RNA–Protein interactions for RNA: ENST00000618469.1

BRCA1-228, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-228ENST00000618469 CTGFP29279 349 aa19.29■□□□□ 0.68
BRCA1-228ENST00000618469 KIF22Q14807 665 aa19.29■□□□□ 0.68
BRCA1-228ENST00000618469 UBE3CQ15386 1083 aa19.29■□□□□ 0.68
BRCA1-228ENST00000618469 KBTBD3Q8NAB2 608 aa19.29■□□□□ 0.68
BRCA1-228ENST00000618469 PI4K2BQ8TCG2 481 aa19.29■□□□□ 0.68
BRCA1-228ENST00000618469 SDR42E1Q8WUS8 393 aa19.29■□□□□ 0.68
BRCA1-228ENST00000618469 RWDD1Q9H446 243 aaPredicted RBP19.29■□□□□ 0.68
BRCA1-228ENST00000618469 CPA4Q9UI42 421 aa19.29■□□□□ 0.68
BRCA1-228ENST00000618469 ZHX2Q9Y6X8 837 aa19.29■□□□□ 0.68
BRCA1-228ENST00000618469 SALL3Q9BXA9 1300 aa19.28■□□□□ 0.68
BRCA1-228ENST00000618469 BAZ2AQ9UIF9 1905 aaKnown RBP19.28■□□□□ 0.68
BRCA1-228ENST00000618469 TLR2O60603 784 aa19.28■□□□□ 0.68
BRCA1-228ENST00000618469 GLRX3O76003 335 aaKnown RBP19.28■□□□□ 0.68
BRCA1-228ENST00000618469 RRP1BQ14684 758 aaKnown RBP19.28■□□□□ 0.68
BRCA1-228ENST00000618469 LOC285556D6RIA3 1793 aa19.27■□□□□ 0.68
BRCA1-228ENST00000618469 TRIM75PA6NK02 468 aa19.27■□□□□ 0.68
BRCA1-228ENST00000618469 CAP2P40123 477 aa19.27■□□□□ 0.68
BRCA1-228ENST00000618469 CXCL11O14625 94 aa19.26■□□□□ 0.67
BRCA1-228ENST00000618469 GDF11O95390 407 aa19.26■□□□□ 0.67
BRCA1-228ENST00000618469 B4GALNT3Q6L9W6 998 aa19.26■□□□□ 0.67
BRCA1-228ENST00000618469 TTC6Q86TZ1 520 aa19.26■□□□□ 0.67
BRCA1-228ENST00000618469 METTL16Q86W50 562 aaKnown RBP19.26■□□□□ 0.67
BRCA1-228ENST00000618469 FOXP4Q8IVH2 680 aaPredicted RBP19.26■□□□□ 0.67
BRCA1-228ENST00000618469 SMC5Q8IY18 1101 aa19.26■□□□□ 0.67
BRCA1-228ENST00000618469 LNPKQ9C0E8 428 aa19.26■□□□□ 0.67
BRCA1-228ENST00000618469 EHD4Q9H223 541 aa19.26■□□□□ 0.67
BRCA1-228ENST00000618469 ZCCHC17Q9NP64 241 aaKnown RBP19.26■□□□□ 0.67
BRCA1-228ENST00000618469 MCM9Q9NXL9 1143 aa19.26■□□□□ 0.67
BRCA1-228ENST00000618469 SERPINB13Q9UIV8 391 aa19.26■□□□□ 0.67
BRCA1-228ENST00000618469 AFG3L2Q9Y4W6 797 aa19.26■□□□□ 0.67
BRCA1-228ENST00000618469 MYH8P13535 1937 aa19.25■□□□□ 0.67
BRCA1-228ENST00000618469 A0A0G2JLL6 359 aaPredicted RBP19.25■□□□□ 0.67
BRCA1-228ENST00000618469 DLL1O00548 723 aa19.25■□□□□ 0.67
BRCA1-228ENST00000618469 PRKAB2O43741 272 aa19.25■□□□□ 0.67
BRCA1-228ENST00000618469 IGHDP01880 384 aa19.25■□□□□ 0.67
BRCA1-228ENST00000618469 POLR3DP05423 398 aaPredicted RBP19.25■□□□□ 0.67
BRCA1-228ENST00000618469 MOGSQ13724 837 aa19.25■□□□□ 0.67
BRCA1-228ENST00000618469 PRRT2Q7Z6L0 340 aaPredicted RBP19.25■□□□□ 0.67
BRCA1-228ENST00000618469 TRIM47Q96LD4 638 aa19.25■□□□□ 0.67
BRCA1-228ENST00000618469 PUS7LQ9H0K6 701 aaKnown RBP19.25■□□□□ 0.67
BRCA1-228ENST00000618469 DCP1AQ9NPI6 582 aaPredicted RBP19.25■□□□□ 0.67
BRCA1-228ENST00000618469 PSMC4P43686 418 aa19.24■□□□□ 0.67
BRCA1-228ENST00000618469 SHROOM1Q2M3G4 852 aaPredicted RBP19.24■□□□□ 0.67
BRCA1-228ENST00000618469 GADL1Q6ZQY3 521 aa19.24■□□□□ 0.67
BRCA1-228ENST00000618469 ANKRD23Q86SG2 305 aa19.24■□□□□ 0.67
BRCA1-228ENST00000618469 SLC17A8Q8NDX2 589 aa19.24■□□□□ 0.67
BRCA1-228ENST00000618469 APPBP2Q92624 585 aa19.24■□□□□ 0.67
BRCA1-228ENST00000618469 FSD1Q9BTV5 496 aa19.24■□□□□ 0.67
BRCA1-228ENST00000618469 BIN2Q9UBW5 565 aaPredicted RBP19.24■□□□□ 0.67
BRCA1-228ENST00000618469 PDHXO00330 501 aa19.23■□□□□ 0.67
BRCA1-228ENST00000618469 RNF113AO15541 343 aaKnown RBP19.23■□□□□ 0.67
BRCA1-228ENST00000618469 ZFYP08048 801 aaPredicted RBP19.23■□□□□ 0.67
BRCA1-228ENST00000618469 ASNSP08243 561 aa19.23■□□□□ 0.67
BRCA1-228ENST00000618469 OSBPP22059 807 aa19.23■□□□□ 0.67
BRCA1-228ENST00000618469 PLCD1P51178 756 aa19.23■□□□□ 0.67
BRCA1-228ENST00000618469 EVX2Q03828 476 aa19.23■□□□□ 0.67
BRCA1-228ENST00000618469 ZBTB21Q9ULJ3 1066 aa19.23■□□□□ 0.67
BRCA1-228ENST00000618469 SLC4A4Q9Y6R1 1079 aa19.23■□□□□ 0.67
BRCA1-228ENST00000618469 USP17L5A8MUK1 530 aa19.22■□□□□ 0.67
BRCA1-228ENST00000618469 FMNL1O95466 1100 aaPredicted RBP19.22■□□□□ 0.67
BRCA1-228ENST00000618469 CYP2D6P10635 497 aa19.22■□□□□ 0.67
BRCA1-228ENST00000618469 CCL5P13501 91 aa19.22■□□□□ 0.67
BRCA1-228ENST00000618469 PDE1AP54750 535 aa19.22■□□□□ 0.67
BRCA1-228ENST00000618469 JAG1P78504 1218 aa19.22■□□□□ 0.67
BRCA1-228ENST00000618469 SPP2Q13103 211 aa19.22■□□□□ 0.67
BRCA1-228ENST00000618469 LRRFIP1Q32MZ4 808 aaKnown RBP19.22■□□□□ 0.67
BRCA1-228ENST00000618469 ZNF280CQ8ND82 737 aa19.22■□□□□ 0.67
BRCA1-228ENST00000618469 RAET1EQ8TD07 263 aa19.22■□□□□ 0.67
BRCA1-228ENST00000618469 TBC1D2Q9BYX2 928 aa19.22■□□□□ 0.67
BRCA1-228ENST00000618469 AS3MTQ9HBK9 375 aa19.22■□□□□ 0.67
BRCA1-228ENST00000618469 ATP8A2Q9NTI2 1148 aa19.22■□□□□ 0.67
BRCA1-228ENST00000618469 SRRDQ9UH36 339 aa19.22■□□□□ 0.67
BRCA1-228ENST00000618469 RANBP2P49792 3224 aaKnown RBP19.21■□□□□ 0.67
BRCA1-228ENST00000618469 GRK4P32298 578 aa19.21■□□□□ 0.67
BRCA1-228ENST00000618469 TATDN1Q6P1N9 297 aa19.21■□□□□ 0.67
BRCA1-228ENST00000618469 C17orf99Q6UX52 265 aa19.21■□□□□ 0.67
BRCA1-228ENST00000618469 FASTKD5Q7L8L6 764 aaKnown RBP19.21■□□□□ 0.67
BRCA1-228ENST00000618469 CHD1LQ86WJ1 897 aa19.21■□□□□ 0.67
BRCA1-228ENST00000618469 OSBP2Q969R2 916 aa19.21■□□□□ 0.67
BRCA1-228ENST00000618469 DDRGK1Q96HY6 314 aa19.21■□□□□ 0.67
BRCA1-228ENST00000618469 PARK7Q99497 189 aaKnown RBP19.21■□□□□ 0.67
BRCA1-228ENST00000618469 RNF208Q9H0X6 261 aa19.21■□□□□ 0.67
BRCA1-228ENST00000618469 STAP2Q9UGK3 403 aa19.21■□□□□ 0.67
BRCA1-228ENST00000618469 GH2P01242 217 aa19.2■□□□□ 0.66
BRCA1-228ENST00000618469 SHMT1P34896 483 aa19.2■□□□□ 0.66
BRCA1-228ENST00000618469 HMGCS2P54868 508 aa19.2■□□□□ 0.66
BRCA1-228ENST00000618469 NUCB1Q02818 461 aa19.2■□□□□ 0.66
BRCA1-228ENST00000618469 GPAT2Q6NUI2 795 aa19.2■□□□□ 0.66
BRCA1-228ENST00000618469 AMOTL1Q8IY63 956 aa19.2■□□□□ 0.66
BRCA1-228ENST00000618469 GINM1Q9NU53 330 aa19.2■□□□□ 0.66
BRCA1-228ENST00000618469 MYPNQ86TC9 1320 aa19.2■□□□□ 0.66
BRCA1-228ENST00000618469 M0R2C6 588 aa19.19■□□□□ 0.66
BRCA1-228ENST00000618469 SOX1O00570 391 aaPredicted RBP19.19■□□□□ 0.66
BRCA1-228ENST00000618469 GPAA1O43292 621 aa19.19■□□□□ 0.66
BRCA1-228ENST00000618469 GABPAQ06546 454 aa19.19■□□□□ 0.66
BRCA1-228ENST00000618469 MTMR2Q13614 643 aa19.19■□□□□ 0.66
BRCA1-228ENST00000618469 CERKLQ49MI3 558 aaPredicted RBP19.19■□□□□ 0.66
BRCA1-228ENST00000618469 STRBPQ96SI9 672 aaKnown RBP19.19■□□□□ 0.66
BRCA1-228ENST00000618469 AGTPBP1Q9UPW5 1226 aa19.19■□□□□ 0.66
BRCA1-228ENST00000618469 MGAMO43451 1857 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms