RNA–Protein interactions for RNA: ENST00000624700.3

CDKL5-207, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-207ENST00000624700 ASIC4Q96FT7 647 aa6.67□□□□□ -1.34
CDKL5-207ENST00000624700 EAF1Q96JC9 268 aaPredicted RBP6.67□□□□□ -1.34
CDKL5-207ENST00000624700 GSX1Q9H4S2 264 aaPredicted RBP6.67□□□□□ -1.34
CDKL5-207ENST00000624700 PICK1Q9NRD5 415 aa6.67□□□□□ -1.34
CDKL5-207ENST00000624700 ACTL7BQ9Y614 415 aa6.67□□□□□ -1.34
CDKL5-207ENST00000624700 ARID1BQ8NFD5 2236 aaPredicted RBP6.66□□□□□ -1.34
CDKL5-207ENST00000624700 ASPAP45381 313 aa6.66□□□□□ -1.34
CDKL5-207ENST00000624700 PTPN11Q06124 597 aaPredicted RBP6.66□□□□□ -1.34
CDKL5-207ENST00000624700 RING1Q06587 406 aa6.66□□□□□ -1.34
CDKL5-207ENST00000624700 LRRFIP1Q32MZ4 808 aaKnown RBP6.66□□□□□ -1.34
CDKL5-207ENST00000624700 MPRIPQ6WCQ1 1025 aa6.66□□□□□ -1.34
CDKL5-207ENST00000624700 DYMQ7RTS9 669 aa6.66□□□□□ -1.34
CDKL5-207ENST00000624700 REC114Q7Z4M0 266 aa6.66□□□□□ -1.34
CDKL5-207ENST00000624700 WDR89Q96FK6 387 aaPredicted RBP6.66□□□□□ -1.34
CDKL5-207ENST00000624700 PIDD1Q9HB75 910 aa6.66□□□□□ -1.34
CDKL5-207ENST00000624700 STRIP2Q9ULQ0 834 aa6.66□□□□□ -1.34
CDKL5-207ENST00000624700 PCDHGC5Q9Y5F6 944 aa6.66□□□□□ -1.34
CDKL5-207ENST00000624700 TMPRSS2O15393 492 aa6.65□□□□□ -1.34
CDKL5-207ENST00000624700 ITGB5P18084 799 aa6.65□□□□□ -1.34
CDKL5-207ENST00000624700 RAB6AP20340 208 aa6.65□□□□□ -1.34
CDKL5-207ENST00000624700 INPP5AQ14642 412 aa6.65□□□□□ -1.34
CDKL5-207ENST00000624700 SF3A1Q15459 793 aaKnown RBP6.65□□□□□ -1.34
CDKL5-207ENST00000624700 WIPI1Q5MNZ9 446 aaPredicted RBP6.65□□□□□ -1.34
CDKL5-207ENST00000624700 LRFN4Q6PJG9 635 aa6.65□□□□□ -1.34
CDKL5-207ENST00000624700 CDC37L1Q7L3B6 337 aa6.65□□□□□ -1.34
CDKL5-207ENST00000624700 AGBL5Q8NDL9 886 aa6.65□□□□□ -1.34
CDKL5-207ENST00000624700 FLCNQ8NFG4 579 aa6.65□□□□□ -1.34
CDKL5-207ENST00000624700 ZNF507Q8TCN5 953 aa6.65□□□□□ -1.34
CDKL5-207ENST00000624700 PLPPR2Q96GM1 343 aa6.65□□□□□ -1.34
CDKL5-207ENST00000624700 FANCD2OSQ96PS1 177 aa6.65□□□□□ -1.34
CDKL5-207ENST00000624700 GMLQ99445 158 aa6.65□□□□□ -1.34
CDKL5-207ENST00000624700 WNT10AQ9GZT5 417 aa6.65□□□□□ -1.34
CDKL5-207ENST00000624700 DISC1Q9NRI5 854 aa6.65□□□□□ -1.34
CDKL5-207ENST00000624700 UBP1Q9NZI7 540 aa6.65□□□□□ -1.34
CDKL5-207ENST00000624700 PPP1R9AQ9ULJ8 1098 aa6.65□□□□□ -1.34
CDKL5-207ENST00000624700 PRR36Q9H6K5 1346 aa6.65□□□□□ -1.35
CDKL5-207ENST00000624700 ATE1O95260 518 aa6.64□□□□□ -1.35
CDKL5-207ENST00000624700 JUNBP17275 347 aaPredicted RBP6.64□□□□□ -1.35
CDKL5-207ENST00000624700 MCM4P33991 863 aa6.64□□□□□ -1.35
CDKL5-207ENST00000624700 SOX9P48436 509 aa6.64□□□□□ -1.35
CDKL5-207ENST00000624700 SEZ6Q53EL9 994 aa6.64□□□□□ -1.35
CDKL5-207ENST00000624700 OGFOD2Q6N063 350 aa6.64□□□□□ -1.35
CDKL5-207ENST00000624700 C12orf40Q86WS4 652 aa6.64□□□□□ -1.35
CDKL5-207ENST00000624700 SEMA6CQ9H3T2 930 aa6.64□□□□□ -1.35
CDKL5-207ENST00000624700 ACSS3Q9H6R3 686 aa6.64□□□□□ -1.35
CDKL5-207ENST00000624700 EHMT1Q9H9B1 1298 aa6.64□□□□□ -1.35
CDKL5-207ENST00000624700 LRRC4CQ9HCJ2 640 aa6.64□□□□□ -1.35
CDKL5-207ENST00000624700 SSU72Q9NP77 194 aaKnown RBP6.64□□□□□ -1.35
CDKL5-207ENST00000624700 PAK6Q9NQU5 681 aaPredicted RBP6.64□□□□□ -1.35
CDKL5-207ENST00000624700 ADAM30Q9UKF2 790 aa6.64□□□□□ -1.35
CDKL5-207ENST00000624700 PCOLCE2Q9UKZ9 415 aa6.64□□□□□ -1.35
CDKL5-207ENST00000624700 AP4E1Q9UPM8 1137 aa6.64□□□□□ -1.35
CDKL5-207ENST00000624700 DCDC2CA8MYV0 355 aa6.63□□□□□ -1.35
CDKL5-207ENST00000624700 ATF4P18848 351 aaPredicted RBP6.63□□□□□ -1.35
CDKL5-207ENST00000624700 ZNF765Q7L2R6 523 aa6.63□□□□□ -1.35
CDKL5-207ENST00000624700 POU5F2Q8N7G0 328 aa6.63□□□□□ -1.35
CDKL5-207ENST00000624700 CRBNQ96SW2 442 aa6.63□□□□□ -1.35
CDKL5-207ENST00000624700 TINF2Q9BSI4 451 aa6.63□□□□□ -1.35
CDKL5-207ENST00000624700 BRMS1Q9HCU9 246 aa6.63□□□□□ -1.35
CDKL5-207ENST00000624700 FAM105AQ9NUU6 356 aa6.63□□□□□ -1.35
CDKL5-207ENST00000624700 ZC3H7BQ9UGR2 993 aaKnown RBP6.63□□□□□ -1.35
CDKL5-207ENST00000624700 TLR3O15455 904 aaKnown RBP6.62□□□□□ -1.35
CDKL5-207ENST00000624700 TNNI2P48788 182 aa6.62□□□□□ -1.35
CDKL5-207ENST00000624700 ETF1P62495 437 aaKnown RBP6.62□□□□□ -1.35
CDKL5-207ENST00000624700 TMEM201Q5SNT2 666 aa6.62□□□□□ -1.35
CDKL5-207ENST00000624700 ZBTB37Q5TC79 503 aa6.62□□□□□ -1.35
CDKL5-207ENST00000624700 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.62□□□□□ -1.35
CDKL5-207ENST00000624700 HID1Q8IV36 788 aa6.62□□□□□ -1.35
CDKL5-207ENST00000624700 EFR3BQ9Y2G0 817 aa6.62□□□□□ -1.35
CDKL5-207ENST00000624700 RNGTTO60942 597 aaKnown RBP6.61□□□□□ -1.35
CDKL5-207ENST00000624700 CAP2P40123 477 aa6.61□□□□□ -1.35
CDKL5-207ENST00000624700 CRKP46108 304 aa6.61□□□□□ -1.35
CDKL5-207ENST00000624700 TTLL4Q14679 1199 aa6.61□□□□□ -1.35
CDKL5-207ENST00000624700 PPM1JQ5JR12 505 aa6.61□□□□□ -1.35
CDKL5-207ENST00000624700 SLC6A19Q695T7 634 aa6.61□□□□□ -1.35
CDKL5-207ENST00000624700 SEZ6L2Q6UXD5 910 aa6.61□□□□□ -1.35
CDKL5-207ENST00000624700 SMYD4Q8IYR2 804 aaPredicted RBP6.61□□□□□ -1.35
CDKL5-207ENST00000624700 OR6P1Q8NGX9 317 aa6.61□□□□□ -1.35
CDKL5-207ENST00000624700 CPLX3Q8WVH0 158 aa6.61□□□□□ -1.35
CDKL5-207ENST00000624700 SREK1Q8WXA9 508 aaKnown RBP6.61□□□□□ -1.35
CDKL5-207ENST00000624700 ARMC5Q96C12 935 aa6.61□□□□□ -1.35
CDKL5-207ENST00000624700 C1GALT1Q9NS00 363 aa6.61□□□□□ -1.35
CDKL5-207ENST00000624700 GINM1Q9NU53 330 aa6.61□□□□□ -1.35
CDKL5-207ENST00000624700 PCDHB14Q9Y5E9 798 aa6.61□□□□□ -1.35
CDKL5-207ENST00000624700 PRAMEF27A3QJZ7 478 aa6.6□□□□□ -1.35
CDKL5-207ENST00000624700 PGRP06401 933 aa6.6□□□□□ -1.35
CDKL5-207ENST00000624700 PLCG1P19174 1290 aa6.6□□□□□ -1.35
CDKL5-207ENST00000624700 ATP2B1P20020 1258 aa6.6□□□□□ -1.35
CDKL5-207ENST00000624700 OGFOD3Q6PK18 319 aa6.6□□□□□ -1.35
CDKL5-207ENST00000624700 MCATQ8IVS2 390 aaKnown RBP6.6□□□□□ -1.35
CDKL5-207ENST00000624700 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.6□□□□□ -1.35
CDKL5-207ENST00000624700 FBXO27Q8NI29 283 aa6.6□□□□□ -1.35
CDKL5-207ENST00000624700 DRC1Q96MC2 740 aa6.6□□□□□ -1.35
CDKL5-207ENST00000624700 FERD3LQ96RJ6 166 aa6.6□□□□□ -1.35
CDKL5-207ENST00000624700 SLC5A6Q9Y289 635 aa6.6□□□□□ -1.35
CDKL5-207ENST00000624700 CSADQ9Y600 493 aa6.6□□□□□ -1.35
CDKL5-207ENST00000624700 HTR3BO95264 441 aa6.59□□□□□ -1.35
CDKL5-207ENST00000624700 SSBP05455 408 aaKnown RBP eCLIP6.59□□□□□ -1.35
CDKL5-207ENST00000624700 DNAJA1P31689 397 aaKnown RBP6.59□□□□□ -1.35
CDKL5-207ENST00000624700 GRK4P32298 578 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms