RNA–Protein interactions for RNA: ENST00000619485.4

TP53-225, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,506 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-225ENST00000619485 LRRC4BQ9NT99 713 aa11.86□□□□□ -0.51
TP53-225ENST00000619485 KCNH3Q9ULD8 1083 aa11.86□□□□□ -0.51
TP53-225ENST00000619485 AKAP2Q9Y2D5 859 aa11.86□□□□□ -0.51
TP53-225ENST00000619485 BCORQ6W2J9 1755 aa11.86□□□□□ -0.51
TP53-225ENST00000619485 LAMB2P55268 1798 aa11.86□□□□□ -0.51
TP53-225ENST00000619485 IARSP41252 1262 aaKnown RBP11.86□□□□□ -0.51
TP53-225ENST00000619485 PDE4BQ07343 736 aa11.86□□□□□ -0.51
TP53-225ENST00000619485 KARSQ15046 597 aaKnown RBP11.86□□□□□ -0.51
TP53-225ENST00000619485 RRP12Q5JTH9 1297 aaKnown RBP11.86□□□□□ -0.51
TP53-225ENST00000619485 GRAMD1CQ8IYS0 662 aa11.86□□□□□ -0.51
TP53-225ENST00000619485 ZMYM6O95789 1325 aa11.86□□□□□ -0.51
TP53-225ENST00000619485 GOLGA8AA7E2F4 631 aa11.85□□□□□ -0.51
TP53-225ENST00000619485 CDKL5O76039 1030 aa11.85□□□□□ -0.51
TP53-225ENST00000619485 CASQ1P31415 396 aa11.85□□□□□ -0.51
TP53-225ENST00000619485 TAF3Q5VWG9 929 aa11.85□□□□□ -0.51
TP53-225ENST00000619485 TRIM65Q6PJ69 517 aa11.85□□□□□ -0.51
TP53-225ENST00000619485 VSTM4Q8IW00 320 aa11.85□□□□□ -0.51
TP53-225ENST00000619485 DHX37Q8IY37 1157 aaKnown RBP11.85□□□□□ -0.51
TP53-225ENST00000619485 BAG1Q99933 345 aaPredicted RBP11.85□□□□□ -0.51
TP53-225ENST00000619485 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.85□□□□□ -0.513e-6■■■■□ 24.2
TP53-225ENST00000619485 PPP2R2CQ9Y2T4 447 aa11.85□□□□□ -0.51
TP53-225ENST00000619485 ZNF532Q9HCE3 1301 aa11.85□□□□□ -0.51
TP53-225ENST00000619485 ZBTB43O43298 467 aa11.85□□□□□ -0.51
TP53-225ENST00000619485 ZSCAN12O43309 604 aa11.85□□□□□ -0.51
TP53-225ENST00000619485 CHRNDQ07001 517 aa11.85□□□□□ -0.51
TP53-225ENST00000619485 TMEM67Q5HYA8 995 aa11.85□□□□□ -0.51
TP53-225ENST00000619485 APOA5Q6Q788 366 aa11.85□□□□□ -0.51
TP53-225ENST00000619485 TOGARAM2Q6ZUX3 1019 aa11.85□□□□□ -0.51
TP53-225ENST00000619485 PHLPP2Q6ZVD8 1323 aa11.85□□□□□ -0.51
TP53-225ENST00000619485 FOXP4Q8IVH2 680 aaPredicted RBP11.85□□□□□ -0.51
TP53-225ENST00000619485 CMTR1Q8N1G2 835 aaKnown RBP11.85□□□□□ -0.51
TP53-225ENST00000619485 MIGA1Q8NAN2 632 aa11.85□□□□□ -0.51
TP53-225ENST00000619485 WDR24Q96S15 920 aa11.85□□□□□ -0.51
TP53-225ENST00000619485 TNRC6CQ9HCJ0 1690 aaKnown RBP11.85□□□□□ -0.51
TP53-225ENST00000619485 PLA2G4AP47712 749 aa11.84□□□□□ -0.51
TP53-225ENST00000619485 REXO1L1PQ8IX06 675 aa11.84□□□□□ -0.51
TP53-225ENST00000619485 FNBP4Q8N3X1 1017 aaPredicted RBP11.84□□□□□ -0.51
TP53-225ENST00000619485 ZKSCAN3Q9BRR0 538 aa11.84□□□□□ -0.51
TP53-225ENST00000619485 CDCA7Q9BWT1 371 aaPredicted RBP11.84□□□□□ -0.51
TP53-225ENST00000619485 EPB41L4AQ9HCS5 686 aaPredicted RBP11.84□□□□□ -0.51
TP53-225ENST00000619485 TUBE1Q9UJT0 475 aa11.84□□□□□ -0.51
TP53-225ENST00000619485 KCNJ14Q9UNX9 436 aa11.84□□□□□ -0.51
TP53-225ENST00000619485 NFE2L3Q9Y4A8 694 aa11.84□□□□□ -0.51
TP53-225ENST00000619485 PARP3Q9Y6F1 533 aa11.84□□□□□ -0.51
TP53-225ENST00000619485 AFF2P51816 1311 aa11.84□□□□□ -0.51
TP53-225ENST00000619485 TCRBV5S4A2TA0A5A2 114 aa11.84□□□□□ -0.51
TP53-225ENST00000619485 VWA3AA6NCI4 1184 aa11.84□□□□□ -0.51
TP53-225ENST00000619485 POLR2DO15514 142 aaKnown RBP11.84□□□□□ -0.51
TP53-225ENST00000619485 PDE6AP16499 860 aa11.84□□□□□ -0.51
TP53-225ENST00000619485 GRIN1Q05586 938 aa11.84□□□□□ -0.51
TP53-225ENST00000619485 DHX8Q14562 1220 aaKnown RBP11.84□□□□□ -0.51
TP53-225ENST00000619485 PTPAQ15257 358 aa11.84□□□□□ -0.51
TP53-225ENST00000619485 KRBA2Q6ZNG9 492 aa11.84□□□□□ -0.51
TP53-225ENST00000619485 FBXL16Q8N461 479 aa11.84□□□□□ -0.51
TP53-225ENST00000619485 CPLX3Q8WVH0 158 aa11.84□□□□□ -0.51
TP53-225ENST00000619485 ARMT1Q9H993 441 aa11.84□□□□□ -0.51
TP53-225ENST00000619485 ZCCHC17Q9NP64 241 aaKnown RBP11.84□□□□□ -0.51
TP53-225ENST00000619485 INTS13Q9NVM9 706 aa11.84□□□□□ -0.51
TP53-225ENST00000619485 FAM53CQ9NYF3 392 aa11.84□□□□□ -0.51
TP53-225ENST00000619485 A0A1B0GUL6 1792 aa11.84□□□□□ -0.51
TP53-225ENST00000619485 SH2B2O14492 632 aaPredicted RBP11.83□□□□□ -0.52
TP53-225ENST00000619485 PPP6R2O75170 966 aa11.83□□□□□ -0.52
TP53-225ENST00000619485 TADA3O75528 432 aa11.83□□□□□ -0.52
TP53-225ENST00000619485 BMP6P22004 513 aa11.83□□□□□ -0.52
TP53-225ENST00000619485 ADD2P35612 726 aa11.83□□□□□ -0.52
TP53-225ENST00000619485 CTDSPL2Q05D32 466 aa11.83□□□□□ -0.52
TP53-225ENST00000619485 RESP18Q5W5W9 173 aa11.83□□□□□ -0.52
TP53-225ENST00000619485 KLHL10Q6JEL2 608 aa11.83□□□□□ -0.52
TP53-225ENST00000619485 NEK11Q8NG66 645 aa11.83□□□□□ -0.52
TP53-225ENST00000619485 TIGD1Q96MW7 591 aa11.83□□□□□ -0.52
TP53-225ENST00000619485 LZTFL1Q9NQ48 299 aa11.83□□□□□ -0.52
TP53-225ENST00000619485 HPSEQ9Y251 543 aa11.83□□□□□ -0.52
TP53-225ENST00000619485 THSD7AQ9UPZ6 1657 aa11.83□□□□□ -0.52
TP53-225ENST00000619485 BTBD18B2RXH4 712 aa11.83□□□□□ -0.52
TP53-225ENST00000619485 IFIT3O14879 490 aaKnown RBP11.83□□□□□ -0.52
TP53-225ENST00000619485 ARHGAP6O43182 974 aa11.83□□□□□ -0.52
TP53-225ENST00000619485 RANBP6O60518 1105 aaKnown RBP11.83□□□□□ -0.52
TP53-225ENST00000619485 PRR29P0C7W0 189 aa11.83□□□□□ -0.52
TP53-225ENST00000619485 KCNJ6P48051 423 aa11.83□□□□□ -0.52
TP53-225ENST00000619485 FMR1Q06787 632 aaKnown RBP eCLIP11.83□□□□□ -0.52
TP53-225ENST00000619485 TXNRD3Q86VQ6 643 aa11.83□□□□□ -0.52
TP53-225ENST00000619485 MAGEB6Q8N7X4 407 aa11.83□□□□□ -0.52
TP53-225ENST00000619485 KRI1Q8N9T8 703 aaKnown RBP11.83□□□□□ -0.52
TP53-225ENST00000619485 ZNF384Q8TF68 577 aa11.83□□□□□ -0.52
TP53-225ENST00000619485 AIDAQ96BJ3 306 aa11.83□□□□□ -0.52
TP53-225ENST00000619485 MPHOSPH8Q99549 860 aa11.83□□□□□ -0.52
TP53-225ENST00000619485 MAP3K14Q99558 947 aa11.83□□□□□ -0.52
TP53-225ENST00000619485 TFCP2L1Q9NZI6 479 aa11.83□□□□□ -0.52
TP53-225ENST00000619485 CCNL1Q9UK58 526 aaPredicted RBP11.83□□□□□ -0.52
TP53-225ENST00000619485 SLC12A7Q9Y666 1083 aa11.83□□□□□ -0.52
TP53-225ENST00000619485 CICQ96RK0 1608 aaPredicted RBP11.82□□□□□ -0.52
TP53-225ENST00000619485 EFCAB8A8MWE9 144 aa11.82□□□□□ -0.52
TP53-225ENST00000619485 GUCY1A2P33402 732 aa11.82□□□□□ -0.52
TP53-225ENST00000619485 PPP2R3AQ06190 1150 aa11.82□□□□□ -0.52
TP53-225ENST00000619485 SSRP1Q08945 709 aaKnown RBP11.82□□□□□ -0.52
TP53-225ENST00000619485 PUM3Q15397 648 aaKnown RBP11.82□□□□□ -0.52
TP53-225ENST00000619485 CREBRFQ8IUR6 639 aa11.82□□□□□ -0.52
TP53-225ENST00000619485 CCDC12Q8WUD4 166 aaPredicted RBP11.82□□□□□ -0.52
TP53-225ENST00000619485 ARHGEF1Q92888 912 aaKnown RBP11.82□□□□□ -0.52
TP53-225ENST00000619485 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms