RNA–Protein interactions for RNA: ENST00000622483.4

PCSK6-220, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 3,132 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-220ENST00000622483 ATP6V1AP38606 617 aa24.61■■□□□ 1.53
PCSK6-220ENST00000622483 FXR1P51114 621 aaKnown RBP eCLIP24.61■■□□□ 1.53
PCSK6-220ENST00000622483 ALG1Q9BT22 464 aa24.61■■□□□ 1.53
PCSK6-220ENST00000622483 SERTAD1Q9UHV2 236 aa24.61■■□□□ 1.53
PCSK6-220ENST00000622483 HPCAL4Q9UM19 191 aa24.61■■□□□ 1.53
PCSK6-220ENST00000622483 PHRF1Q9P1Y6 1649 aaKnown RBP24.61■■□□□ 1.53
PCSK6-220ENST00000622483 STIM1Q13586 685 aa24.61■■□□□ 1.53
PCSK6-220ENST00000622483 NGLY1Q96IV0 654 aa24.61■■□□□ 1.53
PCSK6-220ENST00000622483 MYD88Q99836 296 aa24.61■■□□□ 1.53
PCSK6-220ENST00000622483 CCDC82Q8N4S0 544 aa24.6■■□□□ 1.53
PCSK6-220ENST00000622483 CRACR2AQ9BSW2 395 aa24.6■■□□□ 1.53
PCSK6-220ENST00000622483 MYL10Q9BUA6 226 aa24.6■■□□□ 1.53
PCSK6-220ENST00000622483 CDHR2Q9BYE9 1310 aa24.6■■□□□ 1.53
PCSK6-220ENST00000622483 CCDC148Q8NFR7 591 aa24.6■■□□□ 1.53
PCSK6-220ENST00000622483 LINS1Q8NG48 757 aa24.6■■□□□ 1.53
PCSK6-220ENST00000622483 CD248Q9HCU0 757 aa24.6■■□□□ 1.53
PCSK6-220ENST00000622483 SCP2P22307 547 aa24.59■■□□□ 1.53
PCSK6-220ENST00000622483 INPP5BP32019 993 aa24.59■■□□□ 1.53
PCSK6-220ENST00000622483 BRAPQ7Z569 592 aa24.59■■□□□ 1.53
PCSK6-220ENST00000622483 GBP3Q9H0R5 595 aa24.59■■□□□ 1.53
PCSK6-220ENST00000622483 MYO6Q9UM54 1294 aa24.59■■□□□ 1.53
PCSK6-220ENST00000622483 HPS5Q9UPZ3 1129 aa24.59■■□□□ 1.53
PCSK6-220ENST00000622483 HPSEQ9Y251 543 aa24.59■■□□□ 1.53
PCSK6-220ENST00000622483 AFMP43652 599 aa24.59■■□□□ 1.53
PCSK6-220ENST00000622483 TDO2P48775 406 aa24.59■■□□□ 1.53
PCSK6-220ENST00000622483 IRAK1P51617 712 aa24.59■■□□□ 1.53
PCSK6-220ENST00000622483 MMS19Q96T76 1030 aa24.59■■□□□ 1.53
PCSK6-220ENST00000622483 CENPHQ9H3R5 247 aa24.59■■□□□ 1.53
PCSK6-220ENST00000622483 GOLGA6CA6NDK9 693 aa24.59■■□□□ 1.53
PCSK6-220ENST00000622483 RNF225M0QZC1 329 aaPredicted RBP24.59■■□□□ 1.53
PCSK6-220ENST00000622483 GOLGA6DP0CG33 693 aa24.59■■□□□ 1.53
PCSK6-220ENST00000622483 USP49Q70CQ1 688 aa24.59■■□□□ 1.53
PCSK6-220ENST00000622483 GOLGA6AQ9NYA3 693 aa24.59■■□□□ 1.53
PCSK6-220ENST00000622483 MYH15Q9Y2K3 1946 aa24.59■■□□□ 1.53
PCSK6-220ENST00000622483 WASHC4Q2M389 1173 aa24.58■■□□□ 1.53
PCSK6-220ENST00000622483 CPLX2Q6PUV4 134 aaKnown RBP24.58■■□□□ 1.53
PCSK6-220ENST00000622483 UBE3BQ7Z3V4 1068 aa24.58■■□□□ 1.53
PCSK6-220ENST00000622483 KBTBD3Q8NAB2 608 aa24.58■■□□□ 1.53
PCSK6-220ENST00000622483 FAM76AQ8TAV0 307 aa24.58■■□□□ 1.53
PCSK6-220ENST00000622483 ROBO1Q9Y6N7 1651 aa24.58■■□□□ 1.53
PCSK6-220ENST00000622483 NR1I3Q14994 352 aa24.58■■□□□ 1.53
PCSK6-220ENST00000622483 FAM98CQ17RN3 349 aaKnown RBP24.58■■□□□ 1.53
PCSK6-220ENST00000622483 NKX2-3Q8TAU0 364 aa24.58■■□□□ 1.53
PCSK6-220ENST00000622483 STAMQ92783 540 aa24.58■■□□□ 1.53
PCSK6-220ENST00000622483 ZBTB3Q9H5J0 574 aa24.58■■□□□ 1.53
PCSK6-220ENST00000622483 M0R2C6 588 aa24.57■■□□□ 1.52
PCSK6-220ENST00000622483 CPP00450 1065 aa24.57■■□□□ 1.52
PCSK6-220ENST00000622483 ZNF18P17022 549 aa24.57■■□□□ 1.52
PCSK6-220ENST00000622483 GNGT1P63211 74 aa24.57■■□□□ 1.52
PCSK6-220ENST00000622483 FKBP4Q02790 459 aaKnown RBP eCLIP24.57■■□□□ 1.52
PCSK6-220ENST00000622483 POSTNQ15063 836 aa24.57■■□□□ 1.52
PCSK6-220ENST00000622483 KRT40Q6A162 431 aa24.57■■□□□ 1.52
PCSK6-220ENST00000622483 MICU3Q86XE3 530 aa24.57■■□□□ 1.52
PCSK6-220ENST00000622483 CEP89Q96ST8 783 aa24.57■■□□□ 1.52
PCSK6-220ENST00000622483 GSCP56915 257 aaPredicted RBP24.57■■□□□ 1.52
PCSK6-220ENST00000622483 SWT1Q5T5J6 900 aaKnown RBP24.57■■□□□ 1.52
PCSK6-220ENST00000622483 AGXT2Q9BYV1 514 aa24.57■■□□□ 1.52
PCSK6-220ENST00000622483 PAG1Q9NWQ8 432 aa24.57■■□□□ 1.52
PCSK6-220ENST00000622483 PCDH11XQ9BZA7 1347 aa24.57■■□□□ 1.52
PCSK6-220ENST00000622483 PCDH11YQ9BZA8 1340 aa24.57■■□□□ 1.52
PCSK6-220ENST00000622483 TTC39AQ5SRH9 613 aa24.56■■□□□ 1.52
PCSK6-220ENST00000622483 SMIM5Q71RC9 77 aa24.56■■□□□ 1.52
PCSK6-220ENST00000622483 MAST3O60307 1309 aa24.56■■□□□ 1.52
PCSK6-220ENST00000622483 ERVK-24P63145 666 aa24.56■■□□□ 1.52
PCSK6-220ENST00000622483 PDIA6Q15084 440 aa24.56■■□□□ 1.52
PCSK6-220ENST00000622483 HAUS7Q99871 368 aa24.56■■□□□ 1.52
PCSK6-220ENST00000622483 TMOD3Q9NYL9 352 aa24.56■■□□□ 1.52
PCSK6-220ENST00000622483 ZNF185O15231 689 aa24.55■■□□□ 1.52
PCSK6-220ENST00000622483 ATP1A2P50993 1020 aa24.55■■□□□ 1.52
PCSK6-220ENST00000622483 PTPAQ15257 358 aa24.55■■□□□ 1.52
PCSK6-220ENST00000622483 RESP18Q5W5W9 173 aa24.55■■□□□ 1.52
PCSK6-220ENST00000622483 NBPF3Q9H094 633 aa24.55■■□□□ 1.52
PCSK6-220ENST00000622483 SENP2Q9HC62 589 aa24.55■■□□□ 1.52
PCSK6-220ENST00000622483 PTPN12Q05209 780 aaKnown RBP24.55■■□□□ 1.52
PCSK6-220ENST00000622483 PIGBQ92521 554 aa24.55■■□□□ 1.52
PCSK6-220ENST00000622483 KCNG1Q9UIX4 513 aa24.55■■□□□ 1.52
PCSK6-220ENST00000622483 ZEB2O60315 1214 aa24.55■■□□□ 1.52
PCSK6-220ENST00000622483 PALLDQ8WX93 1383 aa24.54■■□□□ 1.52
PCSK6-220ENST00000622483 FRMD3A2A2Y4 597 aa24.54■■□□□ 1.52
PCSK6-220ENST00000622483 AGPSO00116 658 aa24.54■■□□□ 1.52
PCSK6-220ENST00000622483 CLGNO14967 610 aa24.54■■□□□ 1.52
PCSK6-220ENST00000622483 MATR3P43243 847 aaKnown RBP eCLIP24.54■■□□□ 1.522e-6■■■■□ 21.4
PCSK6-220ENST00000622483 KCTD16Q68DU8 428 aa24.54■■□□□ 1.52
PCSK6-220ENST00000622483 TTLL7Q6ZT98 887 aa24.54■■□□□ 1.52
PCSK6-220ENST00000622483 RRP36Q96EU6 259 aaKnown RBP24.54■■□□□ 1.52
PCSK6-220ENST00000622483 CCDC85AQ96PX6 553 aaPredicted RBP24.54■■□□□ 1.52
PCSK6-220ENST00000622483 NUP88Q99567 741 aaPredicted RBP24.54■■□□□ 1.52
PCSK6-220ENST00000622483 USP54Q70EL1 1684 aa24.54■■□□□ 1.52
PCSK6-220ENST00000622483 PES1O00541 588 aaKnown RBP24.54■■□□□ 1.52
PCSK6-220ENST00000622483 GPIHBP1Q8IV16 184 aa24.54■■□□□ 1.52
PCSK6-220ENST00000622483 JMYQ8N9B5 988 aa24.54■■□□□ 1.52
PCSK6-220ENST00000622483 CHP1Q99653 195 aa24.54■■□□□ 1.52
PCSK6-220ENST00000622483 FAM107BQ9H098 131 aa24.54■■□□□ 1.52
PCSK6-220ENST00000622483 VPS16Q9H269 839 aa24.54■■□□□ 1.52
PCSK6-220ENST00000622483 GYPCP04921 128 aa24.53■■□□□ 1.52
PCSK6-220ENST00000622483 SNRPA1P09661 255 aaKnown RBP24.53■■□□□ 1.52
PCSK6-220ENST00000622483 CAGE1Q8TC20 777 aa24.53■■□□□ 1.52
PCSK6-220ENST00000622483 COL18A1P39060 1754 aa24.53■■□□□ 1.52
PCSK6-220ENST00000622483 MFAP3LO75121 409 aa24.53■■□□□ 1.52
PCSK6-220ENST00000622483 ATP1A1P05023 1023 aaKnown RBP24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms