681	DDX60L	Q5H9U9	1706 aa	Known RBP	27.72	■■■□□ 2.03
UBE3A-208	ENST00000625681	CUL9	Q8IWT3	2517 aa		27.72	■■■□□ 2.03
UBE3A-208	ENST00000625681	FLT1	P17948	1338 aa		27.71	■■■□□ 2.03
UBE3A-208	ENST00000625681	PNMA6E	A0A0J9YXQ4	647 aa		27.71	■■■□□ 2.03
UBE3A-208	ENST00000625681	CT47B1	P0C2W7	299 aa	Predicted RBP	27.71	■■■□□ 2.03
UBE3A-208	ENST00000625681	UQCRFS1P1	P0C7P4	283 aa		27.71	■■■□□ 2.03
UBE3A-208	ENST00000625681	RGS2	P41220	211 aa		27.71	■■■□□ 2.03
UBE3A-208	ENST00000625681	PLEKHH3	Q7Z736	793 aa		27.71	■■■□□ 2.03
UBE3A-208	ENST00000625681	METTL16	Q86W50	562 aa	Known RBP	27.71	■■■□□ 2.03
UBE3A-208	ENST00000625681	ZBTB21	Q9ULJ3	1066 aa		27.71	■■■□□ 2.03
UBE3A-208	ENST00000625681	PLXNB2	O15031	1838 aa		27.7	■■■□□ 2.02
UBE3A-208	ENST00000625681	RARS	P54136	660 aa	Known RBP	27.7	■■■□□ 2.02
UBE3A-208	ENST00000625681	PPP4C	P60510	307 aa		27.7	■■■□□ 2.02
UBE3A-208	ENST00000625681	PLCG2	P16885	1265 aa		27.68	■■■□□ 2.02
UBE3A-208	ENST00000625681	CWC22	Q9HCG8	908 aa	Known RBP	27.68	■■■□□ 2.02
UBE3A-208	ENST00000625681	TNN	Q9UQP3	1299 aa		27.68	■■■□□ 2.02
UBE3A-208	ENST00000625681	GNAI2	P04899	355 aa		27.67	■■■□□ 2.02
UBE3A-208	ENST00000625681	CYP2E1	P05181	493 aa	Predicted RBP	27.67	■■■□□ 2.02
UBE3A-208	ENST00000625681	DYNLL1	P63167	89 aa	Known RBP	27.67	■■■□□ 2.02
UBE3A-208	ENST00000625681	ZYX	Q15942	572 aa	Known RBP	27.67	■■■□□ 2.02
UBE3A-208	ENST00000625681	TTC39A	Q5SRH9	613 aa		27.67	■■■□□ 2.02
UBE3A-208	ENST00000625681	USP17L2	Q6R6M4	530 aa		27.67	■■■□□ 2.02
UBE3A-208	ENST00000625681	EDC3	Q96F86	508 aa	Known RBP	27.67	■■■□□ 2.02
UBE3A-208	ENST00000625681	APBA2	Q99767	749 aa		27.67	■■■□□ 2.02
UBE3A-208	ENST00000625681	SENP6	Q9GZR1	1112 aa	Predicted RBP	27.67	■■■□□ 2.02
UBE3A-208	ENST00000625681	FLRT1	Q9NZU1	646 aa		27.67	■■■□□ 2.02
UBE3A-208	ENST00000625681	CNMD	O75829	334 aa		27.66	■■■□□ 2.02
UBE3A-208	ENST00000625681	GH2	P01242	217 aa		27.66	■■■□□ 2.02
UBE3A-208	ENST00000625681	ARHGAP45	Q92619	1136 aa		27.66	■■■□□ 2.02
UBE3A-208	ENST00000625681	DBNDD2	Q9BQY9	259 aa		27.66	■■■□□ 2.02
UBE3A-208	ENST00000625681	MAP2K5	Q13163	448 aa		27.65	■■■□□ 2.02
UBE3A-208	ENST00000625681	WDR78	Q5VTH9	848 aa		27.65	■■■□□ 2.02
UBE3A-208	ENST00000625681	FAM161B	Q96MY7	647 aa		27.65	■■■□□ 2.02
UBE3A-208	ENST00000625681	GINM1	Q9NU53	330 aa		27.65	■■■□□ 2.02
UBE3A-208	ENST00000625681	POTEB2	H3BUK9	544 aa		27.64	■■■□□ 2.02
UBE3A-208	ENST00000625681	ATN1	P54259	1190 aa	Predicted RBP	27.64	■■■□□ 2.02
UBE3A-208	ENST00000625681	COL25A1	Q9BXS0	654 aa	Predicted RBP	27.64	■■■□□ 2.02
UBE3A-208	ENST00000625681	PIH1D3	Q9NQM4	214 aa	Known RBP	27.64	■■■□□ 2.02
UBE3A-208	ENST00000625681	ATAD5	Q96QE3	1844 aa		27.64	■■■□□ 2.01
UBE3A-208	ENST00000625681	CCDC158	Q5M9N0	1113 aa		27.63	■■■□□ 2.01
UBE3A-208	ENST00000625681	GTF3C2	Q8WUA4	911 aa	Predicted RBP	27.63	■■■□□ 2.01
UBE3A-208	ENST00000625681	GUCD1	Q96NT3	240 aa		27.63	■■■□□ 2.01
UBE3A-208	ENST00000625681	RABGAP1	Q9Y3P9	1069 aa		27.63	■■■□□ 2.01
UBE3A-208	ENST00000625681	HLA-DOA	P06340	250 aa		27.62	■■■□□ 2.01
UBE3A-208	ENST00000625681	CNGA1	P29973	690 aa		27.62	■■■□□ 2.01
UBE3A-208	ENST00000625681	ZAP70	P43403	619 aa		27.62	■■■□□ 2.01
UBE3A-208	ENST00000625681	TNNI3K	Q59H18	835 aa		27.62	■■■□□ 2.01
UBE3A-208	ENST00000625681	FPGT-TNNI3K	V9GXZ4	949 aa		27.62	■■■□□ 2.01
UBE3A-208	ENST00000625681	VCAN	P13611	3396 aa		27.62	■■■□□ 2.01
UBE3A-208	ENST00000625681	USP17L15	C9J2P7	530 aa		27.61	■■■□□ 2.01
UBE3A-208	ENST00000625681	USP17L13	C9JLJ4	530 aa		27.61	■■■□□ 2.01
UBE3A-208	ENST00000625681	USP17L11	C9JVI0	530 aa		27.61	■■■□□ 2.01
UBE3A-208	ENST00000625681	USP17L18	D6R9N7	530 aa		27.61	■■■□□ 2.01
UBE3A-208	ENST00000625681	USP17L22	D6RA61	530 aa		27.61	■■■□□ 2.01

Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms