RNA–Protein interactions for RNA: ENST00000625617.2

TUBB3-215, Transcript of tubulin beta 3 class III, humanhuman

TSL 4 BASIC

Gene TUBB3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-215ENST00000625617 ZBTB21Q9ULJ3 1066 aa17.7■□□□□ 0.42
TUBB3-215ENST00000625617 GDF11O95390 407 aa17.69■□□□□ 0.42
TUBB3-215ENST00000625617 SAP30BPQ9UHR5 308 aaKnown RBP17.69■□□□□ 0.42
TUBB3-215ENST00000625617 NOP58Q9Y2X3 529 aaKnown RBP17.69■□□□□ 0.42
TUBB3-215ENST00000625617 SIPA1L1O43166 1804 aa17.68■□□□□ 0.42
TUBB3-215ENST00000625617 C19orf81C9J6K1 198 aa17.68■□□□□ 0.42
TUBB3-215ENST00000625617 USP17L10C9JJH3 530 aa17.68■□□□□ 0.42
TUBB3-215ENST00000625617 IDH1O75874 414 aaKnown RBP17.68■□□□□ 0.42
TUBB3-215ENST00000625617 CYP7A1P22680 504 aa17.68■□□□□ 0.42
TUBB3-215ENST00000625617 HOXA7P31268 230 aaPredicted RBP17.68■□□□□ 0.42
TUBB3-215ENST00000625617 JAG1P78504 1218 aa17.68■□□□□ 0.42
TUBB3-215ENST00000625617 SHROOM1Q2M3G4 852 aaPredicted RBP17.68■□□□□ 0.42
TUBB3-215ENST00000625617 CERS3Q8IU89 383 aa17.68■□□□□ 0.42
TUBB3-215ENST00000625617 SOCS4Q8WXH5 440 aa17.68■□□□□ 0.42
TUBB3-215ENST00000625617 PRO3102Q9H379 93 aa17.68■□□□□ 0.42
TUBB3-215ENST00000625617 GJD2Q9UKL4 321 aa17.68■□□□□ 0.42
TUBB3-215ENST00000625617 ATAD5Q96QE3 1844 aa17.68■□□□□ 0.42
TUBB3-215ENST00000625617 HERVK_113P62684 666 aa17.67■□□□□ 0.42
TUBB3-215ENST00000625617 DYNLL1P63167 89 aaKnown RBP17.67■□□□□ 0.42
TUBB3-215ENST00000625617 NECAB2Q7Z6G3 386 aa17.67■□□□□ 0.42
TUBB3-215ENST00000625617 PAWRQ96IZ0 340 aaKnown RBP17.67■□□□□ 0.42
TUBB3-215ENST00000625617 CCDC8Q9H0W5 538 aaPredicted RBP17.67■□□□□ 0.42
TUBB3-215ENST00000625617 HMX1Q9NP08 348 aaPredicted RBP17.67■□□□□ 0.42
TUBB3-215ENST00000625617 RPTORQ8N122 1335 aa17.67■□□□□ 0.42
TUBB3-215ENST00000625617 RLBP1P12271 317 aa17.66■□□□□ 0.42
TUBB3-215ENST00000625617 HNRNPUQ00839 825 aaKnown RBP eCLIP17.66■□□□□ 0.42
TUBB3-215ENST00000625617 TRIM32Q13049 653 aa17.66■□□□□ 0.42
TUBB3-215ENST00000625617 PDE3AQ14432 1141 aa17.66■□□□□ 0.42
TUBB3-215ENST00000625617 ANKLE1Q8NAG6 615 aa17.66■□□□□ 0.42
TUBB3-215ENST00000625617 MIGA1Q8NAN2 632 aa17.66■□□□□ 0.42
TUBB3-215ENST00000625617 GPRC5AQ8NFJ5 357 aa17.66■□□□□ 0.42
TUBB3-215ENST00000625617 DIS3LQ8TF46 1054 aaKnown RBP17.66■□□□□ 0.42
TUBB3-215ENST00000625617 GTF3C2Q8WUA4 911 aaPredicted RBP17.66■□□□□ 0.42
TUBB3-215ENST00000625617 TRIB2Q92519 343 aa17.66■□□□□ 0.42
TUBB3-215ENST00000625617 EAF2Q96CJ1 260 aaPredicted RBP17.66■□□□□ 0.42
TUBB3-215ENST00000625617 P2RX7Q99572 595 aaKnown RBP17.66■□□□□ 0.42
TUBB3-215ENST00000625617 TXNRD2Q9NNW7 524 aa17.66■□□□□ 0.42
TUBB3-215ENST00000625617 USP5P45974 858 aa17.65■□□□□ 0.42
TUBB3-215ENST00000625617 MAGEB6Q8N7X4 407 aa17.65■□□□□ 0.42
TUBB3-215ENST00000625617 FEZ1Q99689 392 aa17.65■□□□□ 0.42
TUBB3-215ENST00000625617 NUDT12Q9BQG2 462 aa17.65■□□□□ 0.42
TUBB3-215ENST00000625617 A0A1W2PPC1 479 aa17.64■□□□□ 0.41
TUBB3-215ENST00000625617 PEX10O60683 326 aa17.64■□□□□ 0.41
TUBB3-215ENST00000625617 GH2P01242 217 aa17.64■□□□□ 0.41
TUBB3-215ENST00000625617 CYP2B6P20813 491 aa17.64■□□□□ 0.41
TUBB3-215ENST00000625617 MAPK4P31152 587 aa17.64■□□□□ 0.41
TUBB3-215ENST00000625617 ERVK-9P63128 1117 aa17.64■□□□□ 0.41
TUBB3-215ENST00000625617 ERVK-24P63145 666 aa17.64■□□□□ 0.41
TUBB3-215ENST00000625617 MAP3K12Q12852 859 aa17.64■□□□□ 0.41
TUBB3-215ENST00000625617 CEP85Q6P2H3 762 aa17.64■□□□□ 0.41
TUBB3-215ENST00000625617 USP17L2Q6R6M4 530 aa17.64■□□□□ 0.41
TUBB3-215ENST00000625617 CCAR1Q8IX12 1150 aaKnown RBP17.64■□□□□ 0.41
TUBB3-215ENST00000625617 PAGR1Q9BTK6 254 aa17.64■□□□□ 0.41
TUBB3-215ENST00000625617 XRCC5P13010 732 aaKnown RBP17.63■□□□□ 0.41
TUBB3-215ENST00000625617 PRKAR2AP13861 404 aaKnown RBP17.63■□□□□ 0.41
TUBB3-215ENST00000625617 ZKSCAN1P17029 563 aaPredicted RBP17.63■□□□□ 0.41
TUBB3-215ENST00000625617 TMED8Q6PL24 325 aaPredicted RBP17.63■□□□□ 0.41
TUBB3-215ENST00000625617 AACSQ86V21 672 aa17.63■□□□□ 0.41
TUBB3-215ENST00000625617 ERC1Q8IUD2 1116 aa17.63■□□□□ 0.41
TUBB3-215ENST00000625617 NBPF3Q9H094 633 aa17.63■□□□□ 0.41
TUBB3-215ENST00000625617 EHD4Q9H223 541 aa17.63■□□□□ 0.41
TUBB3-215ENST00000625617 EMILIN3Q9NT22 766 aa17.63■□□□□ 0.41
TUBB3-215ENST00000625617 SERPINB13Q9UIV8 391 aa17.63■□□□□ 0.41
TUBB3-215ENST00000625617 NDUFB9Q9Y6M9 179 aa17.63■□□□□ 0.41
TUBB3-215ENST00000625617 ZYXQ15942 572 aaKnown RBP17.62■□□□□ 0.41
TUBB3-215ENST00000625617 MAP3K21Q5TCX8 1036 aa17.62■□□□□ 0.41
TUBB3-215ENST00000625617 TRMT44Q8IYL2 757 aaKnown RBP17.62■□□□□ 0.41
TUBB3-215ENST00000625617 C7orf61Q8IZ16 206 aa17.62■□□□□ 0.41
TUBB3-215ENST00000625617 C12orf42Q96LP6 360 aa17.62■□□□□ 0.41
TUBB3-215ENST00000625617 PORCNQ9H237 461 aa17.62■□□□□ 0.41
TUBB3-215ENST00000625617 CWC22Q9HCG8 908 aaKnown RBP17.62■□□□□ 0.41
TUBB3-215ENST00000625617 RBPJLQ9UBG7 517 aa17.62■□□□□ 0.41
TUBB3-215ENST00000625617 EXOC6BQ9Y2D4 811 aa17.62■□□□□ 0.41
TUBB3-215ENST00000625617 RANBP2P49792 3224 aaKnown RBP17.62■□□□□ 0.41
TUBB3-215ENST00000625617 FOCADQ5VW36 1801 aa17.61■□□□□ 0.41
TUBB3-215ENST00000625617 RGS2P41220 211 aa17.61■□□□□ 0.41
TUBB3-215ENST00000625617 RAB3GAP1Q15042 981 aa17.61■□□□□ 0.41
TUBB3-215ENST00000625617 TATDN1Q6P1N9 297 aa17.61■□□□□ 0.41
TUBB3-215ENST00000625617 GPR142Q7Z601 462 aa17.61■□□□□ 0.41
TUBB3-215ENST00000625617 TTC6Q86TZ1 520 aa17.61■□□□□ 0.41
TUBB3-215ENST00000625617 APBA2Q99767 749 aa17.61■□□□□ 0.41
TUBB3-215ENST00000625617 C11orf49Q9H6J7 331 aa17.61■□□□□ 0.41
TUBB3-215ENST00000625617 ANTXR1Q9H6X2 564 aa17.61■□□□□ 0.41
TUBB3-215ENST00000625617 OGDHLQ9ULD0 1010 aa17.61■□□□□ 0.41
TUBB3-215ENST00000625617 USP14P54578 494 aa17.6■□□□□ 0.41
TUBB3-215ENST00000625617 PLEKHH3Q7Z736 793 aa17.6■□□□□ 0.41
TUBB3-215ENST00000625617 STAP2Q9UGK3 403 aa17.6■□□□□ 0.41
TUBB3-215ENST00000625617 CDK5RAP2Q96SN8 1893 aa17.59■□□□□ 0.41
TUBB3-215ENST00000625617 USP17L15C9J2P7 530 aa17.59■□□□□ 0.41
TUBB3-215ENST00000625617 USP17L13C9JLJ4 530 aa17.59■□□□□ 0.41
TUBB3-215ENST00000625617 USP17L11C9JVI0 530 aa17.59■□□□□ 0.41
TUBB3-215ENST00000625617 USP17L18D6R9N7 530 aa17.59■□□□□ 0.41
TUBB3-215ENST00000625617 USP17L22D6RA61 530 aa17.59■□□□□ 0.41
TUBB3-215ENST00000625617 USP17L17D6RBQ6 530 aa17.59■□□□□ 0.41
TUBB3-215ENST00000625617 USP17L19D6RCP7 530 aa17.59■□□□□ 0.41
TUBB3-215ENST00000625617 USP17L20D6RJB6 530 aa17.59■□□□□ 0.41
TUBB3-215ENST00000625617 VCAM1P19320 739 aa17.59■□□□□ 0.41
TUBB3-215ENST00000625617 MNX1P50219 401 aaPredicted RBP17.59■□□□□ 0.41
TUBB3-215ENST00000625617 CCNA1P78396 465 aa17.59■□□□□ 0.41
TUBB3-215ENST00000625617 USP17L24Q0WX57 530 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms