RNA–Protein interactions for RNA: ENST00000619874.4

SMIM11B-202, Transcript of small integral membrane protein 11B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM11B, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11B-202ENST00000619874 R3HDM1Q15032 1099 aaKnown RBP16.11■□□□□ 0.17
SMIM11B-202ENST00000619874 TMEM67Q5HYA8 995 aa16.11■□□□□ 0.17
SMIM11B-202ENST00000619874 CPLX2Q6PUV4 134 aaKnown RBP16.11■□□□□ 0.17
SMIM11B-202ENST00000619874 SYNE3Q6ZMZ3 975 aa16.11■□□□□ 0.17
SMIM11B-202ENST00000619874 USP17L1Q7RTZ2 530 aa16.11■□□□□ 0.17
SMIM11B-202ENST00000619874 TEX11Q8IYF3 940 aa16.11■□□□□ 0.17
SMIM11B-202ENST00000619874 NECAB1Q8N987 351 aa16.11■□□□□ 0.17
SMIM11B-202ENST00000619874 TEKT1Q969V4 418 aa16.11■□□□□ 0.17
SMIM11B-202ENST00000619874 UBAC1Q9BSL1 405 aa16.11■□□□□ 0.17
SMIM11B-202ENST00000619874 DBNDD1Q9H9R9 158 aa16.11■□□□□ 0.17
SMIM11B-202ENST00000619874 MCM9Q9NXL9 1143 aa16.11■□□□□ 0.17
SMIM11B-202ENST00000619874 TTF2Q9UNY4 1162 aaKnown RBP16.11■□□□□ 0.17
SMIM11B-202ENST00000619874 PSME4Q14997 1843 aa16.1■□□□□ 0.17
SMIM11B-202ENST00000619874 KLF18A0A0U1RQI7 1052 aa16.1■□□□□ 0.17
SMIM11B-202ENST00000619874 GOLGA8BA8MQT2 603 aa16.1■□□□□ 0.17
SMIM11B-202ENST00000619874 TK2O00142 265 aa16.1■□□□□ 0.17
SMIM11B-202ENST00000619874 IFIT3O14879 490 aaKnown RBP16.1■□□□□ 0.17
SMIM11B-202ENST00000619874 STX6O43752 255 aa16.1■□□□□ 0.17
SMIM11B-202ENST00000619874 CDKL5O76039 1030 aa16.1■□□□□ 0.17
SMIM11B-202ENST00000619874 PDIA3P30101 505 aaKnown RBP16.1■□□□□ 0.17
SMIM11B-202ENST00000619874 STK3Q13188 491 aa16.1■□□□□ 0.17
SMIM11B-202ENST00000619874 COL9A3Q14050 684 aaPredicted RBP16.1■□□□□ 0.17
SMIM11B-202ENST00000619874 GRIK5Q16478 980 aa16.1■□□□□ 0.17
SMIM11B-202ENST00000619874 CCDC178Q5BJE1 867 aa16.1■□□□□ 0.17
SMIM11B-202ENST00000619874 RRP12Q5JTH9 1297 aaKnown RBP16.1■□□□□ 0.17
SMIM11B-202ENST00000619874 IQCA1Q86XH1 822 aa16.1■□□□□ 0.17
SMIM11B-202ENST00000619874 SH3RF3Q8TEJ3 882 aaPredicted RBP16.1■□□□□ 0.17
SMIM11B-202ENST00000619874 NAP1L2Q9ULW6 460 aaPredicted RBP16.1■□□□□ 0.17
SMIM11B-202ENST00000619874 DAGLAQ9Y4D2 1042 aa16.1■□□□□ 0.17
SMIM11B-202ENST00000619874 DDX60LQ5H9U9 1706 aaKnown RBP16.09■□□□□ 0.17
SMIM11B-202ENST00000619874 CCDC69A6NI79 296 aa16.09■□□□□ 0.17
SMIM11B-202ENST00000619874 KCNA3P22001 575 aa16.09■□□□□ 0.17
SMIM11B-202ENST00000619874 SCRN1Q12765 414 aa16.09■□□□□ 0.17
SMIM11B-202ENST00000619874 WTAPQ15007 396 aa16.09■□□□□ 0.17
SMIM11B-202ENST00000619874 AOC3Q16853 763 aa16.09■□□□□ 0.17
SMIM11B-202ENST00000619874 DALRD3Q5D0E6 543 aaKnown RBP16.09■□□□□ 0.17
SMIM11B-202ENST00000619874 PPP4R3BQ5MIZ7 849 aa16.09■□□□□ 0.17
SMIM11B-202ENST00000619874 NFXL1Q6ZNB6 911 aa16.09■□□□□ 0.17
SMIM11B-202ENST00000619874 CYB5R4Q7L1T6 521 aa16.09■□□□□ 0.17
SMIM11B-202ENST00000619874 CHST3Q7LGC8 479 aa16.09■□□□□ 0.17
SMIM11B-202ENST00000619874 FAM184AQ8NB25 1140 aa16.09■□□□□ 0.17
SMIM11B-202ENST00000619874 RGS22Q8NE09 1264 aa16.09■□□□□ 0.17
SMIM11B-202ENST00000619874 SMARCC2Q8TAQ2 1214 aa16.09■□□□□ 0.17
SMIM11B-202ENST00000619874 MKRN1Q9UHC7 482 aaKnown RBP16.09■□□□□ 0.17
SMIM11B-202ENST00000619874 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.09■□□□□ 0.17
SMIM11B-202ENST00000619874 FOCADQ5VW36 1801 aa16.09■□□□□ 0.17
SMIM11B-202ENST00000619874 NID2Q14112 1375 aa16.09■□□□□ 0.17
SMIM11B-202ENST00000619874 BRCA1P38398 1863 aaKnown RBP16.08■□□□□ 0.17
SMIM11B-202ENST00000619874 CPLX1O14810 134 aa16.08■□□□□ 0.16
SMIM11B-202ENST00000619874 ZSCAN22P10073 491 aaPredicted RBP16.08■□□□□ 0.16
SMIM11B-202ENST00000619874 SYT1P21579 422 aa16.08■□□□□ 0.16
SMIM11B-202ENST00000619874 PPP2R5BQ15173 497 aa16.08■□□□□ 0.16
SMIM11B-202ENST00000619874 DACT2Q5SW24 774 aa16.08■□□□□ 0.16
SMIM11B-202ENST00000619874 C12orf60Q5U649 245 aa16.08■□□□□ 0.16
SMIM11B-202ENST00000619874 ZSWIM5Q9P217 1185 aa16.08■□□□□ 0.16
SMIM11B-202ENST00000619874 CDK5RAP2Q96SN8 1893 aa16.08■□□□□ 0.16
SMIM11B-202ENST00000619874 CCDC196A0A1B0GTZ2 297 aa16.07■□□□□ 0.16
SMIM11B-202ENST00000619874 ZBTB43O43298 467 aa16.07■□□□□ 0.16
SMIM11B-202ENST00000619874 BAG4O95429 457 aaKnown RBP16.07■□□□□ 0.16
SMIM11B-202ENST00000619874 POLR3DP05423 398 aaPredicted RBP16.07■□□□□ 0.16
SMIM11B-202ENST00000619874 METAP2P50579 478 aaKnown RBP eCLIP16.07■□□□□ 0.16
SMIM11B-202ENST00000619874 RHBDL3P58872 404 aa16.07■□□□□ 0.16
SMIM11B-202ENST00000619874 LARP1BQ659C4 914 aaKnown RBP16.07■□□□□ 0.16
SMIM11B-202ENST00000619874 APOA5Q6Q788 366 aa16.07■□□□□ 0.16
SMIM11B-202ENST00000619874 LARGE2Q8N3Y3 721 aa16.07■□□□□ 0.16
SMIM11B-202ENST00000619874 CERS5Q8N5B7 392 aa16.07■□□□□ 0.16
SMIM11B-202ENST00000619874 NSUN7Q8NE18 718 aaKnown RBP16.07■□□□□ 0.16
SMIM11B-202ENST00000619874 IGDCC4Q8TDY8 1250 aa16.07■□□□□ 0.16
SMIM11B-202ENST00000619874 TGFBRAP1Q8WUH2 860 aa16.07■□□□□ 0.16
SMIM11B-202ENST00000619874 LY9Q9HBG7 655 aa16.07■□□□□ 0.16
SMIM11B-202ENST00000619874 SLC12A7Q9Y666 1083 aa16.07■□□□□ 0.16
SMIM11B-202ENST00000619874 ZNF646O15015 1829 aaPredicted RBP16.07■□□□□ 0.16
SMIM11B-202ENST00000619874 FLT1P17948 1338 aa16.06■□□□□ 0.16
SMIM11B-202ENST00000619874 PTPDC1A2A3K4 754 aa16.06■□□□□ 0.16
SMIM11B-202ENST00000619874 RANBP6O60518 1105 aaKnown RBP16.06■□□□□ 0.16
SMIM11B-202ENST00000619874 PKP1Q13835 747 aa16.06■□□□□ 0.16
SMIM11B-202ENST00000619874 SKOR2Q2VWA4 1001 aaPredicted RBP16.06■□□□□ 0.16
SMIM11B-202ENST00000619874 ZDHHC15Q96MV8 337 aa16.06■□□□□ 0.16
SMIM11B-202ENST00000619874 SERPINA10Q9UK55 444 aa16.06■□□□□ 0.16
SMIM11B-202ENST00000619874 ZDHHC9Q9Y397 364 aa16.06■□□□□ 0.16
SMIM11B-202ENST00000619874 F13A1P00488 732 aa16.05■□□□□ 0.16
SMIM11B-202ENST00000619874 CALM1P0DP23 149 aa16.05■□□□□ 0.16
SMIM11B-202ENST00000619874 CALM2P0DP24 149 aa16.05■□□□□ 0.16
SMIM11B-202ENST00000619874 CALM3P0DP25 149 aa16.05■□□□□ 0.16
SMIM11B-202ENST00000619874 CRKP46108 304 aa16.05■□□□□ 0.16
SMIM11B-202ENST00000619874 MMP14P50281 582 aa16.05■□□□□ 0.16
SMIM11B-202ENST00000619874 CSPP1Q1MSJ5 1256 aa16.05■□□□□ 0.16
SMIM11B-202ENST00000619874 TTC6Q86TZ1 520 aa16.05■□□□□ 0.16
SMIM11B-202ENST00000619874 MAPKAPK5Q8IW41 473 aa16.05■□□□□ 0.16
SMIM11B-202ENST00000619874 NIM1KQ8IY84 436 aa16.05■□□□□ 0.16
SMIM11B-202ENST00000619874 ZSCAN10Q96SZ4 725 aaPredicted RBP16.05■□□□□ 0.16
SMIM11B-202ENST00000619874 TAOK3Q9H2K8 898 aa16.05■□□□□ 0.16
SMIM11B-202ENST00000619874 BRPF3Q9ULD4 1205 aa16.05■□□□□ 0.16
SMIM11B-202ENST00000619874 SCN9AQ15858 1988 aa16.05■□□□□ 0.16
SMIM11B-202ENST00000619874 MYH1P12882 1939 aa16.04■□□□□ 0.16
SMIM11B-202ENST00000619874 TNKSO95271 1327 aa16.04■□□□□ 0.16
SMIM11B-202ENST00000619874 GOLGA8AA7E2F4 631 aa16.04■□□□□ 0.16
SMIM11B-202ENST00000619874 F8W031 263 aaPredicted RBP16.04■□□□□ 0.16
SMIM11B-202ENST00000619874 H3BQV1 296 aa16.04■□□□□ 0.16
SMIM11B-202ENST00000619874 CCT2P78371 535 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 197.7 ms