RNA–Protein interactions for RNA: ENST00000620770.1

MUC1-229, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-229ENST00000620770 VGLL4Q14135 290 aa16.05■□□□□ 0.16
MUC1-229ENST00000620770 MCOLN1Q9GZU1 580 aa16.05■□□□□ 0.16
MUC1-229ENST00000620770 ELP3Q9H9T3 547 aa16.05■□□□□ 0.16
MUC1-229ENST00000620770 TOMM22Q9NS69 142 aa16.05■□□□□ 0.16
MUC1-229ENST00000620770 CTNNA3Q9UI47 895 aa16.05■□□□□ 0.16
MUC1-229ENST00000620770 CSADQ9Y600 493 aa16.05■□□□□ 0.16
MUC1-229ENST00000620770 U3KPZ7 1027 aaPredicted RBP16.05■□□□□ 0.16
MUC1-229ENST00000620770 ROBO3Q96MS0 1386 aa16.04■□□□□ 0.16
MUC1-229ENST00000620770 PHF20L1A8MW92 1017 aa16.04■□□□□ 0.16
MUC1-229ENST00000620770 ZNF213O14771 459 aa16.04■□□□□ 0.16
MUC1-229ENST00000620770 CDK8P49336 464 aa16.04■□□□□ 0.16
MUC1-229ENST00000620770 MAP3K10Q02779 954 aa16.04■□□□□ 0.16
MUC1-229ENST00000620770 GABPAQ06546 454 aa16.04■□□□□ 0.16
MUC1-229ENST00000620770 SREBF2Q12772 1141 aa16.04■□□□□ 0.16
MUC1-229ENST00000620770 DGKZQ13574 1117 aa16.04■□□□□ 0.16
MUC1-229ENST00000620770 RRP1BQ14684 758 aaKnown RBP16.04■□□□□ 0.16
MUC1-229ENST00000620770 IMMTQ16891 758 aaKnown RBP16.04■□□□□ 0.16
MUC1-229ENST00000620770 SHROOM1Q2M3G4 852 aaPredicted RBP16.04■□□□□ 0.16
MUC1-229ENST00000620770 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.04■□□□□ 0.16
MUC1-229ENST00000620770 C16orf86Q6ZW13 317 aa16.04■□□□□ 0.16
MUC1-229ENST00000620770 METTL16Q86W50 562 aaKnown RBP16.04■□□□□ 0.16
MUC1-229ENST00000620770 TBC1D10CQ8IV04 446 aa16.04■□□□□ 0.16
MUC1-229ENST00000620770 ANKRD13AQ8IZ07 590 aa16.04■□□□□ 0.16
MUC1-229ENST00000620770 MKNK2Q9HBH9 465 aa16.04■□□□□ 0.16
MUC1-229ENST00000620770 INCENPQ9NQS7 918 aa16.04■□□□□ 0.16
MUC1-229ENST00000620770 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.04■□□□□ 0.16
MUC1-229ENST00000620770 SWAP70Q9UH65 585 aa16.04■□□□□ 0.16
MUC1-229ENST00000620770 MPHOSPH10O00566 681 aaKnown RBP16.03■□□□□ 0.16
MUC1-229ENST00000620770 REC8O95072 547 aa16.03■□□□□ 0.16
MUC1-229ENST00000620770 MKRN3Q13064 507 aaKnown RBP16.03■□□□□ 0.16
MUC1-229ENST00000620770 MAP3K11Q16584 847 aa16.03■□□□□ 0.16
MUC1-229ENST00000620770 CERKLQ49MI3 558 aaPredicted RBP16.03■□□□□ 0.16
MUC1-229ENST00000620770 RRP12Q5JTH9 1297 aaKnown RBP16.03■□□□□ 0.16
MUC1-229ENST00000620770 MAP4K1Q92918 833 aa16.03■□□□□ 0.16
MUC1-229ENST00000620770 NBPF3Q9H094 633 aa16.03■□□□□ 0.16
MUC1-229ENST00000620770 ZNF112Q9UJU3 913 aa16.03■□□□□ 0.16
MUC1-229ENST00000620770 SNCAIPQ9Y6H5 919 aa16.03■□□□□ 0.16
MUC1-229ENST00000620770 CCDC85CA6NKD9 419 aa16.02■□□□□ 0.16
MUC1-229ENST00000620770 PDE4BQ07343 736 aa16.02■□□□□ 0.16
MUC1-229ENST00000620770 LDLRAD1Q5T700 205 aa16.02■□□□□ 0.16
MUC1-229ENST00000620770 CCDC84Q86UT8 332 aaPredicted RBP16.02■□□□□ 0.16
MUC1-229ENST00000620770 SCYL3Q8IZE3 742 aa16.02■□□□□ 0.16
MUC1-229ENST00000620770 CNKSR2Q8WXI2 1034 aa16.02■□□□□ 0.16
MUC1-229ENST00000620770 SLC10A4Q96EP9 437 aa16.02■□□□□ 0.16
MUC1-229ENST00000620770 PICK1Q9NRD5 415 aa16.02■□□□□ 0.16
MUC1-229ENST00000620770 LAMA4Q16363 1823 aa16.01■□□□□ 0.15
MUC1-229ENST00000620770 CTNND1O60716 968 aaKnown RBP16.01■□□□□ 0.15
MUC1-229ENST00000620770 GH2P01242 217 aa16.01■□□□□ 0.15
MUC1-229ENST00000620770 AKR1B1P15121 316 aa16.01■□□□□ 0.15
MUC1-229ENST00000620770 CAP2P40123 477 aa16.01■□□□□ 0.15
MUC1-229ENST00000620770 JAG1P78504 1218 aa16.01■□□□□ 0.15
MUC1-229ENST00000620770 ABCB5Q2M3G0 1257 aa16.01■□□□□ 0.15
MUC1-229ENST00000620770 C8orf34Q49A92 452 aa16.01■□□□□ 0.15
MUC1-229ENST00000620770 TATDN1Q6P1N9 297 aa16.01■□□□□ 0.15
MUC1-229ENST00000620770 ANAPC4Q9UJX5 808 aa16.01■□□□□ 0.15
MUC1-229ENST00000620770 TACC3Q9Y6A5 838 aa16.01■□□□□ 0.15
MUC1-229ENST00000620770 NEDD4P46934 1319 aa16■□□□□ 0.15
MUC1-229ENST00000620770 DOCK1Q14185 1865 aa16■□□□□ 0.15
MUC1-229ENST00000620770 UNCXA6NJT0 531 aa16■□□□□ 0.15
MUC1-229ENST00000620770 SLC27A2O14975 620 aa16■□□□□ 0.15
MUC1-229ENST00000620770 CYP21A2P08686 494 aa16■□□□□ 0.15
MUC1-229ENST00000620770 RASA1P20936 1047 aa16■□□□□ 0.15
MUC1-229ENST00000620770 RAB3GAP1Q15042 981 aa16■□□□□ 0.15
MUC1-229ENST00000620770 FAM47AQ5JRC9 791 aa16■□□□□ 0.15
MUC1-229ENST00000620770 NOL9Q5SY16 702 aaKnown RBP16■□□□□ 0.15
MUC1-229ENST00000620770 AKNAD1Q5T1N1 836 aa16■□□□□ 0.15
MUC1-229ENST00000620770 SPRYD7Q5W111 196 aa16■□□□□ 0.15
MUC1-229ENST00000620770 MFSD6Q6ZSS7 791 aa16■□□□□ 0.15
MUC1-229ENST00000620770 ZNF444Q8N0Y2 327 aaPredicted RBP16■□□□□ 0.15
MUC1-229ENST00000620770 OTUD5Q96G74 571 aa16■□□□□ 0.15
MUC1-229ENST00000620770 ZNF287Q9HBT7 754 aa16■□□□□ 0.15
MUC1-229ENST00000620770 CABP5Q9NP86 173 aa16■□□□□ 0.15
MUC1-229ENST00000620770 ZBTB21Q9ULJ3 1066 aa16■□□□□ 0.15
MUC1-229ENST00000620770 TAF6LQ9Y6J9 622 aa16■□□□□ 0.15
MUC1-229ENST00000620770 RANBP6O60518 1105 aaKnown RBP15.99■□□□□ 0.15
MUC1-229ENST00000620770 ZBTB48P10074 688 aaPredicted RBP15.99■□□□□ 0.15
MUC1-229ENST00000620770 TM4SF4P48230 202 aa15.99■□□□□ 0.15
MUC1-229ENST00000620770 CREB3L3Q68CJ9 461 aa15.99■□□□□ 0.15
MUC1-229ENST00000620770 CLEC10AQ8IUN9 316 aa15.99■□□□□ 0.15
MUC1-229ENST00000620770 STAG1Q8WVM7 1258 aa15.99■□□□□ 0.15
MUC1-229ENST00000620770 OPTNQ96CV9 577 aa15.99■□□□□ 0.15
MUC1-229ENST00000620770 RNF41Q9H4P4 317 aaPredicted RBP15.99■□□□□ 0.15
MUC1-229ENST00000620770 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.99■□□□□ 0.15
MUC1-229ENST00000620770 MYH8P13535 1937 aa15.99■□□□□ 0.15
MUC1-229ENST00000620770 ATAD5Q96QE3 1844 aa15.98■□□□□ 0.15
MUC1-229ENST00000620770 MANSC4A6NHS7 340 aaPredicted RBP15.98■□□□□ 0.15
MUC1-229ENST00000620770 ASNSP08243 561 aa15.98■□□□□ 0.15
MUC1-229ENST00000620770 TSPY3P0CV98 308 aa15.98■□□□□ 0.15
MUC1-229ENST00000620770 TSPY8P0CW00 308 aa15.98■□□□□ 0.15
MUC1-229ENST00000620770 PTPRAP18433 802 aa15.98■□□□□ 0.15
MUC1-229ENST00000620770 SEPT2Q15019 361 aa15.98■□□□□ 0.15
MUC1-229ENST00000620770 CTU1Q7Z7A3 348 aaKnown RBP15.98■□□□□ 0.15
MUC1-229ENST00000620770 WNK4Q96J92 1243 aa15.98■□□□□ 0.15
MUC1-229ENST00000620770 TAOK2Q9UL54 1235 aa15.98■□□□□ 0.15
MUC1-229ENST00000620770 ZHX2Q9Y6X8 837 aa15.98■□□□□ 0.15
MUC1-229ENST00000620770 SPDYE5A6NIY4 337 aa15.97■□□□□ 0.15
MUC1-229ENST00000620770 TSPY2A6NKD2 308 aa15.97■□□□□ 0.15
MUC1-229ENST00000620770 B4E1Z4 1266 aa15.97■□□□□ 0.15
MUC1-229ENST00000620770 ORC4O43929 436 aa15.97■□□□□ 0.15
MUC1-229ENST00000620770 SEC24BO95487 1268 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms