RNA–Protein interactions for RNA: ENST00000619887.4

CDH23-213, Transcript of cadherin related 23, humanhuman

TSL 1 (best) BASIC

Gene CDH23, Length 4,224 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-213ENST00000619887 RBM43Q6ZSC3 357 aaKnown RBP11.3□□□□□ -0.6
CDH23-213ENST00000619887 LRRC8AQ8IWT6 810 aa11.3□□□□□ -0.6
CDH23-213ENST00000619887 RBM17Q96I25 401 aaKnown RBP11.3□□□□□ -0.6
CDH23-213ENST00000619887 LZTS2Q9BRK4 669 aa11.3□□□□□ -0.6
CDH23-213ENST00000619887 VPS54Q9P1Q0 977 aa11.3□□□□□ -0.6
CDH23-213ENST00000619887 MARF1Q9Y4F3 1742 aaKnown RBP11.3□□□□□ -0.6
CDH23-213ENST00000619887 F8W031 263 aaPredicted RBP11.29□□□□□ -0.6
CDH23-213ENST00000619887 PLA2G4DQ86XP0 818 aa11.29□□□□□ -0.6
CDH23-213ENST00000619887 FDPSP14324 419 aaKnown RBP11.29□□□□□ -0.6
CDH23-213ENST00000619887 PNOCQ13519 176 aa11.29□□□□□ -0.6
CDH23-213ENST00000619887 ARHGAP29Q52LW3 1261 aa11.29□□□□□ -0.6
CDH23-213ENST00000619887 HEATR3Q7Z4Q2 680 aa11.29□□□□□ -0.6
CDH23-213ENST00000619887 CCDC24Q8N4L8 307 aa11.29□□□□□ -0.6
CDH23-213ENST00000619887 GOLGA6L1Q8N7Z2 621 aa11.29□□□□□ -0.6
CDH23-213ENST00000619887 AIFM3Q96NN9 605 aa11.29□□□□□ -0.6
CDH23-213ENST00000619887 BPIFA3Q9BQP9 254 aa11.29□□□□□ -0.6
CDH23-213ENST00000619887 BMP2KQ9NSY1 1161 aaPredicted RBP11.29□□□□□ -0.6
CDH23-213ENST00000619887 UBN2Q6ZU65 1347 aa11.29□□□□□ -0.6
CDH23-213ENST00000619887 LRMPQ12912 555 aa11.29□□□□□ -0.6
CDH23-213ENST00000619887 ZNF174Q15697 407 aa11.29□□□□□ -0.6
CDH23-213ENST00000619887 RRAGBQ5VZM2 374 aa11.29□□□□□ -0.6
CDH23-213ENST00000619887 FAM177A1Q8N128 213 aaPredicted RBP11.29□□□□□ -0.6
CDH23-213ENST00000619887 VAT1LQ9HCJ6 419 aa11.29□□□□□ -0.6
CDH23-213ENST00000619887 C6orf50Q9HD87 102 aa11.29□□□□□ -0.6
CDH23-213ENST00000619887 LEMD3Q9Y2U8 911 aa11.29□□□□□ -0.6
CDH23-213ENST00000619887 RIOK3O14730 519 aaKnown RBP11.28□□□□□ -0.6
CDH23-213ENST00000619887 RPS6KA4O75676 772 aa11.28□□□□□ -0.6
CDH23-213ENST00000619887 GNA11P29992 359 aa11.28□□□□□ -0.6
CDH23-213ENST00000619887 SF3B3Q15393 1217 aaKnown RBP11.28□□□□□ -0.6
CDH23-213ENST00000619887 DPCR1Q3MIW9 517 aa11.28□□□□□ -0.6
CDH23-213ENST00000619887 CALML4Q96GE6 196 aa11.28□□□□□ -0.6
CDH23-213ENST00000619887 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.28□□□□□ -0.6
CDH23-213ENST00000619887 VWA3AA6NCI4 1184 aa11.28□□□□□ -0.6
CDH23-213ENST00000619887 KIF5CO60282 957 aa11.28□□□□□ -0.6
CDH23-213ENST00000619887 URI1O94763 535 aaPredicted RBP11.28□□□□□ -0.6
CDH23-213ENST00000619887 NTSR2O95665 410 aa11.28□□□□□ -0.6
CDH23-213ENST00000619887 FGFR2P21802 821 aa11.28□□□□□ -0.6
CDH23-213ENST00000619887 CASQ1P31415 396 aa11.28□□□□□ -0.6
CDH23-213ENST00000619887 BARGINQ6ZT62 677 aa11.28□□□□□ -0.6
CDH23-213ENST00000619887 SRRTQ9BXP5 876 aaKnown RBP11.28□□□□□ -0.6
CDH23-213ENST00000619887 SPTLC3Q9NUV7 552 aa11.28□□□□□ -0.6
CDH23-213ENST00000619887 NARFQ9UHQ1 456 aa11.28□□□□□ -0.6
CDH23-213ENST00000619887 A0A0G2JLW4 131 aa11.28□□□□□ -0.6
CDH23-213ENST00000619887 IGSF3O75054 1194 aa11.28□□□□□ -0.6
CDH23-213ENST00000619887 SLU7O95391 586 aaKnown RBP11.28□□□□□ -0.6
CDH23-213ENST00000619887 HLA-DOAP06340 250 aa11.28□□□□□ -0.6
CDH23-213ENST00000619887 MCM7P33993 719 aa11.28□□□□□ -0.6
CDH23-213ENST00000619887 NAPAP54920 295 aa11.28□□□□□ -0.6
CDH23-213ENST00000619887 DTHD1Q6ZMT9 781 aa11.28□□□□□ -0.6
CDH23-213ENST00000619887 TEX11Q8IYF3 940 aa11.28□□□□□ -0.6
CDH23-213ENST00000619887 IGDCC4Q8TDY8 1250 aa11.28□□□□□ -0.6
CDH23-213ENST00000619887 CLIC6Q96NY7 704 aa11.28□□□□□ -0.6
CDH23-213ENST00000619887 SERTAD1Q9UHV2 236 aa11.28□□□□□ -0.6
CDH23-213ENST00000619887 GGA1Q9UJY5 639 aa11.28□□□□□ -0.6
CDH23-213ENST00000619887 USP21Q9UK80 565 aa11.28□□□□□ -0.6
CDH23-213ENST00000619887 SNAP23O00161 211 aa11.27□□□□□ -0.6
CDH23-213ENST00000619887 N4BP3O15049 544 aa11.27□□□□□ -0.6
CDH23-213ENST00000619887 PRPF3O43395 683 aaKnown RBP11.27□□□□□ -0.6
CDH23-213ENST00000619887 UFL1O94874 794 aa11.27□□□□□ -0.6
CDH23-213ENST00000619887 CDC27P30260 824 aa11.27□□□□□ -0.6
CDH23-213ENST00000619887 MINPP1Q9UNW1 487 aa11.27□□□□□ -0.6
CDH23-213ENST00000619887 HPS5Q9UPZ3 1129 aa11.27□□□□□ -0.6
CDH23-213ENST00000619887 FGFR1OPO95684 399 aaKnown RBP11.27□□□□□ -0.61
CDH23-213ENST00000619887 TRAPPC10P48553 1259 aa11.27□□□□□ -0.61
CDH23-213ENST00000619887 SPECC1Q5M775 1068 aa11.27□□□□□ -0.61
CDH23-213ENST00000619887 TEX35Q5T0J7 233 aa11.27□□□□□ -0.61
CDH23-213ENST00000619887 RESP18Q5W5W9 173 aa11.27□□□□□ -0.61
CDH23-213ENST00000619887 FAM114A1Q8IWE2 563 aa11.27□□□□□ -0.61
CDH23-213ENST00000619887 TBC1D22AQ8WUA7 517 aa11.27□□□□□ -0.61
CDH23-213ENST00000619887 RRP36Q96EU6 259 aaKnown RBP11.27□□□□□ -0.61
CDH23-213ENST00000619887 NFE2L3Q9Y4A8 694 aa11.27□□□□□ -0.61
CDH23-213ENST00000619887 SCG2P13521 617 aa11.27□□□□□ -0.61
CDH23-213ENST00000619887 DYNLL1P63167 89 aaKnown RBP11.27□□□□□ -0.61
CDH23-213ENST00000619887 TFAP4Q01664 338 aa11.27□□□□□ -0.61
CDH23-213ENST00000619887 CCDC96Q2M329 555 aa11.27□□□□□ -0.61
CDH23-213ENST00000619887 PIK3AP1Q6ZUJ8 805 aa11.27□□□□□ -0.61
CDH23-213ENST00000619887 CACTINQ8WUQ7 758 aaKnown RBP11.27□□□□□ -0.61
CDH23-213ENST00000619887 NRBP1Q9UHY1 535 aa11.27□□□□□ -0.61
CDH23-213ENST00000619887 INTS5Q6P9B9 1019 aaKnown RBP11.27□□□□□ -0.61
CDH23-213ENST00000619887 TRMT1LQ7Z2T5 733 aaKnown RBP11.27□□□□□ -0.61
CDH23-213ENST00000619887 TXLNBQ8N3L3 684 aa11.27□□□□□ -0.61
CDH23-213ENST00000619887 MARCH10Q8NA82 808 aaPredicted RBP11.27□□□□□ -0.61
CDH23-213ENST00000619887 LRRC27Q9C0I9 530 aa11.27□□□□□ -0.61
CDH23-213ENST00000619887 PCDHA5Q9Y5H7 936 aa11.27□□□□□ -0.61
CDH23-213ENST00000619887 CMTR1Q8N1G2 835 aaKnown RBP11.26□□□□□ -0.61
CDH23-213ENST00000619887 GJB4Q9NTQ9 266 aa11.26□□□□□ -0.61
CDH23-213ENST00000619887 RIC1Q4ADV7 1423 aa11.26□□□□□ -0.61
CDH23-213ENST00000619887 SALL1Q9NSC2 1324 aa11.26□□□□□ -0.61
CDH23-213ENST00000619887 PSMA7O14818 248 aa11.26□□□□□ -0.61
CDH23-213ENST00000619887 PARP1P09874 1014 aaKnown RBP11.26□□□□□ -0.61
CDH23-213ENST00000619887 CT47A1Q5JQC4 288 aaPredicted RBP11.26□□□□□ -0.61
CDH23-213ENST00000619887 SRPRBQ9Y5M8 271 aaKnown RBP11.26□□□□□ -0.61
CDH23-213ENST00000619887 ARFGEF2Q9Y6D5 1785 aa11.26□□□□□ -0.61
CDH23-213ENST00000619887 XDHP47989 1333 aa11.26□□□□□ -0.61
CDH23-213ENST00000619887 SPATA31A5Q5VU36 1347 aa11.26□□□□□ -0.61
CDH23-213ENST00000619887 SPATA31A7Q8IWB4 1347 aa11.26□□□□□ -0.61
CDH23-213ENST00000619887 ATP2B4P23634 1241 aa11.26□□□□□ -0.61
CDH23-213ENST00000619887 U2AF2P26368 475 aaKnown RBP eCLIP11.26□□□□□ -0.61
CDH23-213ENST00000619887 ZNF76P36508 570 aa11.26□□□□□ -0.61
CDH23-213ENST00000619887 IQCB1Q15051 598 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms