RNA–Protein interactions for RNA: ENST00000621737.4

PTBP1-219, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 5

Gene PTBP1, Length 1,125 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-219ENST00000621737 RBBP6Q7Z6E9 1792 aaKnown RBP23.8■■□□□ 1.4
PTBP1-219ENST00000621737 TNRC18O15417 2968 aaPredicted RBP23.8■■□□□ 1.4
PTBP1-219ENST00000621737 PSMC4P43686 418 aa23.8■■□□□ 1.4
PTBP1-219ENST00000621737 SHROOM1Q2M3G4 852 aaPredicted RBP23.8■■□□□ 1.4
PTBP1-219ENST00000621737 TATDN1Q6P1N9 297 aa23.8■■□□□ 1.4
PTBP1-219ENST00000621737 LCORLQ8N3X6 602 aa23.8■■□□□ 1.4
PTBP1-219ENST00000621737 TRIM47Q96LD4 638 aa23.8■■□□□ 1.4
PTBP1-219ENST00000621737 CTGFP29279 349 aa23.79■■□□□ 1.4
PTBP1-219ENST00000621737 BACE1P56817 501 aa23.79■■□□□ 1.4
PTBP1-219ENST00000621737 PABPC4Q13310 644 aaKnown RBP eCLIP23.79■■□□□ 1.4
PTBP1-219ENST00000621737 MTMR2Q13614 643 aa23.79■■□□□ 1.4
PTBP1-219ENST00000621737 UBE3CQ15386 1083 aa23.78■■□□□ 1.4
PTBP1-219ENST00000621737 SLC9C1Q4G0N8 1177 aa23.78■■□□□ 1.4
PTBP1-219ENST00000621737 ZSCAN25Q6NSZ9 544 aa23.78■■□□□ 1.4
PTBP1-219ENST00000621737 ARMT1Q9H993 441 aa23.78■■□□□ 1.4
PTBP1-219ENST00000621737 MGAMO43451 1857 aa23.78■■□□□ 1.4
PTBP1-219ENST00000621737 ECM2O94769 699 aaPredicted RBP23.77■■□□□ 1.4
PTBP1-219ENST00000621737 FMNL1O95466 1100 aaPredicted RBP23.77■■□□□ 1.4
PTBP1-219ENST00000621737 POLR3DP05423 398 aaPredicted RBP23.77■■□□□ 1.4
PTBP1-219ENST00000621737 PLCD1P51178 756 aa23.77■■□□□ 1.4
PTBP1-219ENST00000621737 FCGRTP55899 365 aa23.77■■□□□ 1.4
PTBP1-219ENST00000621737 SDR42E1Q8WUS8 393 aa23.77■■□□□ 1.4
PTBP1-219ENST00000621737 CRBNQ96SW2 442 aa23.77■■□□□ 1.4
PTBP1-219ENST00000621737 DCP1AQ9NPI6 582 aaPredicted RBP23.77■■□□□ 1.4
PTBP1-219ENST00000621737 MCM9Q9NXL9 1143 aa23.77■■□□□ 1.4
PTBP1-219ENST00000621737 SRRDQ9UH36 339 aa23.77■■□□□ 1.4
PTBP1-219ENST00000621737 C19orf81C9J6K1 198 aa23.76■■□□□ 1.39
PTBP1-219ENST00000621737 MBD4O95243 580 aa23.76■■□□□ 1.39
PTBP1-219ENST00000621737 GH2P01242 217 aa23.76■■□□□ 1.39
PTBP1-219ENST00000621737 OSBPP22059 807 aa23.76■■□□□ 1.39
PTBP1-219ENST00000621737 HOXD10P28358 340 aa23.76■■□□□ 1.39
PTBP1-219ENST00000621737 SLFNL1Q499Z3 407 aa23.76■■□□□ 1.39
PTBP1-219ENST00000621737 NBPF11Q86T75 865 aa23.76■■□□□ 1.39
PTBP1-219ENST00000621737 ZNF333Q96JL9 665 aa23.76■■□□□ 1.39
PTBP1-219ENST00000621737 TMOD4Q9NZQ9 345 aa23.76■■□□□ 1.39
PTBP1-219ENST00000621737 USP17L10C9JJH3 530 aa23.75■■□□□ 1.39
PTBP1-219ENST00000621737 GABPAQ06546 454 aa23.75■■□□□ 1.39
PTBP1-219ENST00000621737 SHMT1P34896 483 aa23.74■■□□□ 1.39
PTBP1-219ENST00000621737 CERKLQ49MI3 558 aaPredicted RBP23.74■■□□□ 1.39
PTBP1-219ENST00000621737 ASCC2Q9H1I8 757 aaPredicted RBP23.74■■□□□ 1.39
PTBP1-219ENST00000621737 ATP8A2Q9NTI2 1148 aa23.74■■□□□ 1.39
PTBP1-219ENST00000621737 MYPNQ86TC9 1320 aa23.74■■□□□ 1.39
PTBP1-219ENST00000621737 CHGBP05060 677 aa23.73■■□□□ 1.39
PTBP1-219ENST00000621737 GCLCP48506 637 aaPredicted RBP23.73■■□□□ 1.39
PTBP1-219ENST00000621737 FAM110CQ1W6H9 321 aa23.73■■□□□ 1.39
PTBP1-219ENST00000621737 ABCB5Q2M3G0 1257 aa23.73■■□□□ 1.39
PTBP1-219ENST00000621737 TSHZ3Q63HK5 1081 aa23.73■■□□□ 1.39
PTBP1-219ENST00000621737 KBTBD3Q8NAB2 608 aa23.73■■□□□ 1.39
PTBP1-219ENST00000621737 TAOK2Q9UL54 1235 aa23.73■■□□□ 1.39
PTBP1-219ENST00000621737 PRKAB2O43741 272 aa23.72■■□□□ 1.39
PTBP1-219ENST00000621737 HOXA7P31268 230 aaPredicted RBP23.72■■□□□ 1.39
PTBP1-219ENST00000621737 ANKRD13CQ8N6S4 541 aa23.72■■□□□ 1.39
PTBP1-219ENST00000621737 SH3TC2Q8TF17 1288 aa23.72■■□□□ 1.39
PTBP1-219ENST00000621737 TTC41PQ6P2S7 1318 aa23.72■■□□□ 1.39
PTBP1-219ENST00000621737 BAZ2AQ9UIF9 1905 aaKnown RBP23.71■■□□□ 1.39
PTBP1-219ENST00000621737 POTEFA5A3E0 1075 aa23.71■■□□□ 1.39
PTBP1-219ENST00000621737 IRX3P78415 501 aaPredicted RBP23.71■■□□□ 1.39
PTBP1-219ENST00000621737 EVX2Q03828 476 aa23.71■■□□□ 1.39
PTBP1-219ENST00000621737 PRKCZQ05513 592 aa23.71■■□□□ 1.39
PTBP1-219ENST00000621737 RAB3GAP1Q15042 981 aa23.71■■□□□ 1.39
PTBP1-219ENST00000621737 RAET1EQ8TD07 263 aa23.71■■□□□ 1.39
PTBP1-219ENST00000621737 CABP5Q9NP86 173 aa23.71■■□□□ 1.39
PTBP1-219ENST00000621737 KIAA0100Q14667 2235 aaKnown RBP23.7■■□□□ 1.38
PTBP1-219ENST00000621737 CYP2D6P10635 497 aa23.7■■□□□ 1.38
PTBP1-219ENST00000621737 USP17L2Q6R6M4 530 aa23.7■■□□□ 1.38
PTBP1-219ENST00000621737 DDRGK1Q96HY6 314 aa23.7■■□□□ 1.38
PTBP1-219ENST00000621737 FEZ1Q99689 392 aa23.7■■□□□ 1.38
PTBP1-219ENST00000621737 PUS7LQ9H0K6 701 aaKnown RBP23.7■■□□□ 1.38
PTBP1-219ENST00000621737 SWAP70Q9UH65 585 aa23.7■■□□□ 1.38
PTBP1-219ENST00000621737 BRCA2P51587 3418 aa23.7■■□□□ 1.38
PTBP1-219ENST00000621737 MYH8P13535 1937 aa23.69■■□□□ 1.38
PTBP1-219ENST00000621737 TNPO2O14787 897 aaKnown RBP23.69■■□□□ 1.38
PTBP1-219ENST00000621737 ERC2O15083 957 aa23.69■■□□□ 1.38
PTBP1-219ENST00000621737 C12orf42Q96LP6 360 aa23.69■■□□□ 1.38
PTBP1-219ENST00000621737 TMEM106CQ9BVX2 250 aa23.69■■□□□ 1.38
PTBP1-219ENST00000621737 KIAA1683Q9H0B3 1180 aa23.69■■□□□ 1.38
PTBP1-219ENST00000621737 EMILIN3Q9NT22 766 aa23.69■■□□□ 1.38
PTBP1-219ENST00000621737 PDE4DIPQ5VU43 2346 aa23.68■■□□□ 1.38
PTBP1-219ENST00000621737 GRK4P32298 578 aa23.68■■□□□ 1.38
PTBP1-219ENST00000621737 HDAC1Q13547 482 aaPredicted RBP23.68■■□□□ 1.38
PTBP1-219ENST00000621737 AAMPQ13685 434 aa23.68■■□□□ 1.38
PTBP1-219ENST00000621737 AMOTL1Q8IY63 956 aa23.68■■□□□ 1.38
PTBP1-219ENST00000621737 MORF4L1Q9UBU8 362 aa23.68■■□□□ 1.38
PTBP1-219ENST00000621737 SLC4A4Q9Y6R1 1079 aa23.68■■□□□ 1.38
PTBP1-219ENST00000621737 GLRX3O76003 335 aaKnown RBP23.67■■□□□ 1.38
PTBP1-219ENST00000621737 ZFYP08048 801 aaPredicted RBP23.67■■□□□ 1.38
PTBP1-219ENST00000621737 GUCY1A2P33402 732 aa23.67■■□□□ 1.38
PTBP1-219ENST00000621737 USP14P54578 494 aa23.67■■□□□ 1.38
PTBP1-219ENST00000621737 HERVK_113P62684 666 aa23.67■■□□□ 1.38
PTBP1-219ENST00000621737 SLC44A5Q8NCS7 719 aa23.67■■□□□ 1.38
PTBP1-219ENST00000621737 PI4K2BQ8TCG2 481 aa23.67■■□□□ 1.38
PTBP1-219ENST00000621737 OTUD7AQ8TE49 926 aaPredicted RBP23.67■■□□□ 1.38
PTBP1-219ENST00000621737 APPBP2Q92624 585 aa23.67■■□□□ 1.38
PTBP1-219ENST00000621737 GABRQQ9UN88 632 aa23.67■■□□□ 1.38
PTBP1-219ENST00000621737 RNF113AO15541 343 aaKnown RBP23.66■■□□□ 1.38
PTBP1-219ENST00000621737 MX1P20591 662 aa23.66■■□□□ 1.38
PTBP1-219ENST00000621737 ZYXQ15942 572 aaKnown RBP23.66■■□□□ 1.38
PTBP1-219ENST00000621737 LRRFIP1Q32MZ4 808 aaKnown RBP23.66■■□□□ 1.38
PTBP1-219ENST00000621737 C12orf60Q5U649 245 aa23.66■■□□□ 1.38
PTBP1-219ENST00000621737 SLAIN1Q8ND83 568 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms