RNA–Protein interactions for RNA: ENST00000620536.4

ATXN3-252, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 1,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-252ENST00000620536 GABRQQ9UN88 632 aa29.15■■■□□ 2.26
ATXN3-252ENST00000620536 MAGEB6P1A0A0J9YX57 407 aa29.14■■■□□ 2.26
ATXN3-252ENST00000620536 UBXN2AP68543 259 aa29.14■■■□□ 2.26
ATXN3-252ENST00000620536 FAM110CQ1W6H9 321 aa29.14■■■□□ 2.26
ATXN3-252ENST00000620536 TTC6Q86TZ1 520 aa29.14■■■□□ 2.26
ATXN3-252ENST00000620536 SLAIN1Q8ND83 568 aa29.14■■■□□ 2.26
ATXN3-252ENST00000620536 ASCC2Q9H1I8 757 aaPredicted RBP29.14■■■□□ 2.26
ATXN3-252ENST00000620536 ZBTB21Q9ULJ3 1066 aa29.14■■■□□ 2.26
ATXN3-252ENST00000620536 C19orf81C9J6K1 198 aa29.13■■■□□ 2.25
ATXN3-252ENST00000620536 USP17L10C9JJH3 530 aa29.13■■■□□ 2.25
ATXN3-252ENST00000620536 GOLIM4O00461 696 aa29.13■■■□□ 2.25
ATXN3-252ENST00000620536 MTFR1Q15390 333 aa29.13■■■□□ 2.25
ATXN3-252ENST00000620536 COA7Q96BR5 231 aa29.13■■■□□ 2.25
ATXN3-252ENST00000620536 SERPINB13Q9UIV8 391 aa29.13■■■□□ 2.25
ATXN3-252ENST00000620536 LOC285556D6RIA3 1793 aa29.13■■■□□ 2.25
ATXN3-252ENST00000620536 PDE6AP16499 860 aa29.12■■■□□ 2.25
ATXN3-252ENST00000620536 FLT3LGP49771 235 aa29.12■■■□□ 2.25
ATXN3-252ENST00000620536 C20orf194Q5TEA3 1177 aa29.12■■■□□ 2.25
ATXN3-252ENST00000620536 RIOK1Q9BRS2 568 aaKnown RBP29.12■■■□□ 2.25
ATXN3-252ENST00000620536 EHD4Q9H223 541 aa29.12■■■□□ 2.25
ATXN3-252ENST00000620536 PDE4DIPQ5VU43 2346 aa29.12■■■□□ 2.25
ATXN3-252ENST00000620536 ADCY3O60266 1144 aa29.11■■■□□ 2.25
ATXN3-252ENST00000620536 IRX3P78415 501 aaPredicted RBP29.11■■■□□ 2.25
ATXN3-252ENST00000620536 SHROOM1Q2M3G4 852 aaPredicted RBP29.11■■■□□ 2.25
ATXN3-252ENST00000620536 MGAMO43451 1857 aa29.1■■■□□ 2.25
ATXN3-252ENST00000620536 CCL5P13501 91 aa29.1■■■□□ 2.25
ATXN3-252ENST00000620536 TATDN1Q6P1N9 297 aa29.1■■■□□ 2.25
ATXN3-252ENST00000620536 NKX2-3Q8TAU0 364 aa29.1■■■□□ 2.25
ATXN3-252ENST00000620536 CRNKL1Q9BZJ0 848 aaKnown RBP29.1■■■□□ 2.25
ATXN3-252ENST00000620536 ZNF532Q9HCE3 1301 aa29.1■■■□□ 2.25
ATXN3-252ENST00000620536 GH2P01242 217 aa29.09■■■□□ 2.25
ATXN3-252ENST00000620536 POLR3DP05423 398 aaPredicted RBP29.09■■■□□ 2.25
ATXN3-252ENST00000620536 RNF208Q9H0X6 261 aa29.09■■■□□ 2.25
ATXN3-252ENST00000620536 BRCA2P51587 3418 aa29.08■■■□□ 2.25
ATXN3-252ENST00000620536 SLC34A2O95436 690 aa29.08■■■□□ 2.25
ATXN3-252ENST00000620536 HOXA7P31268 230 aaPredicted RBP29.08■■■□□ 2.25
ATXN3-252ENST00000620536 IRF5Q13568 498 aa29.08■■■□□ 2.25
ATXN3-252ENST00000620536 PXYLP1Q8TE99 480 aa29.08■■■□□ 2.25
ATXN3-252ENST00000620536 PAG1Q9NWQ8 432 aa29.08■■■□□ 2.25
ATXN3-252ENST00000620536 TAOK2Q9UL54 1235 aa29.08■■■□□ 2.25
ATXN3-252ENST00000620536 ATP5JP18859 108 aa29.07■■■□□ 2.24
ATXN3-252ENST00000620536 CERKLQ49MI3 558 aaPredicted RBP29.07■■■□□ 2.24
ATXN3-252ENST00000620536 LRRCC1Q9C099 1032 aa29.07■■■□□ 2.24
ATXN3-252ENST00000620536 BOLA2Q9H3K6 86 aa29.07■■■□□ 2.24
ATXN3-252ENST00000620536 MYH1P12882 1939 aa29.06■■■□□ 2.24
ATXN3-252ENST00000620536 GJB1P08034 283 aa29.06■■■□□ 2.24
ATXN3-252ENST00000620536 ELNP15502 786 aa29.06■■■□□ 2.24
ATXN3-252ENST00000620536 USP17L2Q6R6M4 530 aa29.06■■■□□ 2.24
ATXN3-252ENST00000620536 EDC3Q96F86 508 aaKnown RBP29.06■■■□□ 2.24
ATXN3-252ENST00000620536 PLCD1P51178 756 aa29.05■■■□□ 2.24
ATXN3-252ENST00000620536 RAB3GAP1Q15042 981 aa29.05■■■□□ 2.24
ATXN3-252ENST00000620536 ABCB5Q2M3G0 1257 aa29.05■■■□□ 2.24
ATXN3-252ENST00000620536 P2RX7Q99572 595 aaKnown RBP29.05■■■□□ 2.24
ATXN3-252ENST00000620536 FEZ1Q99689 392 aa29.05■■■□□ 2.24
ATXN3-252ENST00000620536 DDX24Q9GZR7 859 aaKnown RBP eCLIP29.05■■■□□ 2.24
ATXN3-252ENST00000620536 CABP5Q9NP86 173 aa29.05■■■□□ 2.24
ATXN3-252ENST00000620536 MKI67P46013 3256 aaKnown RBP29.05■■■□□ 2.24
ATXN3-252ENST00000620536 KIAA0100Q14667 2235 aaKnown RBP29.04■■■□□ 2.24
ATXN3-252ENST00000620536 TCRBV5S4A2TA0A5A2 114 aa29.04■■■□□ 2.24
ATXN3-252ENST00000620536 GJA8P48165 433 aa29.04■■■□□ 2.24
ATXN3-252ENST00000620536 GCC1Q96CN9 775 aa29.04■■■□□ 2.24
ATXN3-252ENST00000620536 MCM9Q9NXL9 1143 aa29.04■■■□□ 2.24
ATXN3-252ENST00000620536 MORF4L1Q9UBU8 362 aa29.04■■■□□ 2.24
ATXN3-252ENST00000620536 INHAP05111 366 aa29.03■■■□□ 2.24
ATXN3-252ENST00000620536 HERVK_113P62684 666 aa29.03■■■□□ 2.24
ATXN3-252ENST00000620536 SHISA4Q96DD7 197 aa29.03■■■□□ 2.24
ATXN3-252ENST00000620536 HAUS7Q99871 368 aa29.03■■■□□ 2.24
ATXN3-252ENST00000620536 UNC93B1Q9H1C4 597 aa29.03■■■□□ 2.24
ATXN3-252ENST00000620536 EMILIN3Q9NT22 766 aa29.03■■■□□ 2.24
ATXN3-252ENST00000620536 LCORLQ8N3X6 602 aa29.02■■■□□ 2.24
ATXN3-252ENST00000620536 GPRC5AQ8NFJ5 357 aa29.02■■■□□ 2.24
ATXN3-252ENST00000620536 SHMT1P34896 483 aa29.01■■■□□ 2.23
ATXN3-252ENST00000620536 USP14P54578 494 aa29.01■■■□□ 2.23
ATXN3-252ENST00000620536 ZYXQ15942 572 aaKnown RBP29.01■■■□□ 2.23
ATXN3-252ENST00000620536 SDR42E1Q8WUS8 393 aa29.01■■■□□ 2.23
ATXN3-252ENST00000620536 ARMT1Q9H993 441 aa29.01■■■□□ 2.23
ATXN3-252ENST00000620536 SMARCA5O60264 1052 aaPredicted RBP29■■■□□ 2.23
ATXN3-252ENST00000620536 ADD2P35612 726 aa29■■■□□ 2.23
ATXN3-252ENST00000620536 U2AF1L4Q8WU68 220 aaKnown RBP29■■■□□ 2.23
ATXN3-252ENST00000620536 GTF3C2Q8WUA4 911 aaPredicted RBP29■■■□□ 2.23
ATXN3-252ENST00000620536 DCP1AQ9NPI6 582 aaPredicted RBP29■■■□□ 2.23
ATXN3-252ENST00000620536 C12orf42Q96LP6 360 aa28.99■■■□□ 2.23
ATXN3-252ENST00000620536 MBD4O95243 580 aa28.98■■■□□ 2.23
ATXN3-252ENST00000620536 GABPAQ06546 454 aa28.98■■■□□ 2.23
ATXN3-252ENST00000620536 CCAR1Q8IX12 1150 aaKnown RBP28.98■■■□□ 2.23
ATXN3-252ENST00000620536 KIAA1683Q9H0B3 1180 aa28.98■■■□□ 2.23
ATXN3-252ENST00000620536 TXNRD2Q9NNW7 524 aa28.98■■■□□ 2.23
ATXN3-252ENST00000620536 USP17L15C9J2P7 530 aa28.97■■■□□ 2.23
ATXN3-252ENST00000620536 USP17L13C9JLJ4 530 aa28.97■■■□□ 2.23
ATXN3-252ENST00000620536 USP17L11C9JVI0 530 aa28.97■■■□□ 2.23
ATXN3-252ENST00000620536 USP17L18D6R9N7 530 aa28.97■■■□□ 2.23
ATXN3-252ENST00000620536 USP17L22D6RA61 530 aa28.97■■■□□ 2.23
ATXN3-252ENST00000620536 USP17L17D6RBQ6 530 aa28.97■■■□□ 2.23
ATXN3-252ENST00000620536 USP17L19D6RCP7 530 aa28.97■■■□□ 2.23
ATXN3-252ENST00000620536 USP17L20D6RJB6 530 aa28.97■■■□□ 2.23
ATXN3-252ENST00000620536 MPHOSPH10O00566 681 aaKnown RBP28.97■■■□□ 2.23
ATXN3-252ENST00000620536 SGPL1O95470 568 aa28.97■■■□□ 2.23
ATXN3-252ENST00000620536 USP17L24Q0WX57 530 aa28.97■■■□□ 2.23
ATXN3-252ENST00000620536 ZSCAN25Q6NSZ9 544 aa28.97■■■□□ 2.23
ATXN3-252ENST00000620536 ATP8A2Q9NTI2 1148 aa28.97■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms