RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 GPAA1O43292 621 aa8.01□□□□□ -1.13
SRGAP3-213ENST00000618999 UFL1O94874 794 aa8.01□□□□□ -1.13
SRGAP3-213ENST00000618999 PDE6AP16499 860 aa8.01□□□□□ -1.13
SRGAP3-213ENST00000618999 HAND2P61296 217 aa8.01□□□□□ -1.13
SRGAP3-213ENST00000618999 APOBRQ0VD83 1088 aa8.01□□□□□ -1.13
SRGAP3-213ENST00000618999 KMT5BQ4FZB7 885 aa8.01□□□□□ -1.13
SRGAP3-213ENST00000618999 FBXO38Q6PIJ6 1188 aa8.01□□□□□ -1.13
SRGAP3-213ENST00000618999 GIPC2Q8TF65 315 aa8.01□□□□□ -1.13
SRGAP3-213ENST00000618999 KCNB2Q92953 911 aa8.01□□□□□ -1.13
SRGAP3-213ENST00000618999 ZNF512BQ96KM6 892 aaPredicted RBP8.01□□□□□ -1.13
SRGAP3-213ENST00000618999 FAM84BQ96KN1 310 aaPredicted RBP8.01□□□□□ -1.13
SRGAP3-213ENST00000618999 GPR101Q96P66 508 aaPredicted RBP8.01□□□□□ -1.13
SRGAP3-213ENST00000618999 SRRTQ9BXP5 876 aaKnown RBP8.01□□□□□ -1.13
SRGAP3-213ENST00000618999 CWC15Q9P013 229 aaKnown RBP8.01□□□□□ -1.13
SRGAP3-213ENST00000618999 BBOX1O75936 387 aa8□□□□□ -1.13
SRGAP3-213ENST00000618999 HSPD1P10809 573 aaKnown RBP8□□□□□ -1.13
SRGAP3-213ENST00000618999 KLRK1P26718 216 aa8□□□□□ -1.13
SRGAP3-213ENST00000618999 TRIM29Q14134 588 aa8□□□□□ -1.13
SRGAP3-213ENST00000618999 BRIP1Q9BX63 1249 aa8□□□□□ -1.13
SRGAP3-213ENST00000618999 TSPYL1Q9H0U9 437 aa8□□□□□ -1.13
SRGAP3-213ENST00000618999 DENND2AQ9ULE3 1009 aa8□□□□□ -1.13
SRGAP3-213ENST00000618999 PNPLA7Q6ZV29 1317 aa8□□□□□ -1.13
SRGAP3-213ENST00000618999 USP27XA6NNY8 438 aa8□□□□□ -1.13
SRGAP3-213ENST00000618999 TOP1P11387 765 aaKnown RBP8□□□□□ -1.13
SRGAP3-213ENST00000618999 ADD2P35612 726 aa8□□□□□ -1.13
SRGAP3-213ENST00000618999 ST3GAL1Q11201 340 aa8□□□□□ -1.13
SRGAP3-213ENST00000618999 ERCC6LQ2NKX8 1250 aa8□□□□□ -1.13
SRGAP3-213ENST00000618999 MIGA1Q8NAN2 632 aa8□□□□□ -1.13
SRGAP3-213ENST00000618999 CCDC34Q96HJ3 373 aa8□□□□□ -1.13
SRGAP3-213ENST00000618999 USP28Q96RU2 1077 aa8□□□□□ -1.13
SRGAP3-213ENST00000618999 A0A1B0GVL5 298 aa8□□□□□ -1.13
SRGAP3-213ENST00000618999 POLR3DP05423 398 aaPredicted RBP8□□□□□ -1.13
SRGAP3-213ENST00000618999 CYP7A1P22680 504 aa8□□□□□ -1.13
SRGAP3-213ENST00000618999 PDE6BP35913 854 aa8□□□□□ -1.13
SRGAP3-213ENST00000618999 FAM193AP78312 1265 aa8□□□□□ -1.13
SRGAP3-213ENST00000618999 TRDNQ13061 729 aa8□□□□□ -1.13
SRGAP3-213ENST00000618999 MAP2K5Q13163 448 aa8□□□□□ -1.13
SRGAP3-213ENST00000618999 C9orf131Q5VYM1 1079 aa8□□□□□ -1.13
SRGAP3-213ENST00000618999 RBM43Q6ZSC3 357 aaKnown RBP8□□□□□ -1.13
SRGAP3-213ENST00000618999 ERCC4Q92889 916 aaPredicted RBP8□□□□□ -1.13
SRGAP3-213ENST00000618999 CAMKK2Q96RR4 588 aa8□□□□□ -1.13
SRGAP3-213ENST00000618999 GGA1Q9UJY5 639 aa8□□□□□ -1.13
SRGAP3-213ENST00000618999 RCOR1Q9UKL0 485 aa8□□□□□ -1.13
SRGAP3-213ENST00000618999 XDHP47989 1333 aa8□□□□□ -1.13
SRGAP3-213ENST00000618999 UBE3CQ15386 1083 aa7.99□□□□□ -1.13
SRGAP3-213ENST00000618999 TTLL5Q6EMB2 1281 aa7.99□□□□□ -1.13
SRGAP3-213ENST00000618999 TRERF1Q96PN7 1200 aa7.99□□□□□ -1.13
SRGAP3-213ENST00000618999 ALDH8A1Q9H2A2 487 aaPredicted RBP7.99□□□□□ -1.13
SRGAP3-213ENST00000618999 LEMD3Q9Y2U8 911 aa7.99□□□□□ -1.13
SRGAP3-213ENST00000618999 RFX7Q2KHR2 1363 aa7.99□□□□□ -1.13
SRGAP3-213ENST00000618999 MED23Q9ULK4 1368 aa7.99□□□□□ -1.13
SRGAP3-213ENST00000618999 RIMBP2O15034 1052 aa7.99□□□□□ -1.13
SRGAP3-213ENST00000618999 MBD4O95243 580 aa7.99□□□□□ -1.13
SRGAP3-213ENST00000618999 IQCB1Q15051 598 aa7.99□□□□□ -1.13
SRGAP3-213ENST00000618999 IMMTQ16891 758 aaKnown RBP7.99□□□□□ -1.13
SRGAP3-213ENST00000618999 SLC51AQ86UW1 340 aa7.99□□□□□ -1.13
SRGAP3-213ENST00000618999 TXNRD3Q86VQ6 643 aa7.99□□□□□ -1.13
SRGAP3-213ENST00000618999 XPO4Q9C0E2 1151 aaKnown RBP7.99□□□□□ -1.13
SRGAP3-213ENST00000618999 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.99□□□□□ -1.13
SRGAP3-213ENST00000618999 RREB1Q92766 1687 aa7.99□□□□□ -1.13
SRGAP3-213ENST00000618999 SPTLC2O15270 562 aa7.99□□□□□ -1.13
SRGAP3-213ENST00000618999 PFKFB2O60825 505 aa7.99□□□□□ -1.13
SRGAP3-213ENST00000618999 CYP21A2P08686 494 aa7.99□□□□□ -1.13
SRGAP3-213ENST00000618999 UBASH3AP57075 661 aa7.99□□□□□ -1.13
SRGAP3-213ENST00000618999 SCRN1Q12765 414 aa7.99□□□□□ -1.13
SRGAP3-213ENST00000618999 C2CD5Q86YS7 1000 aa7.99□□□□□ -1.13
SRGAP3-213ENST00000618999 STK11IPQ8N1F8 1099 aa7.99□□□□□ -1.13
SRGAP3-213ENST00000618999 DSCC1Q9BVC3 393 aa7.99□□□□□ -1.13
SRGAP3-213ENST00000618999 TOMM22Q9NS69 142 aa7.99□□□□□ -1.13
SRGAP3-213ENST00000618999 ZNF831Q5JPB2 1677 aa7.99□□□□□ -1.13
SRGAP3-213ENST00000618999 LY75O60449 1722 aa7.99□□□□□ -1.13
SRGAP3-213ENST00000618999 A0A087WWV3 80 aa7.98□□□□□ -1.13
SRGAP3-213ENST00000618999 PSDA5PKW4 1024 aaPredicted RBP7.98□□□□□ -1.13
SRGAP3-213ENST00000618999 H0YIN7 160 aa7.98□□□□□ -1.13
SRGAP3-213ENST00000618999 ZNF213O14771 459 aa7.98□□□□□ -1.13
SRGAP3-213ENST00000618999 ALDH1B1P30837 517 aa7.98□□□□□ -1.13
SRGAP3-213ENST00000618999 CASQ1P31415 396 aa7.98□□□□□ -1.13
SRGAP3-213ENST00000618999 GPSM2P81274 684 aa7.98□□□□□ -1.13
SRGAP3-213ENST00000618999 PPP1R15BQ5SWA1 713 aa7.98□□□□□ -1.13
SRGAP3-213ENST00000618999 ISM2Q6H9L7 571 aa7.98□□□□□ -1.13
SRGAP3-213ENST00000618999 ZNF804AQ7Z570 1209 aa7.98□□□□□ -1.13
SRGAP3-213ENST00000618999 TICAM2Q86XR7 235 aa7.98□□□□□ -1.13
SRGAP3-213ENST00000618999 FTOQ9C0B1 505 aaKnown RBP eCLIP7.98□□□□□ -1.13
SRGAP3-213ENST00000618999 ARMT1Q9H993 441 aa7.98□□□□□ -1.13
SRGAP3-213ENST00000618999 TAF6LQ9Y6J9 622 aa7.98□□□□□ -1.13
SRGAP3-213ENST00000618999 PPEF1O14829 653 aaPredicted RBP7.98□□□□□ -1.13
SRGAP3-213ENST00000618999 AP1G2O75843 785 aa7.98□□□□□ -1.13
SRGAP3-213ENST00000618999 FGAP02671 866 aa7.98□□□□□ -1.13
SRGAP3-213ENST00000618999 FBXO33Q7Z6M2 555 aa7.98□□□□□ -1.13
SRGAP3-213ENST00000618999 TXLNBQ8N3L3 684 aa7.98□□□□□ -1.13
SRGAP3-213ENST00000618999 GOLGA6L1Q8N7Z2 621 aa7.98□□□□□ -1.13
SRGAP3-213ENST00000618999 PPP1R13BQ96KQ4 1090 aa7.98□□□□□ -1.13
SRGAP3-213ENST00000618999 NCOA5Q9HCD5 579 aaKnown RBP7.98□□□□□ -1.13
SRGAP3-213ENST00000618999 KIAA1468Q9P260 1216 aa7.98□□□□□ -1.13
SRGAP3-213ENST00000618999 ORC3Q9UBD5 711 aaPredicted RBP7.98□□□□□ -1.13
SRGAP3-213ENST00000618999 MYH3P11055 1940 aa7.98□□□□□ -1.13
SRGAP3-213ENST00000618999 GOLGA6L9A6NEM1 432 aa7.98□□□□□ -1.13
SRGAP3-213ENST00000618999 NPR1P16066 1061 aa7.98□□□□□ -1.13
SRGAP3-213ENST00000618999 ATP2B4P23634 1241 aa7.98□□□□□ -1.13
SRGAP3-213ENST00000618999 SKIV2LQ15477 1246 aaKnown RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms