RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 SASH1O94885 1247 aa18.1■□□□□ 0.49
GABRB3-215ENST00000622697 ARID4AP29374 1257 aaPredicted RBP18.1■□□□□ 0.49
GABRB3-215ENST00000622697 C11orf57Q6ZUT1 292 aaPredicted RBP18.1■□□□□ 0.49
GABRB3-215ENST00000622697 CCDC65Q8IXS2 484 aa18.1■□□□□ 0.49
GABRB3-215ENST00000622697 CCDC155Q8N6L0 562 aa18.1■□□□□ 0.49
GABRB3-215ENST00000622697 FERMT2Q96AC1 680 aa18.1■□□□□ 0.49
GABRB3-215ENST00000622697 PLEKHA4Q9H4M7 779 aa18.1■□□□□ 0.49
GABRB3-215ENST00000622697 SLFNL1Q499Z3 407 aa18.1■□□□□ 0.49
GABRB3-215ENST00000622697 ZMYM6O95789 1325 aa18.1■□□□□ 0.49
GABRB3-215ENST00000622697 CNNM4Q6P4Q7 775 aa18.1■□□□□ 0.49
GABRB3-215ENST00000622697 MICALL1Q8N3F8 863 aa18.1■□□□□ 0.49
GABRB3-215ENST00000622697 GPATCH11Q8N954 259 aa18.1■□□□□ 0.49
GABRB3-215ENST00000622697 KRBA2Q6ZNG9 492 aa18.1■□□□□ 0.49
GABRB3-215ENST00000622697 C10orf67Q8IYJ2 551 aa18.1■□□□□ 0.49
GABRB3-215ENST00000622697 NSUN7Q8NE18 718 aaKnown RBP18.1■□□□□ 0.49
GABRB3-215ENST00000622697 SELENOSQ9BQE4 189 aa18.1■□□□□ 0.49
GABRB3-215ENST00000622697 PTCH1Q13635 1447 aa18.1■□□□□ 0.49
GABRB3-215ENST00000622697 FANCBQ8NB91 859 aa18.1■□□□□ 0.49
GABRB3-215ENST00000622697 EEF2KMTQ96G04 330 aa18.09■□□□□ 0.49
GABRB3-215ENST00000622697 LRWD1Q9UFC0 647 aa18.09■□□□□ 0.49
GABRB3-215ENST00000622697 CMA1P23946 247 aa18.09■□□□□ 0.49
GABRB3-215ENST00000622697 EFCAB6Q5THR3 1501 aa18.09■□□□□ 0.49
GABRB3-215ENST00000622697 MRPL12P52815 198 aaKnown RBP18.09■□□□□ 0.49
GABRB3-215ENST00000622697 ZMYM1Q5SVZ6 1142 aa18.09■□□□□ 0.49
GABRB3-215ENST00000622697 NELFCDQ8IXH7 590 aa18.09■□□□□ 0.49
GABRB3-215ENST00000622697 FBXO18Q8NFZ0 1043 aa18.09■□□□□ 0.49
GABRB3-215ENST00000622697 SNX29Q8TEQ0 813 aa18.09■□□□□ 0.49
GABRB3-215ENST00000622697 LMBR1Q8WVP7 490 aa18.09■□□□□ 0.49
GABRB3-215ENST00000622697 MAST3O60307 1309 aa18.09■□□□□ 0.49
GABRB3-215ENST00000622697 TNKSO95271 1327 aa18.09■□□□□ 0.49
GABRB3-215ENST00000622697 ARHGEF25Q86VW2 580 aa18.09■□□□□ 0.49
GABRB3-215ENST00000622697 CCDC25Q86WR0 208 aa18.09■□□□□ 0.49
GABRB3-215ENST00000622697 ASAP1Q9ULH1 1129 aa18.09■□□□□ 0.49
GABRB3-215ENST00000622697 NONOQ15233 471 aaKnown RBP eCLIP18.08■□□□□ 0.49
GABRB3-215ENST00000622697 FAM98CQ17RN3 349 aaKnown RBP18.08■□□□□ 0.49
GABRB3-215ENST00000622697 UTP14CQ5TAP6 766 aaKnown RBP18.08■□□□□ 0.49
GABRB3-215ENST00000622697 EEF2P13639 858 aaKnown RBP18.08■□□□□ 0.49
GABRB3-215ENST00000622697 TRIM14Q14142 442 aa18.08■□□□□ 0.49
GABRB3-215ENST00000622697 A0A1W2PRG0 241 aa18.08■□□□□ 0.48
GABRB3-215ENST00000622697 MYCNP04198 464 aaPredicted RBP18.08■□□□□ 0.48
GABRB3-215ENST00000622697 HMGB2P26583 209 aaKnown RBP18.08■□□□□ 0.48
GABRB3-215ENST00000622697 CABP7Q86V35 215 aa18.08■□□□□ 0.48
GABRB3-215ENST00000622697 TMTC1Q8IUR5 882 aa18.08■□□□□ 0.48
GABRB3-215ENST00000622697 TSGA10Q9BZW7 698 aa18.08■□□□□ 0.48
GABRB3-215ENST00000622697 ZSCAN10Q96SZ4 725 aaPredicted RBP18.08■□□□□ 0.48
GABRB3-215ENST00000622697 FAM207AQ9NSI2 230 aaPredicted RBP18.08■□□□□ 0.48
GABRB3-215ENST00000622697 CDC42BPAQ5VT25 1732 aa18.07■□□□□ 0.48
GABRB3-215ENST00000622697 DPCR1Q3MIW9 517 aa18.07■□□□□ 0.48
GABRB3-215ENST00000622697 FAM212AQ96EL1 285 aa18.07■□□□□ 0.48
GABRB3-215ENST00000622697 BIN2Q9UBW5 565 aaPredicted RBP18.07■□□□□ 0.48
GABRB3-215ENST00000622697 CLTCL1P53675 1640 aa18.07■□□□□ 0.48
GABRB3-215ENST00000622697 CFAP58Q5T655 872 aa18.07■□□□□ 0.48
GABRB3-215ENST00000622697 MAEAQ7L5Y9 396 aa18.07■□□□□ 0.48
GABRB3-215ENST00000622697 FAM76AQ8TAV0 307 aa18.07■□□□□ 0.48
GABRB3-215ENST00000622697 ZYXQ15942 572 aaKnown RBP18.07■□□□□ 0.48
GABRB3-215ENST00000622697 GPKOWQ92917 476 aaPredicted RBP eCLIP18.07■□□□□ 0.48
GABRB3-215ENST00000622697 TCHPQ9BT92 498 aa18.07■□□□□ 0.48
GABRB3-215ENST00000622697 RASAL2Q9UJF2 1139 aa18.07■□□□□ 0.48
GABRB3-215ENST00000622697 PCCAP05165 728 aaPredicted RBP18.07■□□□□ 0.48
GABRB3-215ENST00000622697 CCDC50Q8IVM0 306 aa18.07■□□□□ 0.48
GABRB3-215ENST00000622697 SLAIN2Q9P270 581 aa18.07■□□□□ 0.48
GABRB3-215ENST00000622697 UBLCP1Q8WVY7 318 aaPredicted RBP18.06■□□□□ 0.48
GABRB3-215ENST00000622697 SYNCQ9H7C4 482 aa18.06■□□□□ 0.48
GABRB3-215ENST00000622697 CARMIL3Q8ND23 1372 aa18.06■□□□□ 0.48
GABRB3-215ENST00000622697 GOLGA8HP0CJ92 632 aa18.06■□□□□ 0.48
GABRB3-215ENST00000622697 PTPN12Q05209 780 aaKnown RBP18.06■□□□□ 0.48
GABRB3-215ENST00000622697 TCP10Q12799 353 aa18.06■□□□□ 0.48
GABRB3-215ENST00000622697 POLA2Q14181 598 aa18.06■□□□□ 0.48
GABRB3-215ENST00000622697 RBM17Q96I25 401 aaKnown RBP18.06■□□□□ 0.48
GABRB3-215ENST00000622697 HERC4Q5GLZ8 1057 aaPredicted RBP18.06■□□□□ 0.48
GABRB3-215ENST00000622697 NCAPH2Q6IBW4 605 aa18.06■□□□□ 0.48
GABRB3-215ENST00000622697 SECISBP2LQ93073 1101 aaKnown RBP18.06■□□□□ 0.48
GABRB3-215ENST00000622697 GGA1Q9UJY5 639 aa18.06■□□□□ 0.48
GABRB3-215ENST00000622697 CDK12Q9NYV4 1490 aaPredicted RBP18.06■□□□□ 0.48
GABRB3-215ENST00000622697 EBAG9O00559 213 aa18.06■□□□□ 0.48
GABRB3-215ENST00000622697 TOM1O60784 492 aa18.06■□□□□ 0.48
GABRB3-215ENST00000622697 TUBB4BP68371 445 aa18.06■□□□□ 0.48
GABRB3-215ENST00000622697 MRFAP1L1Q96HT8 127 aa18.06■□□□□ 0.48
GABRB3-215ENST00000622697 PLVAPQ9BX97 442 aa18.06■□□□□ 0.48
GABRB3-215ENST00000622697 HDAC9Q9UKV0 1011 aa18.06■□□□□ 0.48
GABRB3-215ENST00000622697 GSTA5Q7RTV2 222 aa18.06■□□□□ 0.48
GABRB3-215ENST00000622697 BBXQ8WY36 941 aaPredicted RBP18.06■□□□□ 0.48
GABRB3-215ENST00000622697 HPDP32754 393 aaPredicted RBP18.05■□□□□ 0.48
GABRB3-215ENST00000622697 OSBP2Q969R2 916 aa18.05■□□□□ 0.48
GABRB3-215ENST00000622697 GPHNQ9NQX3 736 aaPredicted RBP18.05■□□□□ 0.48
GABRB3-215ENST00000622697 ZCCHC11Q5TAX3 1644 aaKnown RBP18.05■□□□□ 0.48
GABRB3-215ENST00000622697 USH1GQ495M9 461 aa18.05■□□□□ 0.48
GABRB3-215ENST00000622697 GRIPAP1Q4V328 841 aa18.05■□□□□ 0.48
GABRB3-215ENST00000622697 DPH6Q7L8W6 267 aa18.05■□□□□ 0.48
GABRB3-215ENST00000622697 WDR66Q8TBY9 1149 aa18.05■□□□□ 0.48
GABRB3-215ENST00000622697 PUS7LQ9H0K6 701 aaKnown RBP18.05■□□□□ 0.48
GABRB3-215ENST00000622697 NECTIN1Q15223 517 aa18.05■□□□□ 0.48
GABRB3-215ENST00000622697 CALCRLQ16602 461 aa18.05■□□□□ 0.48
GABRB3-215ENST00000622697 TYW1BQ6NUM6 668 aa18.05■□□□□ 0.48
GABRB3-215ENST00000622697 C8orf74Q6P047 294 aa18.05■□□□□ 0.48
GABRB3-215ENST00000622697 PCDHA5Q9Y5H7 936 aa18.05■□□□□ 0.48
GABRB3-215ENST00000622697 SHROOM2Q13796 1616 aa18.05■□□□□ 0.48
GABRB3-215ENST00000622697 TNNC1P63316 161 aa18.05■□□□□ 0.48
GABRB3-215ENST00000622697 CACTINQ8WUQ7 758 aaKnown RBP18.05■□□□□ 0.48
GABRB3-215ENST00000622697 NLRC4Q9NPP4 1024 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms