RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 KANK3Q6NY19 840 aa22.32■■□□□ 1.16
PDLIM3-212ENST00000620787 ZCRB1Q8TBF4 217 aaKnown RBP22.32■■□□□ 1.16
PDLIM3-212ENST00000620787 ANKZF1Q9H8Y5 726 aa22.32■■□□□ 1.16
PDLIM3-212ENST00000620787 MYH8P13535 1937 aa22.32■■□□□ 1.16
PDLIM3-212ENST00000620787 PBX1P40424 430 aa22.31■■□□□ 1.16
PDLIM3-212ENST00000620787 SLC20A2Q08357 652 aa22.31■■□□□ 1.16
PDLIM3-212ENST00000620787 RBL2Q08999 1139 aa22.31■■□□□ 1.16
PDLIM3-212ENST00000620787 NR5A1Q13285 461 aa22.31■■□□□ 1.16
PDLIM3-212ENST00000620787 TTLL11Q8NHH1 800 aa22.31■■□□□ 1.16
PDLIM3-212ENST00000620787 TRERF1Q96PN7 1200 aa22.31■■□□□ 1.16
PDLIM3-212ENST00000620787 ZSWIM4Q9H7M6 989 aa22.31■■□□□ 1.16
PDLIM3-212ENST00000620787 ITGA6P23229 1130 aa22.31■■□□□ 1.16
PDLIM3-212ENST00000620787 GYS2P54840 703 aa22.31■■□□□ 1.16
PDLIM3-212ENST00000620787 AIDAQ96BJ3 306 aa22.31■■□□□ 1.16
PDLIM3-212ENST00000620787 NAA15Q9BXJ9 866 aaKnown RBP22.31■■□□□ 1.16
PDLIM3-212ENST00000620787 GREM2Q9H772 168 aa22.31■■□□□ 1.16
PDLIM3-212ENST00000620787 SHANK3Q9BYB0 1731 aa22.3■■□□□ 1.16
PDLIM3-212ENST00000620787 TNS3Q68CZ2 1445 aa22.3■■□□□ 1.16
PDLIM3-212ENST00000620787 PHKA1P46020 1223 aa22.3■■□□□ 1.16
PDLIM3-212ENST00000620787 CSRNP2Q9H175 543 aa22.3■■□□□ 1.16
PDLIM3-212ENST00000620787 TBC1D2BQ9UPU7 963 aa22.3■■□□□ 1.16
PDLIM3-212ENST00000620787 ZNF330Q9Y3S2 320 aaPredicted RBP22.3■■□□□ 1.16
PDLIM3-212ENST00000620787 ARAP2Q8WZ64 1704 aa22.3■■□□□ 1.16
PDLIM3-212ENST00000620787 ARID4AP29374 1257 aaPredicted RBP22.3■■□□□ 1.16
PDLIM3-212ENST00000620787 IFNL3Q8IZI9 196 aa22.3■■□□□ 1.16
PDLIM3-212ENST00000620787 IGSF22Q8N9C0 903 aa22.3■■□□□ 1.16
PDLIM3-212ENST00000620787 HNRNPLLQ8WVV9 542 aaKnown RBP22.3■■□□□ 1.16
PDLIM3-212ENST00000620787 EXOC4Q96A65 974 aa22.3■■□□□ 1.16
PDLIM3-212ENST00000620787 PSD3Q9NYI0 1048 aa22.3■■□□□ 1.16
PDLIM3-212ENST00000620787 CDC23Q9UJX2 597 aa22.3■■□□□ 1.16
PDLIM3-212ENST00000620787 CDHR2Q9BYE9 1310 aa22.29■■□□□ 1.16
PDLIM3-212ENST00000620787 PATL2C9JE40 543 aaKnown RBP22.29■■□□□ 1.16
PDLIM3-212ENST00000620787 RTN1Q16799 776 aa22.29■■□□□ 1.16
PDLIM3-212ENST00000620787 SPATA1Q5VX52 437 aa22.29■■□□□ 1.16
PDLIM3-212ENST00000620787 TRIM22Q8IYM9 498 aa22.29■■□□□ 1.16
PDLIM3-212ENST00000620787 ADD3Q9UEY8 706 aaKnown RBP22.29■■□□□ 1.16
PDLIM3-212ENST00000620787 ADAM21Q9UKJ8 722 aa22.29■■□□□ 1.16
PDLIM3-212ENST00000620787 CD44P16070 742 aaKnown RBP22.28■■□□□ 1.16
PDLIM3-212ENST00000620787 CUL4BQ13620 913 aa22.28■■□□□ 1.16
PDLIM3-212ENST00000620787 PPFIBP1Q86W92 1011 aa22.28■■□□□ 1.16
PDLIM3-212ENST00000620787 OXER1Q8TDS5 423 aa22.28■■□□□ 1.16
PDLIM3-212ENST00000620787 NAPBQ9H115 298 aa22.28■■□□□ 1.16
PDLIM3-212ENST00000620787 CNNM1Q9NRU3 951 aa22.28■■□□□ 1.16
PDLIM3-212ENST00000620787 PUF60Q9UHX1 559 aaKnown RBP22.28■■□□□ 1.16
PDLIM3-212ENST00000620787 RAB21Q9UL25 225 aa22.28■■□□□ 1.16
PDLIM3-212ENST00000620787 SYNRGQ9UMZ2 1314 aa22.28■■□□□ 1.16
PDLIM3-212ENST00000620787 KIF5CO60282 957 aa22.28■■□□□ 1.16
PDLIM3-212ENST00000620787 USP5P45974 858 aa22.28■■□□□ 1.16
PDLIM3-212ENST00000620787 NKX1-1Q15270 411 aaPredicted RBP22.28■■□□□ 1.16
PDLIM3-212ENST00000620787 CT47A1Q5JQC4 288 aaPredicted RBP22.28■■□□□ 1.16
PDLIM3-212ENST00000620787 BEND6Q5SZJ8 279 aaPredicted RBP22.28■■□□□ 1.16
PDLIM3-212ENST00000620787 AKNAD1Q5T1N1 836 aa22.28■■□□□ 1.16
PDLIM3-212ENST00000620787 CDKAL1Q5VV42 579 aa22.28■■□□□ 1.16
PDLIM3-212ENST00000620787 RASGRP2Q7LDG7 609 aa22.28■■□□□ 1.16
PDLIM3-212ENST00000620787 CEP112Q8N8E3 955 aa22.28■■□□□ 1.16
PDLIM3-212ENST00000620787 MSANTD4Q8NCY6 345 aa22.28■■□□□ 1.16
PDLIM3-212ENST00000620787 CNNM2Q9H8M5 875 aa22.28■■□□□ 1.16
PDLIM3-212ENST00000620787 CEP131Q9UPN4 1083 aa22.28■■□□□ 1.16
PDLIM3-212ENST00000620787 WDR17Q8IZU2 1322 aa22.28■■□□□ 1.16
PDLIM3-212ENST00000620787 A0A087X0B3 334 aa22.27■■□□□ 1.16
PDLIM3-212ENST00000620787 MFAP3LO75121 409 aa22.27■■□□□ 1.16
PDLIM3-212ENST00000620787 DEXIO95424 95 aa22.27■■□□□ 1.16
PDLIM3-212ENST00000620787 ZSCAN26Q16670 478 aa22.27■■□□□ 1.16
PDLIM3-212ENST00000620787 PNKPQ96T60 521 aa22.27■■□□□ 1.16
PDLIM3-212ENST00000620787 STRN4Q9NRL3 753 aa22.27■■□□□ 1.16
PDLIM3-212ENST00000620787 CRACR2BQ8N4Y2 399 aaPredicted RBP22.27■■□□□ 1.16
PDLIM3-212ENST00000620787 CPLX3Q8WVH0 158 aa22.27■■□□□ 1.16
PDLIM3-212ENST00000620787 AK7Q96M32 723 aa22.27■■□□□ 1.16
PDLIM3-212ENST00000620787 KRT23Q9C075 422 aa22.27■■□□□ 1.16
PDLIM3-212ENST00000620787 MBD4O95243 580 aa22.26■■□□□ 1.15
PDLIM3-212ENST00000620787 ATP2B1P20020 1258 aa22.26■■□□□ 1.15
PDLIM3-212ENST00000620787 KIF6Q6ZMV9 814 aa22.26■■□□□ 1.15
PDLIM3-212ENST00000620787 CMTR1Q8N1G2 835 aaKnown RBP22.26■■□□□ 1.15
PDLIM3-212ENST00000620787 TSPYL1Q9H0U9 437 aa22.26■■□□□ 1.15
PDLIM3-212ENST00000620787 FEZ2Q9UHY8 353 aaPredicted RBP22.26■■□□□ 1.15
PDLIM3-212ENST00000620787 BCORQ6W2J9 1755 aa22.26■■□□□ 1.15
PDLIM3-212ENST00000620787 TOGARAM1Q9Y4F4 1720 aa22.26■■□□□ 1.15
PDLIM3-212ENST00000620787 ANKRD18BA2A2Z9 1011 aa22.26■■□□□ 1.15
PDLIM3-212ENST00000620787 POTEB2H3BUK9 544 aa22.26■■□□□ 1.15
PDLIM3-212ENST00000620787 PDE8BO95263 885 aa22.26■■□□□ 1.15
PDLIM3-212ENST00000620787 STX17P56962 302 aa22.26■■□□□ 1.15
PDLIM3-212ENST00000620787 ZNF569Q5MCW4 686 aa22.26■■□□□ 1.15
PDLIM3-212ENST00000620787 CCDC82Q8N4S0 544 aa22.26■■□□□ 1.15
PDLIM3-212ENST00000620787 ZKSCAN3Q9BRR0 538 aa22.26■■□□□ 1.15
PDLIM3-212ENST00000620787 AATFQ9NY61 560 aaKnown RBP eCLIP22.26■■□□□ 1.15
PDLIM3-212ENST00000620787 ANKRD36CQ5JPF3 1778 aa22.25■■□□□ 1.15
PDLIM3-212ENST00000620787 UQCRFS1P1P0C7P4 283 aa22.25■■□□□ 1.15
PDLIM3-212ENST00000620787 FECHP22830 423 aa22.25■■□□□ 1.15
PDLIM3-212ENST00000620787 CTSWP56202 376 aa22.25■■□□□ 1.15
PDLIM3-212ENST00000620787 KLHL10Q6JEL2 608 aa22.25■■□□□ 1.15
PDLIM3-212ENST00000620787 SH3RF1Q7Z6J0 888 aa22.25■■□□□ 1.15
PDLIM3-212ENST00000620787 CABP5Q9NP86 173 aa22.25■■□□□ 1.15
PDLIM3-212ENST00000620787 MYH2Q9UKX2 1941 aa22.25■■□□□ 1.15
PDLIM3-212ENST00000620787 TUBB2AQ13885 445 aa22.25■■□□□ 1.15
PDLIM3-212ENST00000620787 WTAPQ15007 396 aa22.25■■□□□ 1.15
PDLIM3-212ENST00000620787 MFSD6Q6ZSS7 791 aa22.25■■□□□ 1.15
PDLIM3-212ENST00000620787 TUBB2BQ9BVA1 445 aa22.25■■□□□ 1.15
PDLIM3-212ENST00000620787 PDE11AQ9HCR9 933 aa22.25■■□□□ 1.15
PDLIM3-212ENST00000620787 BCL9LQ86UU0 1499 aa22.25■■□□□ 1.15
PDLIM3-212ENST00000620787 GSG1L2A8MUP6 293 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms