RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 BRPF3Q9ULD4 1205 aa12.53□□□□□ -0.4
CPNE3-212ENST00000621783 TNKSO95271 1327 aa12.53□□□□□ -0.4
CPNE3-212ENST00000621783 GREB1LQ9C091 1923 aaPredicted RBP12.52□□□□□ -0.4
CPNE3-212ENST00000621783 ERICH2A1L162 156 aa12.52□□□□□ -0.41
CPNE3-212ENST00000621783 H7C1D1 291 aa12.52□□□□□ -0.41
CPNE3-212ENST00000621783 PFKFB2O60825 505 aa12.52□□□□□ -0.41
CPNE3-212ENST00000621783 PDIA3P30101 505 aaKnown RBP12.52□□□□□ -0.41
CPNE3-212ENST00000621783 DDIT3P35638 169 aa12.52□□□□□ -0.41
CPNE3-212ENST00000621783 LIFRP42702 1097 aa12.52□□□□□ -0.41
CPNE3-212ENST00000621783 TFAP4Q01664 338 aa12.52□□□□□ -0.41
CPNE3-212ENST00000621783 WTAPQ15007 396 aa12.52□□□□□ -0.41
CPNE3-212ENST00000621783 NFXL1Q6ZNB6 911 aa12.52□□□□□ -0.41
CPNE3-212ENST00000621783 SGMS1Q86VZ5 419 aa12.52□□□□□ -0.41
CPNE3-212ENST00000621783 IQCA1Q86XH1 822 aa12.52□□□□□ -0.41
CPNE3-212ENST00000621783 ENAHQ8N8S7 591 aaPredicted RBP12.52□□□□□ -0.41
CPNE3-212ENST00000621783 FAM151AQ8WW52 585 aa12.52□□□□□ -0.41
CPNE3-212ENST00000621783 ZNF274Q96GC6 653 aaPredicted RBP12.52□□□□□ -0.41
CPNE3-212ENST00000621783 INTS4Q96HW7 963 aaKnown RBP12.52□□□□□ -0.41
CPNE3-212ENST00000621783 DNAJC18Q9H819 358 aa12.52□□□□□ -0.41
CPNE3-212ENST00000621783 NAP1L2Q9ULW6 460 aaPredicted RBP12.52□□□□□ -0.41
CPNE3-212ENST00000621783 ASTN2O75129 1339 aaPredicted RBP12.52□□□□□ -0.41
CPNE3-212ENST00000621783 ZC3H4Q9UPT8 1303 aaKnown RBP12.52□□□□□ -0.41
CPNE3-212ENST00000621783 PLIN4Q96Q06 1357 aa12.52□□□□□ -0.41
CPNE3-212ENST00000621783 CCDC69A6NI79 296 aa12.51□□□□□ -0.41
CPNE3-212ENST00000621783 TSPY3P0CV98 308 aa12.51□□□□□ -0.41
CPNE3-212ENST00000621783 TSPY8P0CW00 308 aa12.51□□□□□ -0.41
CPNE3-212ENST00000621783 SLURP2P0DP57 97 aa12.51□□□□□ -0.41
CPNE3-212ENST00000621783 SHMT1P34896 483 aa12.51□□□□□ -0.41
CPNE3-212ENST00000621783 SCRN1Q12765 414 aa12.51□□□□□ -0.41
CPNE3-212ENST00000621783 APOA5Q6Q788 366 aa12.51□□□□□ -0.41
CPNE3-212ENST00000621783 FAM83AQ86UY5 434 aa12.51□□□□□ -0.41
CPNE3-212ENST00000621783 RAB11FIP4Q86YS3 637 aa12.51□□□□□ -0.41
CPNE3-212ENST00000621783 ZNF444Q8N0Y2 327 aaPredicted RBP12.51□□□□□ -0.41
CPNE3-212ENST00000621783 CRACR2BQ8N4Y2 399 aaPredicted RBP12.51□□□□□ -0.41
CPNE3-212ENST00000621783 CSRNP1Q96S65 589 aa12.51□□□□□ -0.41
CPNE3-212ENST00000621783 PI4KBQ9UBF8 816 aa12.51□□□□□ -0.41
CPNE3-212ENST00000621783 TAOK2Q9UL54 1235 aa12.51□□□□□ -0.41
CPNE3-212ENST00000621783 HPS5Q9UPZ3 1129 aa12.51□□□□□ -0.41
CPNE3-212ENST00000621783 NID2Q14112 1375 aa12.51□□□□□ -0.41
CPNE3-212ENST00000621783 FAM196BA6NMK8 535 aa12.5□□□□□ -0.41
CPNE3-212ENST00000621783 NMT2O60551 498 aa12.5□□□□□ -0.41
CPNE3-212ENST00000621783 LMOD1P29536 600 aaPredicted RBP12.5□□□□□ -0.41
CPNE3-212ENST00000621783 EPS15P42566 896 aa12.5□□□□□ -0.41
CPNE3-212ENST00000621783 TNNI2P48788 182 aa12.5□□□□□ -0.41
CPNE3-212ENST00000621783 TNFAIP1Q13829 316 aa12.5□□□□□ -0.41
CPNE3-212ENST00000621783 IFIT1BQ5T764 474 aaKnown RBP12.5□□□□□ -0.41
CPNE3-212ENST00000621783 TRIM34Q9BYJ4 488 aa12.5□□□□□ -0.41
CPNE3-212ENST00000621783 TMEM39BQ9GZU3 492 aa12.5□□□□□ -0.41
CPNE3-212ENST00000621783 IL17RBQ9NRM6 502 aa12.5□□□□□ -0.41
CPNE3-212ENST00000621783 TCP11L1Q9NUJ3 509 aa12.5□□□□□ -0.41
CPNE3-212ENST00000621783 HACL1Q9UJ83 578 aa12.5□□□□□ -0.41
CPNE3-212ENST00000621783 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.5□□□□□ -0.41
CPNE3-212ENST00000621783 AKR1B1P15121 316 aa12.49□□□□□ -0.41
CPNE3-212ENST00000621783 CCT2P78371 535 aaKnown RBP12.49□□□□□ -0.41
CPNE3-212ENST00000621783 METTL16Q86W50 562 aaKnown RBP12.49□□□□□ -0.41
CPNE3-212ENST00000621783 MICU3Q86XE3 530 aa12.49□□□□□ -0.41
CPNE3-212ENST00000621783 FOXP4Q8IVH2 680 aaPredicted RBP12.49□□□□□ -0.41
CPNE3-212ENST00000621783 CDAN1Q8IWY9 1227 aa12.49□□□□□ -0.41
CPNE3-212ENST00000621783 ZNF654Q8IZM8 581 aa12.49□□□□□ -0.41
CPNE3-212ENST00000621783 TMTC2Q8N394 836 aa12.49□□□□□ -0.41
CPNE3-212ENST00000621783 NEDD1Q8NHV4 660 aa12.49□□□□□ -0.41
CPNE3-212ENST00000621783 MYL10Q9BUA6 226 aa12.49□□□□□ -0.41
CPNE3-212ENST00000621783 NCOA5Q9HCD5 579 aaKnown RBP12.49□□□□□ -0.41
CPNE3-212ENST00000621783 PGAP2Q9UHJ9 254 aa12.49□□□□□ -0.41
CPNE3-212ENST00000621783 SMC3Q9UQE7 1217 aa12.49□□□□□ -0.41
CPNE3-212ENST00000621783 SLC12A7Q9Y666 1083 aa12.49□□□□□ -0.41
CPNE3-212ENST00000621783 GOLGA8AA7E2F4 631 aa12.48□□□□□ -0.41
CPNE3-212ENST00000621783 ZBTB43O43298 467 aa12.48□□□□□ -0.41
CPNE3-212ENST00000621783 DTNBO60941 627 aa12.48□□□□□ -0.41
CPNE3-212ENST00000621783 RXRAP19793 462 aa12.48□□□□□ -0.41
CPNE3-212ENST00000621783 METAP2P50579 478 aaKnown RBP eCLIP12.48□□□□□ -0.41
CPNE3-212ENST00000621783 RCAN1P53805 252 aa12.48□□□□□ -0.41
CPNE3-212ENST00000621783 RASA3Q14644 834 aa12.48□□□□□ -0.41
CPNE3-212ENST00000621783 CCDC178Q5BJE1 867 aa12.48□□□□□ -0.41
CPNE3-212ENST00000621783 ANGEL2Q5VTE6 544 aaKnown RBP12.48□□□□□ -0.41
CPNE3-212ENST00000621783 RCSD1Q6JBY9 416 aa12.48□□□□□ -0.41
CPNE3-212ENST00000621783 DPY19L2Q6NUT2 758 aa12.48□□□□□ -0.41
CPNE3-212ENST00000621783 APOBEC3FQ8IUX4 373 aaKnown RBP12.48□□□□□ -0.41
CPNE3-212ENST00000621783 L3MBTL3Q96JM7 780 aaPredicted RBP12.48□□□□□ -0.41
CPNE3-212ENST00000621783 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.48□□□□□ -0.41
CPNE3-212ENST00000621783 CWC22Q9HCG8 908 aaKnown RBP12.48□□□□□ -0.41
CPNE3-212ENST00000621783 ADARB2Q9NS39 739 aaKnown RBP12.48□□□□□ -0.41
CPNE3-212ENST00000621783 GGA3Q9NZ52 723 aa12.48□□□□□ -0.41
CPNE3-212ENST00000621783 CHMP5Q9NZZ3 219 aa12.48□□□□□ -0.41
CPNE3-212ENST00000621783 HERC5Q9UII4 1024 aaKnown RBP12.48□□□□□ -0.41
CPNE3-212ENST00000621783 CIZ1Q9ULV3 898 aaPredicted RBP12.48□□□□□ -0.41
CPNE3-212ENST00000621783 SCAF8Q9UPN6 1271 aaKnown RBP12.48□□□□□ -0.41
CPNE3-212ENST00000621783 GOLGB1Q14789 3259 aaKnown RBP12.48□□□□□ -0.41
CPNE3-212ENST00000621783 WDR90Q96KV7 1748 aa12.48□□□□□ -0.41
CPNE3-212ENST00000621783 IGKV6D-41A0A0C4DH26 115 aa12.47□□□□□ -0.41
CPNE3-212ENST00000621783 JAK2O60674 1132 aa12.47□□□□□ -0.41
CPNE3-212ENST00000621783 DDAH1O94760 285 aa12.47□□□□□ -0.41
CPNE3-212ENST00000621783 CTDNEP1O95476 244 aa12.47□□□□□ -0.41
CPNE3-212ENST00000621783 GJB2P29033 226 aa12.47□□□□□ -0.41
CPNE3-212ENST00000621783 HIRAP54198 1017 aaPredicted RBP12.47□□□□□ -0.41
CPNE3-212ENST00000621783 TATDN1Q6P1N9 297 aa12.47□□□□□ -0.41
CPNE3-212ENST00000621783 SYNE3Q6ZMZ3 975 aa12.47□□□□□ -0.41
CPNE3-212ENST00000621783 DGKHQ86XP1 1220 aa12.47□□□□□ -0.41
CPNE3-212ENST00000621783 CCDC144CPQ8IYA2 1237 aa12.47□□□□□ -0.41
CPNE3-212ENST00000621783 NSUN7Q8NE18 718 aaKnown RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms