RNA–Protein interactions for RNA: ENST00000621999.4

SCAMP1-207, Transcript of secretory carrier membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP1, Length 4,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-207ENST00000621999 CUL5Q93034 780 aa14.45□□□□□ -0.1
SCAMP1-207ENST00000621999 RBM28Q9NW13 759 aaKnown RBP14.45□□□□□ -0.1
SCAMP1-207ENST00000621999 ZNF70Q9UC06 446 aaPredicted RBP14.45□□□□□ -0.1
SCAMP1-207ENST00000621999 THSD7AQ9UPZ6 1657 aa14.45□□□□□ -0.1
SCAMP1-207ENST00000621999 PDIA4P13667 645 aaKnown RBP14.45□□□□□ -0.1
SCAMP1-207ENST00000621999 PLCD1P51178 756 aa14.45□□□□□ -0.1
SCAMP1-207ENST00000621999 ANGEL2Q5VTE6 544 aaKnown RBP14.45□□□□□ -0.1
SCAMP1-207ENST00000621999 SDF4Q9BRK5 362 aa14.45□□□□□ -0.1
SCAMP1-207ENST00000621999 FAM205AQ6ZU69 1335 aa14.45□□□□□ -0.1
SCAMP1-207ENST00000621999 NUP98P52948 1817 aa14.45□□□□□ -0.1
SCAMP1-207ENST00000621999 GH2P01242 217 aa14.44□□□□□ -0.1
SCAMP1-207ENST00000621999 TMOD4Q9NZQ9 345 aa14.44□□□□□ -0.1
SCAMP1-207ENST00000621999 NHSQ6T4R5 1651 aa14.44□□□□□ -0.1
SCAMP1-207ENST00000621999 SYT1P21579 422 aa14.44□□□□□ -0.1
SCAMP1-207ENST00000621999 PDIA3P30101 505 aaKnown RBP14.44□□□□□ -0.1
SCAMP1-207ENST00000621999 C12orf60Q5U649 245 aa14.44□□□□□ -0.1
SCAMP1-207ENST00000621999 STOX1Q6ZVD7 989 aa14.44□□□□□ -0.1
SCAMP1-207ENST00000621999 KRT26Q7Z3Y9 468 aa14.44□□□□□ -0.1
SCAMP1-207ENST00000621999 CPXCR1Q8N123 301 aa14.44□□□□□ -0.1
SCAMP1-207ENST00000621999 JMYQ8N9B5 988 aa14.44□□□□□ -0.1
SCAMP1-207ENST00000621999 INTS4Q96HW7 963 aaKnown RBP14.44□□□□□ -0.1
SCAMP1-207ENST00000621999 UBA5Q9GZZ9 404 aa14.44□□□□□ -0.1
SCAMP1-207ENST00000621999 SKOR2Q2VWA4 1001 aaPredicted RBP14.44□□□□□ -0.1
SCAMP1-207ENST00000621999 CERS5Q8N5B7 392 aa14.44□□□□□ -0.1
SCAMP1-207ENST00000621999 OSBPL5Q9H0X9 879 aaPredicted RBP14.44□□□□□ -0.1
SCAMP1-207ENST00000621999 NBPF9Q3BBW0 867 aa14.44□□□□□ -0.1
SCAMP1-207ENST00000621999 APOA5Q6Q788 366 aa14.44□□□□□ -0.1
SCAMP1-207ENST00000621999 CYB5R4Q7L1T6 521 aa14.44□□□□□ -0.1
SCAMP1-207ENST00000621999 STAG1Q8WVM7 1258 aa14.44□□□□□ -0.1
SCAMP1-207ENST00000621999 RIOK1Q9BRS2 568 aaKnown RBP14.44□□□□□ -0.1
SCAMP1-207ENST00000621999 KLRG2A4D1S0 409 aaPredicted RBP14.43□□□□□ -0.1
SCAMP1-207ENST00000621999 ZNF274Q96GC6 653 aaPredicted RBP14.43□□□□□ -0.1
SCAMP1-207ENST00000621999 GGA3Q9NZ52 723 aa14.43□□□□□ -0.1
SCAMP1-207ENST00000621999 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.43□□□□□ -0.1
SCAMP1-207ENST00000621999 ZSCAN22P10073 491 aaPredicted RBP14.43□□□□□ -0.1
SCAMP1-207ENST00000621999 TOP1P11387 765 aaKnown RBP14.43□□□□□ -0.1
SCAMP1-207ENST00000621999 CREBRFQ8IUR6 639 aa14.43□□□□□ -0.1
SCAMP1-207ENST00000621999 GTF3C6Q969F1 213 aa14.43□□□□□ -0.1
SCAMP1-207ENST00000621999 TMEM39BQ9GZU3 492 aa14.43□□□□□ -0.1
SCAMP1-207ENST00000621999 C15orf52Q6ZUT6 534 aaKnown RBP14.43□□□□□ -0.1
SCAMP1-207ENST00000621999 CCDC43Q96MW1 224 aaKnown RBP14.43□□□□□ -0.1
SCAMP1-207ENST00000621999 RTFDC1Q9BY42 306 aaPredicted RBP14.42□□□□□ -0.1
SCAMP1-207ENST00000621999 KANSL2Q9H9L4 492 aa14.42□□□□□ -0.1
SCAMP1-207ENST00000621999 KLRF2D3W0D1 207 aa14.42□□□□□ -0.1
SCAMP1-207ENST00000621999 RPS12P25398 132 aaKnown RBP14.42□□□□□ -0.1
SCAMP1-207ENST00000621999 PPP4CP60510 307 aa14.42□□□□□ -0.1
SCAMP1-207ENST00000621999 SLFN13Q68D06 897 aa14.42□□□□□ -0.1
SCAMP1-207ENST00000621999 KIFC2Q96AC6 838 aa14.42□□□□□ -0.1
SCAMP1-207ENST00000621999 TCRBV5S4A2TA0A5A2 114 aa14.42□□□□□ -0.1
SCAMP1-207ENST00000621999 IQCA1LA6NCM1 817 aa14.42□□□□□ -0.1
SCAMP1-207ENST00000621999 TTLL1O95922 423 aa14.42□□□□□ -0.1
SCAMP1-207ENST00000621999 LARGE1O95461 756 aa14.41□□□□□ -0.1
SCAMP1-207ENST00000621999 SCRN1Q12765 414 aa14.41□□□□□ -0.1
SCAMP1-207ENST00000621999 SEPT2Q15019 361 aa14.41□□□□□ -0.1
SCAMP1-207ENST00000621999 CCDC148Q8NFR7 591 aa14.41□□□□□ -0.1
SCAMP1-207ENST00000621999 GOPCQ9HD26 462 aa14.41□□□□□ -0.1
SCAMP1-207ENST00000621999 HACL1Q9UJ83 578 aa14.41□□□□□ -0.1
SCAMP1-207ENST00000621999 PCDHAC2Q9Y5I4 1007 aa14.41□□□□□ -0.1
SCAMP1-207ENST00000621999 CICQ96RK0 1608 aaPredicted RBP14.41□□□□□ -0.1
SCAMP1-207ENST00000621999 SIPA1L3O60292 1781 aaPredicted RBP14.41□□□□□ -0.1
SCAMP1-207ENST00000621999 SH2B2O14492 632 aaPredicted RBP14.41□□□□□ -0.1
SCAMP1-207ENST00000621999 MCM4P33991 863 aa14.41□□□□□ -0.1
SCAMP1-207ENST00000621999 CAVIN1Q6NZI2 390 aaKnown RBP14.41□□□□□ -0.1
SCAMP1-207ENST00000621999 ZDHHC15Q96MV8 337 aa14.41□□□□□ -0.1
SCAMP1-207ENST00000621999 WRNIP1Q96S55 665 aa14.41□□□□□ -0.1
SCAMP1-207ENST00000621999 RBM27Q9P2N5 1060 aaKnown RBP14.41□□□□□ -0.1
SCAMP1-207ENST00000621999 VIRMAQ69YN4 1812 aaKnown RBP14.41□□□□□ -0.1
SCAMP1-207ENST00000621999 TRAK2O60296 914 aa14.41□□□□□ -0.1
SCAMP1-207ENST00000621999 HDLBPQ00341 1268 aaKnown RBP14.41□□□□□ -0.1
SCAMP1-207ENST00000621999 USH1GQ495M9 461 aa14.41□□□□□ -0.1
SCAMP1-207ENST00000621999 TRIM75PA6NK02 468 aa14.4□□□□□ -0.1
SCAMP1-207ENST00000621999 PFKFB2O60825 505 aa14.4□□□□□ -0.1
SCAMP1-207ENST00000621999 DEXIO95424 95 aa14.4□□□□□ -0.1
SCAMP1-207ENST00000621999 FAM173BQ6P4H8 233 aa14.4□□□□□ -0.1
SCAMP1-207ENST00000621999 USP17L2Q6R6M4 530 aa14.4□□□□□ -0.1
SCAMP1-207ENST00000621999 MKRN3Q13064 507 aaKnown RBP14.4□□□□□ -0.1
SCAMP1-207ENST00000621999 KCTD1Q719H9 257 aa14.4□□□□□ -0.1
SCAMP1-207ENST00000621999 CDK5RAP3Q96JB5 506 aa14.4□□□□□ -0.1
SCAMP1-207ENST00000621999 SALL1Q9NSC2 1324 aa14.4□□□□□ -0.1
SCAMP1-207ENST00000621999 SPDYE2BA6NHP3 402 aa14.4□□□□□ -0.1
SCAMP1-207ENST00000621999 SPDYE6P0CI01 402 aa14.4□□□□□ -0.1
SCAMP1-207ENST00000621999 AKR1B1P15121 316 aa14.4□□□□□ -0.1
SCAMP1-207ENST00000621999 APOBEC3FQ8IUX4 373 aaKnown RBP14.4□□□□□ -0.1
SCAMP1-207ENST00000621999 DEFB129Q9H1M3 183 aa14.4□□□□□ -0.1
SCAMP1-207ENST00000621999 C6orf50Q9HD87 102 aa14.4□□□□□ -0.1
SCAMP1-207ENST00000621999 KCNJ14Q9UNX9 436 aa14.4□□□□□ -0.1
SCAMP1-207ENST00000621999 TMEM232C9JQI7 657 aa14.4□□□□□ -0.1
SCAMP1-207ENST00000621999 KINO60870 393 aaKnown RBP14.4□□□□□ -0.1
SCAMP1-207ENST00000621999 CCDC174Q6PII3 467 aa14.4□□□□□ -0.1
SCAMP1-207ENST00000621999 CLEC10AQ8IUN9 316 aa14.4□□□□□ -0.1
SCAMP1-207ENST00000621999 CEP95Q96GE4 821 aa14.4□□□□□ -0.1
SCAMP1-207ENST00000621999 LLPHQ9BRT6 129 aaKnown RBP14.4□□□□□ -0.1
SCAMP1-207ENST00000621999 AS3MTQ9HBK9 375 aa14.4□□□□□ -0.1
SCAMP1-207ENST00000621999 PTMAP06454 111 aaKnown RBP14.39□□□□□ -0.11
SCAMP1-207ENST00000621999 SLC16A2P36021 539 aa14.39□□□□□ -0.11
SCAMP1-207ENST00000621999 TXLNAP40222 546 aa14.39□□□□□ -0.11
SCAMP1-207ENST00000621999 EPS15P42566 896 aa14.39□□□□□ -0.11
SCAMP1-207ENST00000621999 MB21D2Q8IYB1 491 aaPredicted RBP14.39□□□□□ -0.11
SCAMP1-207ENST00000621999 SMARCC2Q8TAQ2 1214 aa14.39□□□□□ -0.11
SCAMP1-207ENST00000621999 HOMER2Q9NSB8 354 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms