RNA–Protein interactions for RNA: ENST00000623321.3

ATRX-211, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 1,860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-211ENST00000623321 GPHNQ9NQX3 736 aaPredicted RBP17.59■□□□□ 0.41
ATRX-211ENST00000623321 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.59■□□□□ 0.41
ATRX-211ENST00000623321 NAV1Q8NEY1 1877 aa17.59■□□□□ 0.41
ATRX-211ENST00000623321 SH2B2O14492 632 aaPredicted RBP17.58■□□□□ 0.41
ATRX-211ENST00000623321 ORC4O43929 436 aa17.58■□□□□ 0.41
ATRX-211ENST00000623321 WDHD1O75717 1129 aaPredicted RBP17.58■□□□□ 0.41
ATRX-211ENST00000623321 NT5C2P49902 561 aa17.58■□□□□ 0.41
ATRX-211ENST00000623321 EVX2Q03828 476 aa17.58■□□□□ 0.41
ATRX-211ENST00000623321 STK3Q13188 491 aa17.58■□□□□ 0.41
ATRX-211ENST00000623321 CIAPIN1Q6FI81 312 aa17.58■□□□□ 0.41
ATRX-211ENST00000623321 AGBL3Q8NEM8 1001 aa17.58■□□□□ 0.41
ATRX-211ENST00000623321 GTF3C6Q969F1 213 aa17.58■□□□□ 0.41
ATRX-211ENST00000623321 NUP62CLQ9H1M0 184 aa17.58■□□□□ 0.41
ATRX-211ENST00000623321 SAP30BPQ9UHR5 308 aaKnown RBP17.58■□□□□ 0.41
ATRX-211ENST00000623321 HDAC9Q9UKV0 1011 aa17.58■□□□□ 0.41
ATRX-211ENST00000623321 ROBO3Q96MS0 1386 aa17.58■□□□□ 0.4
ATRX-211ENST00000623321 PFKFB2O60825 505 aa17.58■□□□□ 0.4
ATRX-211ENST00000623321 DTNBO60941 627 aa17.58■□□□□ 0.4
ATRX-211ENST00000623321 TPM3P06753 285 aa17.58■□□□□ 0.4
ATRX-211ENST00000623321 PLCD1P51178 756 aa17.58■□□□□ 0.4
ATRX-211ENST00000623321 RASSF7Q02833 373 aa17.58■□□□□ 0.4
ATRX-211ENST00000623321 SART3Q15020 963 aaKnown RBP17.58■□□□□ 0.4
ATRX-211ENST00000623321 TNIP1Q15025 636 aa17.58■□□□□ 0.4
ATRX-211ENST00000623321 MAP3K11Q16584 847 aa17.58■□□□□ 0.4
ATRX-211ENST00000623321 ZBTB12Q9Y330 459 aaPredicted RBP17.58■□□□□ 0.4
ATRX-211ENST00000623321 FOCADQ5VW36 1801 aa17.58■□□□□ 0.4
ATRX-211ENST00000623321 ADAMTSL1Q8N6G6 1762 aa17.57■□□□□ 0.4
ATRX-211ENST00000623321 IFIT3O14879 490 aaKnown RBP17.57■□□□□ 0.4
ATRX-211ENST00000623321 PDIA3P30101 505 aaKnown RBP17.57■□□□□ 0.4
ATRX-211ENST00000623321 LIFRP42702 1097 aa17.57■□□□□ 0.4
ATRX-211ENST00000623321 PICALMQ13492 652 aa17.57■□□□□ 0.4
ATRX-211ENST00000623321 CFAP100Q494V2 611 aa17.57■□□□□ 0.4
ATRX-211ENST00000623321 TPRNQ4KMQ1 711 aa17.57■□□□□ 0.4
ATRX-211ENST00000623321 TMEM67Q5HYA8 995 aa17.57■□□□□ 0.4
ATRX-211ENST00000623321 OGFOD1Q8N543 542 aa17.57■□□□□ 0.4
ATRX-211ENST00000623321 CHMP4CQ96CF2 233 aa17.57■□□□□ 0.4
ATRX-211ENST00000623321 MAP7D2Q96T17 732 aa17.57■□□□□ 0.4
ATRX-211ENST00000623321 SYT17Q9BSW7 474 aa17.57■□□□□ 0.4
ATRX-211ENST00000623321 SPTLC3Q9NUV7 552 aa17.57■□□□□ 0.4
ATRX-211ENST00000623321 PCDHAC2Q9Y5I4 1007 aa17.57■□□□□ 0.4
ATRX-211ENST00000623321 RANBP6O60518 1105 aaKnown RBP17.56■□□□□ 0.4
ATRX-211ENST00000623321 PRDM1O75626 825 aa17.56■□□□□ 0.4
ATRX-211ENST00000623321 SLC4A8Q2Y0W8 1093 aa17.56■□□□□ 0.4
ATRX-211ENST00000623321 FERMT3Q86UX7 667 aa17.56■□□□□ 0.4
ATRX-211ENST00000623321 KLF18A0A0U1RQI7 1052 aa17.56■□□□□ 0.4
ATRX-211ENST00000623321 ERICH2A1L162 156 aa17.56■□□□□ 0.4
ATRX-211ENST00000623321 LIG1P18858 919 aa17.56■□□□□ 0.4
ATRX-211ENST00000623321 SCRN1Q12765 414 aa17.56■□□□□ 0.4
ATRX-211ENST00000623321 RBM43Q6ZSC3 357 aaKnown RBP17.56■□□□□ 0.4
ATRX-211ENST00000623321 SGMS1Q86VZ5 419 aa17.56■□□□□ 0.4
ATRX-211ENST00000623321 TMTC2Q8N394 836 aa17.56■□□□□ 0.4
ATRX-211ENST00000623321 FAM200AQ8TCP9 573 aa17.56■□□□□ 0.4
ATRX-211ENST00000623321 UBAC1Q9BSL1 405 aa17.56■□□□□ 0.4
ATRX-211ENST00000623321 IDI2Q9BXS1 227 aa17.56■□□□□ 0.4
ATRX-211ENST00000623321 LY9Q9HBG7 655 aa17.56■□□□□ 0.4
ATRX-211ENST00000623321 ZNF287Q9HBT7 754 aa17.56■□□□□ 0.4
ATRX-211ENST00000623321 DDX4Q9NQI0 724 aaKnown RBP17.56■□□□□ 0.4
ATRX-211ENST00000623321 DDX19AQ9NUU7 478 aaKnown RBP17.56■□□□□ 0.4
ATRX-211ENST00000623321 NAP1L2Q9ULW6 460 aaPredicted RBP17.56■□□□□ 0.4
ATRX-211ENST00000623321 DDX60LQ5H9U9 1706 aaKnown RBP17.56■□□□□ 0.4
ATRX-211ENST00000623321 MYH15Q9Y2K3 1946 aa17.55■□□□□ 0.4
ATRX-211ENST00000623321 NPM3O75607 178 aaKnown RBP17.55■□□□□ 0.4
ATRX-211ENST00000623321 PRELPP51888 382 aa17.55■□□□□ 0.4
ATRX-211ENST00000623321 NOLC1Q14978 699 aaKnown RBP eCLIP17.55■□□□□ 0.4
ATRX-211ENST00000623321 IQCA1Q86XH1 822 aa17.55■□□□□ 0.4
ATRX-211ENST00000623321 LEO1Q8WVC0 666 aaPredicted RBP17.55■□□□□ 0.4
ATRX-211ENST00000623321 DYNLL2Q96FJ2 89 aa17.55■□□□□ 0.4
ATRX-211ENST00000623321 PRMT6Q96LA8 375 aaPredicted RBP17.55■□□□□ 0.4
ATRX-211ENST00000623321 SPATA32Q96LK8 384 aa17.55■□□□□ 0.4
ATRX-211ENST00000623321 ZKSCAN3Q9BRR0 538 aa17.55■□□□□ 0.4
ATRX-211ENST00000623321 OSBPL5Q9H0X9 879 aaPredicted RBP17.55■□□□□ 0.4
ATRX-211ENST00000623321 MYH1P12882 1939 aa17.55■□□□□ 0.4
ATRX-211ENST00000623321 FZD9O00144 591 aa17.54■□□□□ 0.4
ATRX-211ENST00000623321 AP5Z1O43299 807 aa17.54■□□□□ 0.4
ATRX-211ENST00000623321 MMP14P50281 582 aa17.54■□□□□ 0.4
ATRX-211ENST00000623321 WTAPQ15007 396 aa17.54■□□□□ 0.4
ATRX-211ENST00000623321 ARHGAP27Q6ZUM4 889 aa17.54■□□□□ 0.4
ATRX-211ENST00000623321 TTC12Q9H892 705 aaPredicted RBP17.54■□□□□ 0.4
ATRX-211ENST00000623321 MKNK2Q9HBH9 465 aa17.54■□□□□ 0.4
ATRX-211ENST00000623321 ECM29Q5VYK3 1845 aa17.54■□□□□ 0.4
ATRX-211ENST00000623321 EIF6P56537 245 aaKnown RBP17.54■□□□□ 0.4
ATRX-211ENST00000623321 TYRO3Q06418 890 aa17.54■□□□□ 0.4
ATRX-211ENST00000623321 NFIAQ12857 509 aa17.54■□□□□ 0.4
ATRX-211ENST00000623321 RESTQ13127 1097 aa17.54■□□□□ 0.4
ATRX-211ENST00000623321 DLGAP5Q15398 846 aa17.54■□□□□ 0.4
ATRX-211ENST00000623321 FAM173BQ6P4H8 233 aa17.54■□□□□ 0.4
ATRX-211ENST00000623321 NFXL1Q6ZNB6 911 aa17.54■□□□□ 0.4
ATRX-211ENST00000623321 C16orf86Q6ZW13 317 aa17.54■□□□□ 0.4
ATRX-211ENST00000623321 PRIMPOLQ96LW4 560 aa17.54■□□□□ 0.4
ATRX-211ENST00000623321 ZNF830Q96NB3 372 aaPredicted RBP17.54■□□□□ 0.4
ATRX-211ENST00000623321 ZSCAN10Q96SZ4 725 aaPredicted RBP17.54■□□□□ 0.4
ATRX-211ENST00000623321 LLPHQ9BRT6 129 aaKnown RBP17.54■□□□□ 0.4
ATRX-211ENST00000623321 CLSTN2Q9H4D0 955 aa17.54■□□□□ 0.4
ATRX-211ENST00000623321 MRVI1Q9Y6F6 885 aa17.54■□□□□ 0.4
ATRX-211ENST00000623321 CCT2P78371 535 aaKnown RBP17.53■□□□□ 0.4
ATRX-211ENST00000623321 ZNF444Q8N0Y2 327 aaPredicted RBP17.53■□□□□ 0.4
ATRX-211ENST00000623321 TDRD3Q9H7E2 651 aaKnown RBP17.53■□□□□ 0.4
ATRX-211ENST00000623321 SENP2Q9HC62 589 aa17.53■□□□□ 0.4
ATRX-211ENST00000623321 TNKSO95271 1327 aa17.53■□□□□ 0.4
ATRX-211ENST00000623321 SPDYE2BA6NHP3 402 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms