RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-233ENST00000618836 CCDC144CPQ8IYA2 1237 aa4.73□□□□□ -1.65
UBE2D3-233ENST00000618836 LRRC59Q96AG4 307 aaKnown RBP4.73□□□□□ -1.65
UBE2D3-233ENST00000618836 CEP95Q96GE4 821 aa4.73□□□□□ -1.65
UBE2D3-233ENST00000618836 CDCA7LQ96GN5 454 aa4.73□□□□□ -1.65
UBE2D3-233ENST00000618836 FAM81BQ96LP2 452 aa4.73□□□□□ -1.65
UBE2D3-233ENST00000618836 C1orf74Q96LT6 269 aa4.73□□□□□ -1.65
UBE2D3-233ENST00000618836 ATP6V0A2Q9Y487 856 aa4.73□□□□□ -1.65
UBE2D3-233ENST00000618836 KANK1Q14678 1352 aa4.73□□□□□ -1.65
UBE2D3-233ENST00000618836 DHX29Q7Z478 1369 aaKnown RBP4.73□□□□□ -1.65
UBE2D3-233ENST00000618836 TMCO5BA8MYB1 307 aa4.73□□□□□ -1.65
UBE2D3-233ENST00000618836 DYNC1I1O14576 645 aa4.73□□□□□ -1.65
UBE2D3-233ENST00000618836 RAC2P15153 192 aa4.73□□□□□ -1.65
UBE2D3-233ENST00000618836 UBA7P41226 1012 aa4.73□□□□□ -1.65
UBE2D3-233ENST00000618836 UBASH3AP57075 661 aa4.73□□□□□ -1.65
UBE2D3-233ENST00000618836 WTAPQ15007 396 aa4.73□□□□□ -1.65
UBE2D3-233ENST00000618836 FAAH2Q6GMR7 532 aa4.73□□□□□ -1.65
UBE2D3-233ENST00000618836 MCM10Q7L590 875 aa4.73□□□□□ -1.65
UBE2D3-233ENST00000618836 TBC1D31Q96DN5 1066 aa4.73□□□□□ -1.65
UBE2D3-233ENST00000618836 NAF1Q96HR8 494 aaKnown RBP4.73□□□□□ -1.65
UBE2D3-233ENST00000618836 PLEKHA5Q9HAU0 1116 aa4.73□□□□□ -1.65
UBE2D3-233ENST00000618836 TCF7L2Q9NQB0 619 aa4.73□□□□□ -1.65
UBE2D3-233ENST00000618836 RRP15Q9Y3B9 282 aaKnown RBP4.73□□□□□ -1.65
UBE2D3-233ENST00000618836 SPTLC2O15270 562 aa4.72□□□□□ -1.65
UBE2D3-233ENST00000618836 KIF5BP33176 963 aa4.72□□□□□ -1.65
UBE2D3-233ENST00000618836 NFX1Q12986 1120 aaKnown RBP4.72□□□□□ -1.65
UBE2D3-233ENST00000618836 MORC3Q14149 939 aa4.72□□□□□ -1.65
UBE2D3-233ENST00000618836 PDCD2Q16342 344 aaPredicted RBP4.72□□□□□ -1.65
UBE2D3-233ENST00000618836 SHROOM1Q2M3G4 852 aaPredicted RBP4.72□□□□□ -1.65
UBE2D3-233ENST00000618836 ALFQ53S48 1182 aa4.72□□□□□ -1.65
UBE2D3-233ENST00000618836 SFMBT2Q5VUG0 894 aa4.72□□□□□ -1.65
UBE2D3-233ENST00000618836 RASGRP2Q7LDG7 609 aa4.72□□□□□ -1.65
UBE2D3-233ENST00000618836 ZNF75CPQ92670 426 aaPredicted RBP4.72□□□□□ -1.65
UBE2D3-233ENST00000618836 GBP4Q96PP9 640 aa4.72□□□□□ -1.65
UBE2D3-233ENST00000618836 SLC39A3Q9BRY0 314 aa4.72□□□□□ -1.65
UBE2D3-233ENST00000618836 TGIF2Q9GZN2 237 aa4.72□□□□□ -1.65
UBE2D3-233ENST00000618836 NACA2Q9H009 215 aa4.72□□□□□ -1.65
UBE2D3-233ENST00000618836 DIAPH3Q9NSV4 1193 aa4.72□□□□□ -1.65
UBE2D3-233ENST00000618836 EXOC1Q9NV70 894 aa4.72□□□□□ -1.65
UBE2D3-233ENST00000618836 SEL1LQ9UBV2 794 aa4.72□□□□□ -1.65
UBE2D3-233ENST00000618836 CEP350Q5VT06 3117 aa4.72□□□□□ -1.65
UBE2D3-233ENST00000618836 NOS1P29475 1434 aa4.72□□□□□ -1.65
UBE2D3-233ENST00000618836 RCCD1A6NED2 376 aa4.72□□□□□ -1.65
UBE2D3-233ENST00000618836 DLL1O00548 723 aa4.72□□□□□ -1.65
UBE2D3-233ENST00000618836 FIBPO43427 364 aa4.72□□□□□ -1.65
UBE2D3-233ENST00000618836 AKR1B10O60218 316 aa4.72□□□□□ -1.65
UBE2D3-233ENST00000618836 SFTPCP11686 197 aa4.72□□□□□ -1.65
UBE2D3-233ENST00000618836 GLULP15104 373 aa4.72□□□□□ -1.65
UBE2D3-233ENST00000618836 PLA2G5P39877 138 aa4.72□□□□□ -1.65
UBE2D3-233ENST00000618836 CTDSPL2Q05D32 466 aa4.72□□□□□ -1.65
UBE2D3-233ENST00000618836 CHAF1AQ13111 956 aaPredicted RBP4.72□□□□□ -1.65
UBE2D3-233ENST00000618836 PRPF4BQ13523 1007 aaKnown RBP4.72□□□□□ -1.65
UBE2D3-233ENST00000618836 WWC2Q6AWC2 1192 aa4.72□□□□□ -1.65
UBE2D3-233ENST00000618836 SPATS2Q86XZ4 545 aaKnown RBP4.72□□□□□ -1.65
UBE2D3-233ENST00000618836 NBPF15Q8N660 670 aa4.72□□□□□ -1.65
UBE2D3-233ENST00000618836 SH3GLB2Q9NR46 395 aa4.72□□□□□ -1.65
UBE2D3-233ENST00000618836 PHRF1Q9P1Y6 1649 aaKnown RBP4.72□□□□□ -1.65
UBE2D3-233ENST00000618836 AKAP12Q02952 1782 aa4.71□□□□□ -1.65
UBE2D3-233ENST00000618836 SLIT3O75094 1523 aa4.71□□□□□ -1.65
UBE2D3-233ENST00000618836 STXBP3O00186 592 aa4.71□□□□□ -1.65
UBE2D3-233ENST00000618836 FOXN3O00409 490 aaPredicted RBP4.71□□□□□ -1.65
UBE2D3-233ENST00000618836 CPLX1O14810 134 aa4.71□□□□□ -1.65
UBE2D3-233ENST00000618836 KIAA0754O94854 1291 aa4.71□□□□□ -1.65
UBE2D3-233ENST00000618836 SEC24BO95487 1268 aa4.71□□□□□ -1.65
UBE2D3-233ENST00000618836 ATF7P17544 494 aaPredicted RBP4.71□□□□□ -1.65
UBE2D3-233ENST00000618836 DEUP1Q05D60 604 aa4.71□□□□□ -1.65
UBE2D3-233ENST00000618836 VAC14Q08AM6 782 aa4.71□□□□□ -1.65
UBE2D3-233ENST00000618836 R3HDM1Q15032 1099 aaKnown RBP4.71□□□□□ -1.65
UBE2D3-233ENST00000618836 PTPN14Q15678 1187 aa4.71□□□□□ -1.65
UBE2D3-233ENST00000618836 PKN2Q16513 984 aaKnown RBP4.71□□□□□ -1.65
UBE2D3-233ENST00000618836 CFAP161Q6P656 301 aa4.71□□□□□ -1.65
UBE2D3-233ENST00000618836 BRINP3Q76B58 766 aa4.71□□□□□ -1.65
UBE2D3-233ENST00000618836 TTC13Q8NBP0 860 aa4.71□□□□□ -1.65
UBE2D3-233ENST00000618836 SLC16A10Q8TF71 515 aa4.71□□□□□ -1.65
UBE2D3-233ENST00000618836 RSAD2Q8WXG1 361 aa4.71□□□□□ -1.65
UBE2D3-233ENST00000618836 ABHD8Q96I13 439 aa4.71□□□□□ -1.65
UBE2D3-233ENST00000618836 ZNF594Q96JF6 807 aaPredicted RBP4.71□□□□□ -1.65
UBE2D3-233ENST00000618836 TACO1Q9BSH4 297 aaKnown RBP4.71□□□□□ -1.65
UBE2D3-233ENST00000618836 TCHPQ9BT92 498 aa4.71□□□□□ -1.65
UBE2D3-233ENST00000618836 PSD3Q9NYI0 1048 aa4.71□□□□□ -1.65
UBE2D3-233ENST00000618836 CALCOCO1Q9P1Z2 691 aa4.71□□□□□ -1.65
UBE2D3-233ENST00000618836 ZBED9Q6R2W3 1325 aa4.71□□□□□ -1.65
UBE2D3-233ENST00000618836 LRRC37A3O60309 1634 aa4.71□□□□□ -1.66
UBE2D3-233ENST00000618836 KDRP35968 1356 aa4.71□□□□□ -1.66
UBE2D3-233ENST00000618836 DHX57Q6P158 1386 aaKnown RBP4.71□□□□□ -1.66
UBE2D3-233ENST00000618836 PSDA5PKW4 1024 aaPredicted RBP4.71□□□□□ -1.66
UBE2D3-233ENST00000618836 DDX11L8A8MPP1 907 aa4.71□□□□□ -1.66
UBE2D3-233ENST00000618836 TSPAN6O43657 245 aa4.71□□□□□ -1.66
UBE2D3-233ENST00000618836 CLASP2O75122 1294 aaKnown RBP4.71□□□□□ -1.66
UBE2D3-233ENST00000618836 MYL1P05976 194 aa4.71□□□□□ -1.66
UBE2D3-233ENST00000618836 PAPOLAP51003 745 aaKnown RBP4.71□□□□□ -1.66
UBE2D3-233ENST00000618836 SEC13P55735 322 aa4.71□□□□□ -1.66
UBE2D3-233ENST00000618836 NLRP12P59046 1061 aa4.71□□□□□ -1.66
UBE2D3-233ENST00000618836 POSTNQ15063 836 aa4.71□□□□□ -1.66
UBE2D3-233ENST00000618836 CLPPQ16740 277 aaPredicted RBP4.71□□□□□ -1.66
UBE2D3-233ENST00000618836 ANKRD39Q53RE8 183 aa4.71□□□□□ -1.66
UBE2D3-233ENST00000618836 MTHFD1LQ6UB35 978 aa4.71□□□□□ -1.66
UBE2D3-233ENST00000618836 BEND5Q7L4P6 421 aa4.71□□□□□ -1.66
UBE2D3-233ENST00000618836 MYLK4Q86YV6 388 aaPredicted RBP4.71□□□□□ -1.66
UBE2D3-233ENST00000618836 E2F7Q96AV8 911 aa4.71□□□□□ -1.66
UBE2D3-233ENST00000618836 SYT17Q9BSW7 474 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms