RNA–Protein interactions for RNA: ENST00000622134.4

COL25A1-209, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 4,819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-209ENST00000622134 MTIF2P46199 727 aaKnown RBP11.71□□□□□ -0.54
COL25A1-209ENST00000622134 DNM2P50570 870 aa11.71□□□□□ -0.54
COL25A1-209ENST00000622134 TCERG1LQ5VWI1 586 aa11.71□□□□□ -0.54
COL25A1-209ENST00000622134 CDAN1Q8IWY9 1227 aa11.71□□□□□ -0.54
COL25A1-209ENST00000622134 CCDC113Q9H0I3 377 aa11.71□□□□□ -0.54
COL25A1-209ENST00000622134 PTPRMP28827 1452 aa11.7□□□□□ -0.54
COL25A1-209ENST00000622134 HSPA1LP34931 641 aa11.7□□□□□ -0.54
COL25A1-209ENST00000622134 PPP1R2P41236 205 aa11.7□□□□□ -0.54
COL25A1-209ENST00000622134 SPATA24Q86W54 205 aa11.7□□□□□ -0.54
COL25A1-209ENST00000622134 CYLC1P35663 651 aaPredicted RBP11.7□□□□□ -0.54
COL25A1-209ENST00000622134 SPAG1Q07617 926 aa11.7□□□□□ -0.54
COL25A1-209ENST00000622134 CCDC129Q6ZRS4 1044 aa11.7□□□□□ -0.54
COL25A1-209ENST00000622134 LMNTD2Q8IXW0 634 aa11.7□□□□□ -0.54
COL25A1-209ENST00000622134 KBTBD3Q8NAB2 608 aa11.7□□□□□ -0.54
COL25A1-209ENST00000622134 IL17REQ8NFR9 667 aa11.7□□□□□ -0.54
COL25A1-209ENST00000622134 CLSTN2Q9H4D0 955 aa11.7□□□□□ -0.54
COL25A1-209ENST00000622134 MED4Q9NPJ6 270 aa11.7□□□□□ -0.54
COL25A1-209ENST00000622134 SWAP70Q9UH65 585 aa11.7□□□□□ -0.54
COL25A1-209ENST00000622134 SAP30BPQ9UHR5 308 aaKnown RBP11.7□□□□□ -0.54
COL25A1-209ENST00000622134 USP19O94966 1318 aa11.7□□□□□ -0.54
COL25A1-209ENST00000622134 FAM13AO94988 1023 aa11.7□□□□□ -0.54
COL25A1-209ENST00000622134 PDLIM2Q96JY6 352 aa11.7□□□□□ -0.54
COL25A1-209ENST00000622134 ZBTB1Q9Y2K1 713 aa11.7□□□□□ -0.54
COL25A1-209ENST00000622134 MYO1CO00159 1063 aa11.7□□□□□ -0.54
COL25A1-209ENST00000622134 ZSCAN20P17040 1043 aaPredicted RBP11.7□□□□□ -0.54
COL25A1-209ENST00000622134 HAUS3Q68CZ6 603 aa11.7□□□□□ -0.54
COL25A1-209ENST00000622134 KLHL10Q6JEL2 608 aa11.7□□□□□ -0.54
COL25A1-209ENST00000622134 HEG1Q9ULI3 1381 aa11.7□□□□□ -0.54
COL25A1-209ENST00000622134 GLI2P10070 1586 aa11.69□□□□□ -0.54
COL25A1-209ENST00000622134 RFX1P22670 979 aa11.69□□□□□ -0.54
COL25A1-209ENST00000622134 SLC8A1P32418 973 aa11.69□□□□□ -0.54
COL25A1-209ENST00000622134 MAGEA9P43362 315 aa11.69□□□□□ -0.54
COL25A1-209ENST00000622134 VAV2P52735 878 aa11.69□□□□□ -0.54
COL25A1-209ENST00000622134 TIMM10P62072 90 aa11.69□□□□□ -0.54
COL25A1-209ENST00000622134 GUCY1B3Q02153 619 aa11.69□□□□□ -0.54
COL25A1-209ENST00000622134 CPLX4Q7Z7G2 160 aa11.69□□□□□ -0.54
COL25A1-209ENST00000622134 C2orf69Q8N8R5 385 aa11.69□□□□□ -0.54
COL25A1-209ENST00000622134 GPT2Q8TD30 523 aa11.69□□□□□ -0.54
COL25A1-209ENST00000622134 BAG1Q99933 345 aaPredicted RBP11.69□□□□□ -0.54
COL25A1-209ENST00000622134 LACTBP83111 547 aaPredicted RBP11.69□□□□□ -0.54
COL25A1-209ENST00000622134 PPFIA1Q13136 1202 aa11.69□□□□□ -0.54
COL25A1-209ENST00000622134 CCDC6Q16204 474 aa11.69□□□□□ -0.54
COL25A1-209ENST00000622134 KRT24Q2M2I5 525 aa11.69□□□□□ -0.54
COL25A1-209ENST00000622134 MCF2L2Q86YR7 1114 aa11.69□□□□□ -0.54
COL25A1-209ENST00000622134 JAG2Q9Y219 1238 aa11.69□□□□□ -0.54
COL25A1-209ENST00000622134 CRB1P82279 1406 aa11.69□□□□□ -0.54
COL25A1-209ENST00000622134 PLEKHG2Q9H7P9 1386 aa11.69□□□□□ -0.54
COL25A1-209ENST00000622134 STAT6P42226 847 aa11.69□□□□□ -0.54
COL25A1-209ENST00000622134 PRKG1Q13976 671 aa11.69□□□□□ -0.54
COL25A1-209ENST00000622134 ZNF569Q5MCW4 686 aa11.69□□□□□ -0.54
COL25A1-209ENST00000622134 C6orf163Q5TEZ5 329 aa11.69□□□□□ -0.54
COL25A1-209ENST00000622134 PLEKHM2Q8IWE5 1019 aa11.69□□□□□ -0.54
COL25A1-209ENST00000622134 SUCLG2Q96I99 432 aa11.69□□□□□ -0.54
COL25A1-209ENST00000622134 NBPF3Q9H094 633 aa11.69□□□□□ -0.54
COL25A1-209ENST00000622134 NARFQ9UHQ1 456 aa11.69□□□□□ -0.54
COL25A1-209ENST00000622134 ARHGAP6O43182 974 aa11.69□□□□□ -0.54
COL25A1-209ENST00000622134 BUB1BO60566 1050 aaPredicted RBP11.69□□□□□ -0.54
COL25A1-209ENST00000622134 SYKP43405 635 aa11.69□□□□□ -0.54
COL25A1-209ENST00000622134 KRT83P78385 493 aa11.69□□□□□ -0.54
COL25A1-209ENST00000622134 NEDD9Q14511 834 aa11.69□□□□□ -0.54
COL25A1-209ENST00000622134 FAM71BQ8TC56 605 aa11.69□□□□□ -0.54
COL25A1-209ENST00000622134 IFT74Q96LB3 600 aa11.69□□□□□ -0.54
COL25A1-209ENST00000622134 RNF216Q9NWF9 866 aaPredicted RBP11.69□□□□□ -0.54
COL25A1-209ENST00000622134 PNMA3Q9UL41 463 aa11.69□□□□□ -0.54
COL25A1-209ENST00000622134 KRT86O43790 486 aa11.68□□□□□ -0.54
COL25A1-209ENST00000622134 TAF5LO75529 589 aa11.68□□□□□ -0.54
COL25A1-209ENST00000622134 SMTNP53814 917 aa11.68□□□□□ -0.54
COL25A1-209ENST00000622134 CEP85LQ5SZL2 805 aa11.68□□□□□ -0.54
COL25A1-209ENST00000622134 ABT1Q9ULW3 272 aaKnown RBP11.68□□□□□ -0.54
COL25A1-209ENST00000622134 ZNF853P0CG23 659 aa11.68□□□□□ -0.54
COL25A1-209ENST00000622134 SLFNL1Q499Z3 407 aa11.68□□□□□ -0.54
COL25A1-209ENST00000622134 TBC1D5Q92609 795 aa11.68□□□□□ -0.54
COL25A1-209ENST00000622134 DBNDD2Q9BQY9 259 aa11.68□□□□□ -0.54
COL25A1-209ENST00000622134 LARP6Q9BRS8 491 aaKnown RBP11.68□□□□□ -0.54
COL25A1-209ENST00000622134 AATFQ9NY61 560 aaKnown RBP eCLIP11.68□□□□□ -0.54
COL25A1-209ENST00000622134 PPM1FP49593 454 aaPredicted RBP11.68□□□□□ -0.54
COL25A1-209ENST00000622134 MMS22LQ6ZRQ5 1243 aa11.68□□□□□ -0.54
COL25A1-209ENST00000622134 STMN4Q9H169 189 aaPredicted RBP11.68□□□□□ -0.54
COL25A1-209ENST00000622134 GPR108Q9NPR9 543 aa11.68□□□□□ -0.54
COL25A1-209ENST00000622134 ATG3Q9NT62 314 aa11.68□□□□□ -0.54
COL25A1-209ENST00000622134 PRKAG2Q9UGJ0 569 aa11.68□□□□□ -0.54
COL25A1-209ENST00000622134 MORC2Q9Y6X9 1032 aaPredicted RBP11.68□□□□□ -0.54
COL25A1-209ENST00000622134 PLA2R1Q13018 1463 aa11.68□□□□□ -0.54
COL25A1-209ENST00000622134 CIAO1O76071 339 aa11.67□□□□□ -0.54
COL25A1-209ENST00000622134 TXNRD1Q16881 649 aa11.67□□□□□ -0.54
COL25A1-209ENST00000622134 ERFEQ4G0M1 354 aa11.67□□□□□ -0.54
COL25A1-209ENST00000622134 FBF1Q8TES7 1133 aa11.67□□□□□ -0.54
COL25A1-209ENST00000622134 COA1Q9GZY4 146 aa11.67□□□□□ -0.54
COL25A1-209ENST00000622134 PYCARDQ9ULZ3 195 aa11.67□□□□□ -0.54
COL25A1-209ENST00000622134 MRPL11Q9Y3B7 192 aaKnown RBP11.67□□□□□ -0.54
COL25A1-209ENST00000622134 GRAPQ13588 217 aa11.67□□□□□ -0.54
COL25A1-209ENST00000622134 CFAP58Q5T655 872 aa11.67□□□□□ -0.54
COL25A1-209ENST00000622134 NSMFQ6X4W1 530 aa11.67□□□□□ -0.54
COL25A1-209ENST00000622134 BRAPQ7Z569 592 aa11.67□□□□□ -0.54
COL25A1-209ENST00000622134 KIAA0825Q8IV33 1275 aa11.67□□□□□ -0.54
COL25A1-209ENST00000622134 CCDC24Q8N4L8 307 aa11.67□□□□□ -0.54
COL25A1-209ENST00000622134 GRAPLQ8TC17 118 aaPredicted RBP11.67□□□□□ -0.54
COL25A1-209ENST00000622134 PLVAPQ9BX97 442 aa11.67□□□□□ -0.54
COL25A1-209ENST00000622134 DHX36Q9H2U1 1008 aaKnown RBP11.67□□□□□ -0.54
COL25A1-209ENST00000622134 PRR36Q9H6K5 1346 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms