RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 ADD2P35612 726 aa10.39□□□□□ -0.75
HDAC9-229ENST00000622668 NLRX1Q86UT6 975 aa10.39□□□□□ -0.75
HDAC9-229ENST00000622668 AGBL3Q8NEM8 1001 aa10.39□□□□□ -0.75
HDAC9-229ENST00000622668 POLLQ9UGP5 575 aa10.39□□□□□ -0.75
HDAC9-229ENST00000622668 KDM6AO15550 1401 aaPredicted RBP10.39□□□□□ -0.75
HDAC9-229ENST00000622668 M0QZ92 97 aa10.38□□□□□ -0.75
HDAC9-229ENST00000622668 SGSM2O43147 1006 aa10.38□□□□□ -0.75
HDAC9-229ENST00000622668 SLC16A2P36021 539 aa10.38□□□□□ -0.75
HDAC9-229ENST00000622668 HMGCS2P54868 508 aa10.38□□□□□ -0.75
HDAC9-229ENST00000622668 PDIA6Q15084 440 aa10.38□□□□□ -0.75
HDAC9-229ENST00000622668 SPOUT1Q5T280 376 aaKnown RBP10.38□□□□□ -0.75
HDAC9-229ENST00000622668 KLHL10Q6JEL2 608 aa10.38□□□□□ -0.75
HDAC9-229ENST00000622668 NAT10Q9H0A0 1025 aaKnown RBP10.38□□□□□ -0.75
HDAC9-229ENST00000622668 MRPL11Q9Y3B7 192 aaKnown RBP10.38□□□□□ -0.75
HDAC9-229ENST00000622668 CCL15-CCL14A0A0B4J2E2 113 aa10.38□□□□□ -0.75
HDAC9-229ENST00000622668 CCL15Q16663 113 aa10.38□□□□□ -0.75
HDAC9-229ENST00000622668 SLC27A2O14975 620 aa10.38□□□□□ -0.75
HDAC9-229ENST00000622668 TMEM39BQ9GZU3 492 aa10.38□□□□□ -0.75
HDAC9-229ENST00000622668 ZNF70Q9UC06 446 aaPredicted RBP10.38□□□□□ -0.75
HDAC9-229ENST00000622668 RIPOR2Q9Y4F9 1068 aa10.38□□□□□ -0.75
HDAC9-229ENST00000622668 SEPT2Q15019 361 aa10.38□□□□□ -0.75
HDAC9-229ENST00000622668 KRT79Q5XKE5 535 aa10.38□□□□□ -0.75
HDAC9-229ENST00000622668 RNF169Q8NCN4 708 aa10.38□□□□□ -0.75
HDAC9-229ENST00000622668 PUS7LQ9H0K6 701 aaKnown RBP10.38□□□□□ -0.75
HDAC9-229ENST00000622668 NCOA5Q9HCD5 579 aaKnown RBP10.38□□□□□ -0.75
HDAC9-229ENST00000622668 PCDHA1Q9Y5I3 950 aa10.38□□□□□ -0.75
HDAC9-229ENST00000622668 MYO5BQ9ULV0 1848 aa10.37□□□□□ -0.75
HDAC9-229ENST00000622668 MCM7P33993 719 aa10.37□□□□□ -0.75
HDAC9-229ENST00000622668 Q3C1V9 767 aa10.37□□□□□ -0.75
HDAC9-229ENST00000622668 TMEM179Q6ZVK1 233 aa10.37□□□□□ -0.75
HDAC9-229ENST00000622668 ANKRD13AQ8IZ07 590 aa10.37□□□□□ -0.75
HDAC9-229ENST00000622668 CMTR1Q8N1G2 835 aaKnown RBP10.37□□□□□ -0.75
HDAC9-229ENST00000622668 FAM212AQ96EL1 285 aa10.37□□□□□ -0.75
HDAC9-229ENST00000622668 ROBO1Q9Y6N7 1651 aa10.37□□□□□ -0.75
HDAC9-229ENST00000622668 PXDNQ92626 1479 aa10.37□□□□□ -0.75
HDAC9-229ENST00000622668 CYP2E1P05181 493 aaPredicted RBP10.37□□□□□ -0.75
HDAC9-229ENST00000622668 ARID4AP29374 1257 aaPredicted RBP10.37□□□□□ -0.75
HDAC9-229ENST00000622668 CDK8P49336 464 aa10.37□□□□□ -0.75
HDAC9-229ENST00000622668 ADCY7P51828 1080 aa10.37□□□□□ -0.75
HDAC9-229ENST00000622668 SKOR2Q2VWA4 1001 aaPredicted RBP10.37□□□□□ -0.75
HDAC9-229ENST00000622668 FASTKD5Q7L8L6 764 aaKnown RBP10.37□□□□□ -0.75
HDAC9-229ENST00000622668 ZNF654Q8IZM8 581 aa10.37□□□□□ -0.75
HDAC9-229ENST00000622668 SLC44A5Q8NCS7 719 aa10.37□□□□□ -0.75
HDAC9-229ENST00000622668 SMC1BQ8NDV3 1235 aa10.37□□□□□ -0.75
HDAC9-229ENST00000622668 ZSCAN10Q96SZ4 725 aaPredicted RBP10.37□□□□□ -0.75
HDAC9-229ENST00000622668 DAGLAQ9Y4D2 1042 aa10.37□□□□□ -0.75
HDAC9-229ENST00000622668 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.37□□□□□ -0.75
HDAC9-229ENST00000622668 MROH7-TTC4A0A0A0MT08 1334 aa10.37□□□□□ -0.75
HDAC9-229ENST00000622668 GLT8D2Q9H1C3 349 aa10.37□□□□□ -0.75
HDAC9-229ENST00000622668 ADD3Q9UEY8 706 aaKnown RBP10.37□□□□□ -0.75
HDAC9-229ENST00000622668 MRVI1Q9Y6F6 885 aa10.37□□□□□ -0.75
HDAC9-229ENST00000622668 CYP2D6P10635 497 aa10.36□□□□□ -0.75
HDAC9-229ENST00000622668 HARSP12081 509 aaKnown RBP10.36□□□□□ -0.75
HDAC9-229ENST00000622668 FILIP1LQ4L180 1135 aa10.36□□□□□ -0.75
HDAC9-229ENST00000622668 TCERG1LQ5VWI1 586 aa10.36□□□□□ -0.75
HDAC9-229ENST00000622668 DSCC1Q9BVC3 393 aa10.36□□□□□ -0.75
HDAC9-229ENST00000622668 ZFYVE28Q9HCC9 887 aa10.36□□□□□ -0.75
HDAC9-229ENST00000622668 TSHZ2Q9NRE2 1034 aa10.36□□□□□ -0.75
HDAC9-229ENST00000622668 ITSN1Q15811 1721 aa10.36□□□□□ -0.75
HDAC9-229ENST00000622668 KIF1AQ12756 1690 aa10.36□□□□□ -0.75
HDAC9-229ENST00000622668 E7EWF7 191 aa10.36□□□□□ -0.75
HDAC9-229ENST00000622668 PDIA4P13667 645 aaKnown RBP10.36□□□□□ -0.75
HDAC9-229ENST00000622668 KRT2P35908 639 aa10.36□□□□□ -0.75
HDAC9-229ENST00000622668 STAT2P52630 851 aa10.36□□□□□ -0.75
HDAC9-229ENST00000622668 SLC10A5Q5PT55 438 aa10.36□□□□□ -0.75
HDAC9-229ENST00000622668 UTP14CQ5TAP6 766 aaKnown RBP10.36□□□□□ -0.75
HDAC9-229ENST00000622668 STXBP4Q6ZWJ1 553 aa10.36□□□□□ -0.75
HDAC9-229ENST00000622668 MCF2L2Q86YR7 1114 aa10.36□□□□□ -0.75
HDAC9-229ENST00000622668 PHKBQ93100 1093 aa10.36□□□□□ -0.75
HDAC9-229ENST00000622668 TRPC6Q9Y210 931 aa10.36□□□□□ -0.75
HDAC9-229ENST00000622668 AOX1Q06278 1338 aa10.36□□□□□ -0.75
HDAC9-229ENST00000622668 GCOM1H8Y6P7 765 aaPredicted RBP10.36□□□□□ -0.75
HDAC9-229ENST00000622668 SMC2O95347 1197 aa10.36□□□□□ -0.75
HDAC9-229ENST00000622668 POLR2MP0CAP2 368 aa10.36□□□□□ -0.75
HDAC9-229ENST00000622668 SNAPC2Q13487 334 aa10.36□□□□□ -0.75
HDAC9-229ENST00000622668 GPC2Q8N158 579 aa10.36□□□□□ -0.75
HDAC9-229ENST00000622668 OSBP2Q969R2 916 aa10.36□□□□□ -0.75
HDAC9-229ENST00000622668 SEPT11Q9NVA2 429 aaKnown RBP10.36□□□□□ -0.75
HDAC9-229ENST00000622668 UBXN2AP68543 259 aa10.36□□□□□ -0.75
HDAC9-229ENST00000622668 SREBF2Q12772 1141 aa10.36□□□□□ -0.75
HDAC9-229ENST00000622668 CCDC84Q86UT8 332 aaPredicted RBP10.36□□□□□ -0.75
HDAC9-229ENST00000622668 PLA2G12BQ9BX93 195 aa10.36□□□□□ -0.75
HDAC9-229ENST00000622668 TNMDQ9H2S6 317 aa10.36□□□□□ -0.75
HDAC9-229ENST00000622668 HOXC10Q9NYD6 342 aa10.36□□□□□ -0.75
HDAC9-229ENST00000622668 KLRK1P26718 216 aa10.35□□□□□ -0.75
HDAC9-229ENST00000622668 AK2P54819 239 aa10.35□□□□□ -0.75
HDAC9-229ENST00000622668 AMPD3Q01432 767 aa10.35□□□□□ -0.75
HDAC9-229ENST00000622668 NBPF9Q3BBW0 867 aa10.35□□□□□ -0.75
HDAC9-229ENST00000622668 GPATCH4Q5T3I0 446 aaKnown RBP10.35□□□□□ -0.75
HDAC9-229ENST00000622668 RNF214Q8ND24 703 aa10.35□□□□□ -0.75
HDAC9-229ENST00000622668 LZTS2Q9BRK4 669 aa10.35□□□□□ -0.75
HDAC9-229ENST00000622668 AMNQ9BXJ7 453 aa10.35□□□□□ -0.75
HDAC9-229ENST00000622668 DNAI2Q9GZS0 605 aa10.35□□□□□ -0.75
HDAC9-229ENST00000622668 PNMA2Q9UL42 364 aa10.35□□□□□ -0.75
HDAC9-229ENST00000622668 MED1Q15648 1581 aaPredicted RBP10.35□□□□□ -0.75
HDAC9-229ENST00000622668 DTNBO60941 627 aa10.35□□□□□ -0.75
HDAC9-229ENST00000622668 CSPG5O95196 566 aa10.35□□□□□ -0.75
HDAC9-229ENST00000622668 SEPT14Q6ZU15 432 aa10.35□□□□□ -0.75
HDAC9-229ENST00000622668 C3orf67Q6ZVT6 689 aa10.35□□□□□ -0.75
HDAC9-229ENST00000622668 ILDR2Q71H61 639 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms