RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 GPRC5DQ9NZD1 345 aa16.68■□□□□ 0.26
CLTCL1-212ENST00000622493 BRPF3Q9ULD4 1205 aa16.68■□□□□ 0.26
CLTCL1-212ENST00000622493 CLRN2A0PK11 232 aa16.67■□□□□ 0.26
CLTCL1-212ENST00000622493 DDTLA6NHG4 134 aaPredicted RBP16.67■□□□□ 0.26
CLTCL1-212ENST00000622493 DHX16O60231 1041 aaKnown RBP16.67■□□□□ 0.26
CLTCL1-212ENST00000622493 TNNI2P48788 182 aa16.67■□□□□ 0.26
CLTCL1-212ENST00000622493 ST3GAL1Q11201 340 aa16.67■□□□□ 0.26
CLTCL1-212ENST00000622493 SCRN1Q12765 414 aa16.67■□□□□ 0.26
CLTCL1-212ENST00000622493 STK3Q13188 491 aa16.67■□□□□ 0.26
CLTCL1-212ENST00000622493 TNFAIP1Q13829 316 aa16.67■□□□□ 0.26
CLTCL1-212ENST00000622493 NBR1Q14596 966 aa16.67■□□□□ 0.26
CLTCL1-212ENST00000622493 NBPF9Q3BBW0 867 aa16.67■□□□□ 0.26
CLTCL1-212ENST00000622493 APOA5Q6Q788 366 aa16.67■□□□□ 0.26
CLTCL1-212ENST00000622493 SYNE3Q6ZMZ3 975 aa16.67■□□□□ 0.26
CLTCL1-212ENST00000622493 METTL16Q86W50 562 aaKnown RBP16.67■□□□□ 0.26
CLTCL1-212ENST00000622493 DGKHQ86XP1 1220 aa16.67■□□□□ 0.26
CLTCL1-212ENST00000622493 SLC44A5Q8NCS7 719 aa16.67■□□□□ 0.26
CLTCL1-212ENST00000622493 LLPHQ9BRT6 129 aaKnown RBP16.67■□□□□ 0.26
CLTCL1-212ENST00000622493 SLC12A7Q9Y666 1083 aa16.67■□□□□ 0.26
CLTCL1-212ENST00000622493 UTRNP46939 3433 aa16.67■□□□□ 0.26
CLTCL1-212ENST00000622493 SRCAPQ6ZRS2 3230 aa16.67■□□□□ 0.26
CLTCL1-212ENST00000622493 TCP10L2B9ZVM9 353 aa16.67■□□□□ 0.26
CLTCL1-212ENST00000622493 FAM47AQ5JRC9 791 aa16.67■□□□□ 0.26
CLTCL1-212ENST00000622493 IFIT1BQ5T764 474 aaKnown RBP16.67■□□□□ 0.26
CLTCL1-212ENST00000622493 SH3BP5LQ7L8J4 393 aa16.67■□□□□ 0.26
CLTCL1-212ENST00000622493 CRACR2BQ8N4Y2 399 aaPredicted RBP16.67■□□□□ 0.26
CLTCL1-212ENST00000622493 ENAHQ8N8S7 591 aaPredicted RBP16.67■□□□□ 0.26
CLTCL1-212ENST00000622493 NEDD1Q8NHV4 660 aa16.67■□□□□ 0.26
CLTCL1-212ENST00000622493 NAP1L2Q9ULW6 460 aaPredicted RBP16.67■□□□□ 0.26
CLTCL1-212ENST00000622493 SMC3Q9UQE7 1217 aa16.67■□□□□ 0.26
CLTCL1-212ENST00000622493 SHTN1A0MZ66 631 aa16.66■□□□□ 0.26
CLTCL1-212ENST00000622493 GOLGA8BA8MQT2 603 aa16.66■□□□□ 0.26
CLTCL1-212ENST00000622493 ZBTB43O43298 467 aa16.66■□□□□ 0.26
CLTCL1-212ENST00000622493 PDIA4P13667 645 aaKnown RBP16.66■□□□□ 0.26
CLTCL1-212ENST00000622493 PPP2R5BQ15173 497 aa16.66■□□□□ 0.26
CLTCL1-212ENST00000622493 KIF4BQ2VIQ3 1234 aa16.66■□□□□ 0.26
CLTCL1-212ENST00000622493 RBM26Q5T8P6 1007 aaKnown RBP16.66■□□□□ 0.26
CLTCL1-212ENST00000622493 DPY19L2Q6NUT2 758 aa16.66■□□□□ 0.26
CLTCL1-212ENST00000622493 ANKS1AQ92625 1134 aa16.66■□□□□ 0.26
CLTCL1-212ENST00000622493 CCDC17Q96LX7 622 aa16.66■□□□□ 0.26
CLTCL1-212ENST00000622493 VEZTQ9HBM0 779 aa16.66■□□□□ 0.26
CLTCL1-212ENST00000622493 HERC5Q9UII4 1024 aaKnown RBP16.66■□□□□ 0.26
CLTCL1-212ENST00000622493 PLIN4Q96Q06 1357 aa16.65■□□□□ 0.26
CLTCL1-212ENST00000622493 NUCB2P80303 420 aa16.65■□□□□ 0.26
CLTCL1-212ENST00000622493 SAMD7Q7Z3H4 446 aa16.65■□□□□ 0.26
CLTCL1-212ENST00000622493 CSRNP1Q96S65 589 aa16.65■□□□□ 0.26
CLTCL1-212ENST00000622493 TRIM34Q9BYJ4 488 aa16.65■□□□□ 0.26
CLTCL1-212ENST00000622493 SENP2Q9HC62 589 aa16.65■□□□□ 0.26
CLTCL1-212ENST00000622493 HPS5Q9UPZ3 1129 aa16.65■□□□□ 0.26
CLTCL1-212ENST00000622493 CNTNAP1P78357 1384 aa16.65■□□□□ 0.26
CLTCL1-212ENST00000622493 NID2Q14112 1375 aa16.65■□□□□ 0.26
CLTCL1-212ENST00000622493 SHMT1P34896 483 aa16.65■□□□□ 0.26
CLTCL1-212ENST00000622493 METAP2P50579 478 aaKnown RBP eCLIP16.65■□□□□ 0.26
CLTCL1-212ENST00000622493 IL17RBQ9NRM6 502 aa16.65■□□□□ 0.26
CLTCL1-212ENST00000622493 MYH8P13535 1937 aa16.64■□□□□ 0.26
CLTCL1-212ENST00000622493 DDNO94850 711 aaPredicted RBP16.64■□□□□ 0.25
CLTCL1-212ENST00000622493 EGFRP00533 1210 aa16.64■□□□□ 0.25
CLTCL1-212ENST00000622493 CALM1P0DP23 149 aa16.64■□□□□ 0.25
CLTCL1-212ENST00000622493 CALM2P0DP24 149 aa16.64■□□□□ 0.25
CLTCL1-212ENST00000622493 CALM3P0DP25 149 aa16.64■□□□□ 0.25
CLTCL1-212ENST00000622493 LMOD1P29536 600 aaPredicted RBP16.64■□□□□ 0.25
CLTCL1-212ENST00000622493 CCT2P78371 535 aaKnown RBP16.64■□□□□ 0.25
CLTCL1-212ENST00000622493 HMGN5P82970 282 aaKnown RBP16.64■□□□□ 0.25
CLTCL1-212ENST00000622493 TBC1D10BQ4KMP7 808 aaPredicted RBP16.64■□□□□ 0.25
CLTCL1-212ENST00000622493 PPP4R3BQ5MIZ7 849 aa16.64■□□□□ 0.25
CLTCL1-212ENST00000622493 TATDN1Q6P1N9 297 aa16.64■□□□□ 0.25
CLTCL1-212ENST00000622493 CATIPQ7Z7H3 387 aa16.64■□□□□ 0.25
CLTCL1-212ENST00000622493 SIPA1L1O43166 1804 aa16.64■□□□□ 0.25
CLTCL1-212ENST00000622493 CCDC196A0A1B0GTZ2 297 aa16.63■□□□□ 0.25
CLTCL1-212ENST00000622493 TBC1D12O60347 775 aa16.63■□□□□ 0.25
CLTCL1-212ENST00000622493 GJB2P29033 226 aa16.63■□□□□ 0.25
CLTCL1-212ENST00000622493 NOVP48745 357 aa16.63■□□□□ 0.25
CLTCL1-212ENST00000622493 RCSD1Q6JBY9 416 aa16.63■□□□□ 0.25
CLTCL1-212ENST00000622493 MICU3Q86XE3 530 aa16.63■□□□□ 0.25
CLTCL1-212ENST00000622493 ZNF654Q8IZM8 581 aa16.63■□□□□ 0.25
CLTCL1-212ENST00000622493 SMARCC2Q8TAQ2 1214 aa16.63■□□□□ 0.25
CLTCL1-212ENST00000622493 DNAJC18Q9H819 358 aa16.63■□□□□ 0.25
CLTCL1-212ENST00000622493 CPLX1O14810 134 aa16.62■□□□□ 0.25
CLTCL1-212ENST00000622493 NMT2O60551 498 aa16.62■□□□□ 0.25
CLTCL1-212ENST00000622493 DDAH1O94760 285 aa16.62■□□□□ 0.25
CLTCL1-212ENST00000622493 CPLX2Q6PUV4 134 aaKnown RBP16.62■□□□□ 0.25
CLTCL1-212ENST00000622493 KIF3AQ9Y496 699 aa16.62■□□□□ 0.25
CLTCL1-212ENST00000622493 GOLGA8AA7E2F4 631 aa16.62■□□□□ 0.25
CLTCL1-212ENST00000622493 CDKL5O76039 1030 aa16.62■□□□□ 0.25
CLTCL1-212ENST00000622493 PDCP20941 246 aa16.62■□□□□ 0.25
CLTCL1-212ENST00000622493 EPS15P42566 896 aa16.62■□□□□ 0.25
CLTCL1-212ENST00000622493 CERKLQ49MI3 558 aaPredicted RBP16.62■□□□□ 0.25
CLTCL1-212ENST00000622493 FANCBQ8NB91 859 aa16.62■□□□□ 0.25
CLTCL1-212ENST00000622493 NSUN7Q8NE18 718 aaKnown RBP16.62■□□□□ 0.25
CLTCL1-212ENST00000622493 L3MBTL3Q96JM7 780 aaPredicted RBP16.62■□□□□ 0.25
CLTCL1-212ENST00000622493 KAT14Q9H8E8 782 aa16.62■□□□□ 0.25
CLTCL1-212ENST00000622493 NCOA5Q9HCD5 579 aaKnown RBP16.62■□□□□ 0.25
CLTCL1-212ENST00000622493 ADARB2Q9NS39 739 aaKnown RBP16.62■□□□□ 0.25
CLTCL1-212ENST00000622493 PGAP2Q9UHJ9 254 aa16.62■□□□□ 0.25
CLTCL1-212ENST00000622493 HACL1Q9UJ83 578 aa16.62■□□□□ 0.25
CLTCL1-212ENST00000622493 TROAPQ12815 778 aa16.61■□□□□ 0.25
CLTCL1-212ENST00000622493 RASA3Q14644 834 aa16.61■□□□□ 0.25
CLTCL1-212ENST00000622493 APOBEC3FQ8IUX4 373 aaKnown RBP16.61■□□□□ 0.25
CLTCL1-212ENST00000622493 MAP3K14Q99558 947 aa16.61■□□□□ 0.25
CLTCL1-212ENST00000622493 TMEM39BQ9GZU3 492 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms