RNA–Protein interactions for RNA: ENST00000624688.2

C3orf56-201, Transcript of chromosome 3 open reading frame 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C3orf56, Length 1,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56-201ENST00000624688 MXD3Q9BW11 206 aa15.36■□□□□ 0.05
C3orf56-201ENST00000624688 PDGFDQ9GZP0 370 aaPredicted RBP15.36■□□□□ 0.05
C3orf56-201ENST00000624688 IL17RBQ9NRM6 502 aa15.36■□□□□ 0.05
C3orf56-201ENST00000624688 POLR3EQ9NVU0 708 aa15.36■□□□□ 0.05
C3orf56-201ENST00000624688 DACT1Q9NYF0 836 aa15.36■□□□□ 0.05
C3orf56-201ENST00000624688 ZNF646O15015 1829 aaPredicted RBP15.36■□□□□ 0.05
C3orf56-201ENST00000624688 FLT1P17948 1338 aa15.36■□□□□ 0.05
C3orf56-201ENST00000624688 NR1I2O75469 434 aa15.35■□□□□ 0.05
C3orf56-201ENST00000624688 DEXIO95424 95 aa15.35■□□□□ 0.05
C3orf56-201ENST00000624688 CALM1P0DP23 149 aa15.35■□□□□ 0.05
C3orf56-201ENST00000624688 CALM2P0DP24 149 aa15.35■□□□□ 0.05
C3orf56-201ENST00000624688 CALM3P0DP25 149 aa15.35■□□□□ 0.05
C3orf56-201ENST00000624688 U2AF2P26368 475 aaKnown RBP eCLIP15.35■□□□□ 0.05
C3orf56-201ENST00000624688 NT5C2P49902 561 aa15.35■□□□□ 0.05
C3orf56-201ENST00000624688 LINC00301Q8NCQ3 95 aa15.35■□□□□ 0.05
C3orf56-201ENST00000624688 SLC44A5Q8NCS7 719 aa15.35■□□□□ 0.05
C3orf56-201ENST00000624688 BICD2Q8TD16 824 aa15.35■□□□□ 0.05
C3orf56-201ENST00000624688 FBXW7Q969H0 707 aa15.35■□□□□ 0.05
C3orf56-201ENST00000624688 EYA3Q99504 573 aa15.35■□□□□ 0.05
C3orf56-201ENST00000624688 TMX4Q9H1E5 349 aaPredicted RBP15.35■□□□□ 0.05
C3orf56-201ENST00000624688 SNED1Q8TER0 1413 aa15.35■□□□□ 0.05
C3orf56-201ENST00000624688 ADAMTSL1Q8N6G6 1762 aa15.35■□□□□ 0.05
C3orf56-201ENST00000624688 MYH1P12882 1939 aa15.35■□□□□ 0.05
C3orf56-201ENST00000624688 PLEKHA8P1O95397 391 aa15.34■□□□□ 0.05
C3orf56-201ENST00000624688 TFAP4Q01664 338 aa15.34■□□□□ 0.05
C3orf56-201ENST00000624688 TRIM29Q14134 588 aa15.34■□□□□ 0.05
C3orf56-201ENST00000624688 AMOTL1Q8IY63 956 aa15.34■□□□□ 0.05
C3orf56-201ENST00000624688 C7orf43Q8WVR3 580 aa15.34■□□□□ 0.05
C3orf56-201ENST00000624688 ANKS1AQ92625 1134 aa15.34■□□□□ 0.05
C3orf56-201ENST00000624688 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.34■□□□□ 0.05
C3orf56-201ENST00000624688 RNF26Q9BY78 433 aaPredicted RBP15.34■□□□□ 0.05
C3orf56-201ENST00000624688 GOLPH3LQ9H4A5 285 aa15.34■□□□□ 0.05
C3orf56-201ENST00000624688 RBM28Q9NW13 759 aaKnown RBP15.34■□□□□ 0.05
C3orf56-201ENST00000624688 MYH6P13533 1939 aa15.34■□□□□ 0.05
C3orf56-201ENST00000624688 F8W031 263 aaPredicted RBP15.34■□□□□ 0.05
C3orf56-201ENST00000624688 YEATS4O95619 227 aa15.34■□□□□ 0.05
C3orf56-201ENST00000624688 MMP1P03956 469 aa15.34■□□□□ 0.05
C3orf56-201ENST00000624688 PKN1Q16512 942 aa15.34■□□□□ 0.05
C3orf56-201ENST00000624688 DEFB132Q7Z7B7 95 aa15.34■□□□□ 0.05
C3orf56-201ENST00000624688 FBXO41Q8TF61 875 aa15.34■□□□□ 0.05
C3orf56-201ENST00000624688 CNKSR1Q969H4 720 aa15.34■□□□□ 0.05
C3orf56-201ENST00000624688 SHISA4Q96DD7 197 aa15.34■□□□□ 0.05
C3orf56-201ENST00000624688 NUP62CLQ9H1M0 184 aa15.34■□□□□ 0.05
C3orf56-201ENST00000624688 KCNQ5Q9NR82 932 aa15.34■□□□□ 0.05
C3orf56-201ENST00000624688 DDX19AQ9NUU7 478 aaKnown RBP15.34■□□□□ 0.05
C3orf56-201ENST00000624688 PCDHA7Q9UN72 937 aa15.34■□□□□ 0.05
C3orf56-201ENST00000624688 PRPF3O43395 683 aaKnown RBP15.33■□□□□ 0.04
C3orf56-201ENST00000624688 RASA1P20936 1047 aa15.33■□□□□ 0.04
C3orf56-201ENST00000624688 ANO1Q5XXA6 986 aa15.33■□□□□ 0.04
C3orf56-201ENST00000624688 C16orf86Q6ZW13 317 aa15.33■□□□□ 0.04
C3orf56-201ENST00000624688 TMTC3Q6ZXV5 915 aa15.33■□□□□ 0.04
C3orf56-201ENST00000624688 DGKHQ86XP1 1220 aa15.33■□□□□ 0.04
C3orf56-201ENST00000624688 CCAR1Q8IX12 1150 aaKnown RBP15.33■□□□□ 0.04
C3orf56-201ENST00000624688 RNF214Q8ND24 703 aa15.33■□□□□ 0.04
C3orf56-201ENST00000624688 CLSTN2Q9H4D0 955 aa15.33■□□□□ 0.04
C3orf56-201ENST00000624688 DBNDD1Q9H9R9 158 aa15.33■□□□□ 0.04
C3orf56-201ENST00000624688 MKNK2Q9HBH9 465 aa15.33■□□□□ 0.04
C3orf56-201ENST00000624688 TCP11L1Q9NUJ3 509 aa15.33■□□□□ 0.04
C3orf56-201ENST00000624688 TAOK2Q9UL54 1235 aa15.33■□□□□ 0.04
C3orf56-201ENST00000624688 TTF2Q9UNY4 1162 aaKnown RBP15.33■□□□□ 0.04
C3orf56-201ENST00000624688 ME1P48163 572 aa15.32■□□□□ 0.04
C3orf56-201ENST00000624688 CDK8P49336 464 aa15.32■□□□□ 0.04
C3orf56-201ENST00000624688 CAMK4Q16566 473 aa15.32■□□□□ 0.04
C3orf56-201ENST00000624688 RBM43Q6ZSC3 357 aaKnown RBP15.32■□□□□ 0.04
C3orf56-201ENST00000624688 PODNQ7Z5L7 613 aa15.32■□□□□ 0.04
C3orf56-201ENST00000624688 ZNF219Q9P2Y4 722 aaPredicted RBP15.32■□□□□ 0.04
C3orf56-201ENST00000624688 KCNJ14Q9UNX9 436 aa15.32■□□□□ 0.04
C3orf56-201ENST00000624688 SCN9AQ15858 1988 aa15.32■□□□□ 0.04
C3orf56-201ENST00000624688 C10orf71Q711Q0 1435 aa15.32■□□□□ 0.04
C3orf56-201ENST00000624688 USP17L3A6NCW0 530 aa15.31■□□□□ 0.04
C3orf56-201ENST00000624688 USP17L4A6NCW7 530 aa15.31■□□□□ 0.04
C3orf56-201ENST00000624688 G3V3G9 751 aa15.31■□□□□ 0.04
C3orf56-201ENST00000624688 BAG6P46379 1132 aa15.31■□□□□ 0.04
C3orf56-201ENST00000624688 SNW1Q13573 536 aaKnown RBP15.31■□□□□ 0.04
C3orf56-201ENST00000624688 STK38Q15208 465 aa15.31■□□□□ 0.04
C3orf56-201ENST00000624688 DCAF8Q5TAQ9 597 aa15.31■□□□□ 0.04
C3orf56-201ENST00000624688 ADALQ6DHV7 355 aa15.31■□□□□ 0.04
C3orf56-201ENST00000624688 USP17L1Q7RTZ2 530 aa15.31■□□□□ 0.04
C3orf56-201ENST00000624688 SRBD1Q8N5C6 995 aaKnown RBP15.31■□□□□ 0.04
C3orf56-201ENST00000624688 ENGASEQ8NFI3 743 aa15.31■□□□□ 0.04
C3orf56-201ENST00000624688 PPP1R9BQ96SB3 815 aa15.31■□□□□ 0.04
C3orf56-201ENST00000624688 MAP3K14Q99558 947 aa15.31■□□□□ 0.04
C3orf56-201ENST00000624688 CNTNAP5Q8WYK1 1306 aa15.31■□□□□ 0.04
C3orf56-201ENST00000624688 BTBD18B2RXH4 712 aa15.31■□□□□ 0.04
C3orf56-201ENST00000624688 SPTLC2O15270 562 aa15.31■□□□□ 0.04
C3orf56-201ENST00000624688 TSPY3P0CV98 308 aa15.31■□□□□ 0.04
C3orf56-201ENST00000624688 TSPY8P0CW00 308 aa15.31■□□□□ 0.04
C3orf56-201ENST00000624688 SCNN1DP51172 638 aa15.31■□□□□ 0.04
C3orf56-201ENST00000624688 PTPAQ15257 358 aa15.31■□□□□ 0.04
C3orf56-201ENST00000624688 MAP3K11Q16584 847 aa15.31■□□□□ 0.04
C3orf56-201ENST00000624688 HHIPL2Q6UWX4 724 aa15.31■□□□□ 0.04
C3orf56-201ENST00000624688 ZNF444Q8N0Y2 327 aaPredicted RBP15.31■□□□□ 0.04
C3orf56-201ENST00000624688 KCNG4Q8TDN1 519 aa15.31■□□□□ 0.04
C3orf56-201ENST00000624688 TNMDQ9H2S6 317 aa15.31■□□□□ 0.04
C3orf56-201ENST00000624688 V9GY48 417 aaPredicted RBP15.31■□□□□ 0.04
C3orf56-201ENST00000624688 A0A1W2PQ27 194 aa15.3■□□□□ 0.04
C3orf56-201ENST00000624688 A0A1W2PQ64 194 aa15.3■□□□□ 0.04
C3orf56-201ENST00000624688 A0A1W2PQD8 194 aa15.3■□□□□ 0.04
C3orf56-201ENST00000624688 ECE2O60344 883 aa15.3■□□□□ 0.04
C3orf56-201ENST00000624688 WDHD1O75717 1129 aaPredicted RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms