RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 MLKLQ8NB16 471 aa17.97■□□□□ 0.47
NPHP4-211ENST00000622020 SDR42E1Q8WUS8 393 aa17.97■□□□□ 0.47
NPHP4-211ENST00000622020 GOLGA1Q92805 767 aa17.97■□□□□ 0.47
NPHP4-211ENST00000622020 TMOD3Q9NYL9 352 aa17.97■□□□□ 0.47
NPHP4-211ENST00000622020 NR1I3Q14994 352 aa17.96■□□□□ 0.47
NPHP4-211ENST00000622020 TTF1Q15361 905 aaPredicted RBP17.96■□□□□ 0.47
NPHP4-211ENST00000622020 UBE3CQ15386 1083 aa17.96■□□□□ 0.47
NPHP4-211ENST00000622020 AKNAD1Q5T1N1 836 aa17.96■□□□□ 0.47
NPHP4-211ENST00000622020 ENOX1Q8TC92 643 aaKnown RBP17.96■□□□□ 0.47
NPHP4-211ENST00000622020 ADAMTS7Q9UKP4 1686 aa17.96■□□□□ 0.47
NPHP4-211ENST00000622020 BAZ2BQ9UIF8 2168 aaKnown RBP17.96■□□□□ 0.47
NPHP4-211ENST00000622020 PATL2C9JE40 543 aaKnown RBP17.96■□□□□ 0.47
NPHP4-211ENST00000622020 H3BQF6 201 aa17.96■□□□□ 0.47
NPHP4-211ENST00000622020 CHMP4BP1P59074 171 aa17.96■□□□□ 0.47
NPHP4-211ENST00000622020 RASGRF1Q13972 1273 aa17.96■□□□□ 0.47
NPHP4-211ENST00000622020 ZNF174Q15697 407 aa17.96■□□□□ 0.47
NPHP4-211ENST00000622020 FUT8Q9BYC5 575 aa17.96■□□□□ 0.47
NPHP4-211ENST00000622020 ERICH2A1L162 156 aa17.96■□□□□ 0.46
NPHP4-211ENST00000622020 ACTN4O43707 911 aaKnown RBP17.96■□□□□ 0.46
NPHP4-211ENST00000622020 IFNAR1P17181 557 aa17.96■□□□□ 0.46
NPHP4-211ENST00000622020 CTSWP56202 376 aa17.96■□□□□ 0.46
NPHP4-211ENST00000622020 RSRC2Q7L4I2 434 aaKnown RBP17.96■□□□□ 0.46
NPHP4-211ENST00000622020 SGMS1Q86VZ5 419 aa17.96■□□□□ 0.46
NPHP4-211ENST00000622020 SPATA5Q8NB90 893 aa17.96■□□□□ 0.46
NPHP4-211ENST00000622020 RIC1Q4ADV7 1423 aa17.95■□□□□ 0.46
NPHP4-211ENST00000622020 FAM237AA0A1B0GTK4 181 aa17.95■□□□□ 0.46
NPHP4-211ENST00000622020 TCRBV5S4A2TA0A5A2 114 aa17.95■□□□□ 0.46
NPHP4-211ENST00000622020 GSG1L2A8MUP6 293 aa17.95■□□□□ 0.46
NPHP4-211ENST00000622020 CAPN2P17655 700 aa17.95■□□□□ 0.46
NPHP4-211ENST00000622020 SKIDA1Q1XH10 827 aa17.95■□□□□ 0.46
NPHP4-211ENST00000622020 NLRP10Q86W26 655 aa17.95■□□□□ 0.46
NPHP4-211ENST00000622020 FCHSD1Q86WN1 690 aa17.95■□□□□ 0.46
NPHP4-211ENST00000622020 VPS16Q9H269 839 aa17.95■□□□□ 0.46
NPHP4-211ENST00000622020 WDR19Q8NEZ3 1342 aa17.95■□□□□ 0.46
NPHP4-211ENST00000622020 N4BP1O75113 896 aaKnown RBP17.95■□□□□ 0.46
NPHP4-211ENST00000622020 TPM1P09493 284 aa17.95■□□□□ 0.46
NPHP4-211ENST00000622020 BCAMP50895 628 aa17.95■□□□□ 0.46
NPHP4-211ENST00000622020 RILPL1Q5EBL4 403 aa17.95■□□□□ 0.46
NPHP4-211ENST00000622020 PDE11AQ9HCR9 933 aa17.95■□□□□ 0.46
NPHP4-211ENST00000622020 ERVV-2B6SEH9 535 aa17.94■□□□□ 0.46
NPHP4-211ENST00000622020 PES1O00541 588 aaKnown RBP17.94■□□□□ 0.46
NPHP4-211ENST00000622020 EEF2KMTQ96G04 330 aa17.94■□□□□ 0.46
NPHP4-211ENST00000622020 PNKPQ96T60 521 aa17.94■□□□□ 0.46
NPHP4-211ENST00000622020 ABCF2Q9UG63 623 aa17.94■□□□□ 0.46
NPHP4-211ENST00000622020 ADGRG1Q9Y653 693 aa17.94■□□□□ 0.46
NPHP4-211ENST00000622020 CYP2D7A0A087X1C5 515 aa17.94■□□□□ 0.46
NPHP4-211ENST00000622020 SARSP49591 514 aaKnown RBP17.94■□□□□ 0.46
NPHP4-211ENST00000622020 FXR1P51114 621 aaKnown RBP eCLIP17.94■□□□□ 0.46
NPHP4-211ENST00000622020 CRACR2BQ8N4Y2 399 aaPredicted RBP17.94■□□□□ 0.46
NPHP4-211ENST00000622020 VPS18Q9P253 973 aa17.94■□□□□ 0.46
NPHP4-211ENST00000622020 DACH1Q9UI36 760 aa17.94■□□□□ 0.46
NPHP4-211ENST00000622020 KIF5CO60282 957 aa17.93■□□□□ 0.46
NPHP4-211ENST00000622020 TXLNAP40222 546 aa17.93■□□□□ 0.46
NPHP4-211ENST00000622020 PLCD1P51178 756 aa17.93■□□□□ 0.46
NPHP4-211ENST00000622020 EVA1CP58658 441 aa17.93■□□□□ 0.46
NPHP4-211ENST00000622020 MAP3K12Q12852 859 aa17.93■□□□□ 0.46
NPHP4-211ENST00000622020 FANCBQ8NB91 859 aa17.93■□□□□ 0.46
NPHP4-211ENST00000622020 SYMPKQ92797 1274 aaKnown RBP17.93■□□□□ 0.46
NPHP4-211ENST00000622020 SHISA4Q96DD7 197 aa17.93■□□□□ 0.46
NPHP4-211ENST00000622020 TFR2Q9UP52 801 aa17.93■□□□□ 0.46
NPHP4-211ENST00000622020 MYO5AQ9Y4I1 1855 aaKnown RBP17.93■□□□□ 0.46
NPHP4-211ENST00000622020 GOLGA6L9A6NEM1 432 aa17.93■□□□□ 0.46
NPHP4-211ENST00000622020 LIFRP42702 1097 aa17.93■□□□□ 0.46
NPHP4-211ENST00000622020 AKAP17AQ02040 695 aaKnown RBP17.93■□□□□ 0.46
NPHP4-211ENST00000622020 SLC4A8Q2Y0W8 1093 aa17.93■□□□□ 0.46
NPHP4-211ENST00000622020 SLC35F6Q8N357 371 aa17.93■□□□□ 0.46
NPHP4-211ENST00000622020 RABGGTAQ92696 567 aa17.93■□□□□ 0.46
NPHP4-211ENST00000622020 HINFPQ9BQA5 517 aa17.93■□□□□ 0.46
NPHP4-211ENST00000622020 UBAC1Q9BSL1 405 aa17.93■□□□□ 0.46
NPHP4-211ENST00000622020 ADAM21Q9UKJ8 722 aa17.93■□□□□ 0.46
NPHP4-211ENST00000622020 CTNND2Q9UQB3 1225 aa17.93■□□□□ 0.46
NPHP4-211ENST00000622020 SYNRGQ9UMZ2 1314 aa17.93■□□□□ 0.46
NPHP4-211ENST00000622020 RNF225M0QZC1 329 aaPredicted RBP17.93■□□□□ 0.46
NPHP4-211ENST00000622020 IL2RBP14784 551 aa17.93■□□□□ 0.46
NPHP4-211ENST00000622020 RAD51AP2Q09MP3 1159 aa17.93■□□□□ 0.46
NPHP4-211ENST00000622020 SART3Q15020 963 aaKnown RBP17.93■□□□□ 0.46
NPHP4-211ENST00000622020 ZNF654Q8IZM8 581 aa17.93■□□□□ 0.46
NPHP4-211ENST00000622020 VGLL2Q8N8G2 317 aa17.93■□□□□ 0.46
NPHP4-211ENST00000622020 WASF1Q92558 559 aa17.93■□□□□ 0.46
NPHP4-211ENST00000622020 LRP2BPQ9P2M1 347 aa17.93■□□□□ 0.46
NPHP4-211ENST00000622020 SRPRBQ9Y5M8 271 aaKnown RBP17.93■□□□□ 0.46
NPHP4-211ENST00000622020 V9GY48 417 aaPredicted RBP17.93■□□□□ 0.46
NPHP4-211ENST00000622020 DPYDQ12882 1025 aa17.92■□□□□ 0.46
NPHP4-211ENST00000622020 GIGYF2Q6Y7W6 1299 aaKnown RBP17.92■□□□□ 0.46
NPHP4-211ENST00000622020 TICAM2Q86XR7 235 aa17.92■□□□□ 0.46
NPHP4-211ENST00000622020 PIGBQ92521 554 aa17.92■□□□□ 0.46
NPHP4-211ENST00000622020 A0A1B0GTH6 734 aa17.92■□□□□ 0.46
NPHP4-211ENST00000622020 WTIPA6NIX2 430 aaPredicted RBP17.92■□□□□ 0.46
NPHP4-211ENST00000622020 CAMTA1Q9Y6Y1 1673 aa17.92■□□□□ 0.46
NPHP4-211ENST00000622020 DEXIO95424 95 aa17.91■□□□□ 0.46
NPHP4-211ENST00000622020 C4AP0C0L4 1744 aa17.91■□□□□ 0.46
NPHP4-211ENST00000622020 C4BP0C0L5 1744 aa17.91■□□□□ 0.46
NPHP4-211ENST00000622020 PAGE5Q96GU1 130 aa17.91■□□□□ 0.46
NPHP4-211ENST00000622020 TJP1Q07157 1748 aa17.91■□□□□ 0.46
NPHP4-211ENST00000622020 GDAP1L1Q96MZ0 367 aa17.91■□□□□ 0.46
NPHP4-211ENST00000622020 SLF1Q9BQI6 1058 aa17.91■□□□□ 0.46
NPHP4-211ENST00000622020 FOXP1Q9H334 677 aaPredicted RBP17.91■□□□□ 0.46
NPHP4-211ENST00000622020 ANKZF1Q9H8Y5 726 aa17.91■□□□□ 0.46
NPHP4-211ENST00000622020 TRIM10Q9UDY6 481 aa17.91■□□□□ 0.46
NPHP4-211ENST00000622020 TRIM75PA6NK02 468 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms