RNA–Protein interactions for RNA: ENST00000618361.4

CBWD1-227, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-227ENST00000618361 DOCK2Q92608 1830 aa9.69□□□□□ -0.86
CBWD1-227ENST00000618361 TXNRD2Q9NNW7 524 aa9.69□□□□□ -0.86
CBWD1-227ENST00000618361 CEP126Q9P2H0 1117 aa9.69□□□□□ -0.86
CBWD1-227ENST00000618361 SPTBN5Q9NRC6 3674 aaKnown RBP9.69□□□□□ -0.86
CBWD1-227ENST00000618361 DOCK3Q8IZD9 2030 aa9.68□□□□□ -0.86
CBWD1-227ENST00000618361 ASNSP08243 561 aa9.68□□□□□ -0.86
CBWD1-227ENST00000618361 HOXC6P09630 235 aa9.68□□□□□ -0.86
CBWD1-227ENST00000618361 PHKA1P46020 1223 aa9.68□□□□□ -0.86
CBWD1-227ENST00000618361 RTP1P59025 263 aa9.68□□□□□ -0.86
CBWD1-227ENST00000618361 MAP3K12Q12852 859 aa9.68□□□□□ -0.86
CBWD1-227ENST00000618361 POLA2Q14181 598 aa9.68□□□□□ -0.86
CBWD1-227ENST00000618361 CCL14Q16627 93 aa9.68□□□□□ -0.86
CBWD1-227ENST00000618361 Q3C1V9 767 aa9.68□□□□□ -0.86
CBWD1-227ENST00000618361 C9orf50Q5SZB4 431 aa9.68□□□□□ -0.86
CBWD1-227ENST00000618361 C1orf53Q5VUE5 145 aa9.68□□□□□ -0.86
CBWD1-227ENST00000618361 IL27Q8NEV9 243 aa9.68□□□□□ -0.86
CBWD1-227ENST00000618361 ATXN2LQ8WWM7 1075 aaKnown RBP9.68□□□□□ -0.86
CBWD1-227ENST00000618361 EDC3Q96F86 508 aaKnown RBP9.68□□□□□ -0.86
CBWD1-227ENST00000618361 USP44Q9H0E7 712 aa9.68□□□□□ -0.86
CBWD1-227ENST00000618361 PLXNB2O15031 1838 aa9.68□□□□□ -0.86
CBWD1-227ENST00000618361 PTPRCP08575 1304 aa9.67□□□□□ -0.86
CBWD1-227ENST00000618361 AK9Q5TCS8 1911 aa9.67□□□□□ -0.86
CBWD1-227ENST00000618361 LDHCP07864 332 aa9.67□□□□□ -0.86
CBWD1-227ENST00000618361 ATN1P54259 1190 aaPredicted RBP9.67□□□□□ -0.86
CBWD1-227ENST00000618361 CCNA1P78396 465 aa9.67□□□□□ -0.86
CBWD1-227ENST00000618361 MTMR2Q13614 643 aa9.67□□□□□ -0.86
CBWD1-227ENST00000618361 RRP1BQ14684 758 aaKnown RBP9.67□□□□□ -0.86
CBWD1-227ENST00000618361 SNX17Q15036 470 aa9.67□□□□□ -0.86
CBWD1-227ENST00000618361 CCDC102BQ68D86 513 aa9.67□□□□□ -0.86
CBWD1-227ENST00000618361 SLC39A5Q6ZMH5 540 aa9.67□□□□□ -0.86
CBWD1-227ENST00000618361 ARRDC4Q8NCT1 418 aa9.67□□□□□ -0.86
CBWD1-227ENST00000618361 C1QTNF1Q9BXJ1 281 aa9.67□□□□□ -0.86
CBWD1-227ENST00000618361 PORCNQ9H237 461 aa9.67□□□□□ -0.86
CBWD1-227ENST00000618361 DHX36Q9H2U1 1008 aaKnown RBP9.67□□□□□ -0.86
CBWD1-227ENST00000618361 CWC22Q9HCG8 908 aaKnown RBP9.67□□□□□ -0.86
CBWD1-227ENST00000618361 PI4KBQ9UBF8 816 aa9.67□□□□□ -0.86
CBWD1-227ENST00000618361 ABCF2Q9UG63 623 aa9.67□□□□□ -0.86
CBWD1-227ENST00000618361 RABGAP1Q9Y3P9 1069 aa9.67□□□□□ -0.86
CBWD1-227ENST00000618361 ARIH1Q9Y4X5 557 aaPredicted RBP9.67□□□□□ -0.86
CBWD1-227ENST00000618361 SLC15A5A6NIM6 579 aa9.66□□□□□ -0.86
CBWD1-227ENST00000618361 FAM196BA6NMK8 535 aa9.66□□□□□ -0.86
CBWD1-227ENST00000618361 USP17L10C9JJH3 530 aa9.66□□□□□ -0.86
CBWD1-227ENST00000618361 IGHA2P01877 340 aa9.66□□□□□ -0.86
CBWD1-227ENST00000618361 IL15P40933 162 aaPredicted RBP9.66□□□□□ -0.86
CBWD1-227ENST00000618361 GSTO1P78417 241 aa9.66□□□□□ -0.86
CBWD1-227ENST00000618361 MECOMQ03112 1051 aa9.66□□□□□ -0.86
CBWD1-227ENST00000618361 RASGRF1Q13972 1273 aa9.66□□□□□ -0.86
CBWD1-227ENST00000618361 ERICH6Q7L0X2 663 aa9.66□□□□□ -0.86
CBWD1-227ENST00000618361 METTL16Q86W50 562 aaKnown RBP9.66□□□□□ -0.86
CBWD1-227ENST00000618361 BADQ92934 168 aa9.66□□□□□ -0.86
CBWD1-227ENST00000618361 RAPGEFL1Q9UHV5 662 aa9.66□□□□□ -0.86
CBWD1-227ENST00000618361 MAST2Q6P0Q8 1798 aa9.65□□□□□ -0.86
CBWD1-227ENST00000618361 PTPREP23469 700 aa9.65□□□□□ -0.86
CBWD1-227ENST00000618361 CNGA1P29973 690 aa9.65□□□□□ -0.86
CBWD1-227ENST00000618361 MRPS5P82675 430 aaKnown RBP9.65□□□□□ -0.86
CBWD1-227ENST00000618361 ATP2B2Q01814 1243 aa9.65□□□□□ -0.86
CBWD1-227ENST00000618361 POTEEQ6S8J3 1075 aa9.65□□□□□ -0.86
CBWD1-227ENST00000618361 LBX2Q6XYB7 198 aa9.65□□□□□ -0.86
CBWD1-227ENST00000618361 FOXP4Q8IVH2 680 aaPredicted RBP9.65□□□□□ -0.86
CBWD1-227ENST00000618361 ASB2Q96Q27 587 aa9.65□□□□□ -0.86
CBWD1-227ENST00000618361 FLRT1Q9NZU1 646 aa9.65□□□□□ -0.86
CBWD1-227ENST00000618361 ATP11BQ9Y2G3 1177 aa9.65□□□□□ -0.86
CBWD1-227ENST00000618361 LAMA2P24043 3122 aaKnown RBP9.64□□□□□ -0.87
CBWD1-227ENST00000618361 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.64□□□□□ -0.87
CBWD1-227ENST00000618361 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.64□□□□□ -0.87
CBWD1-227ENST00000618361 KBTBD13C9JR72 458 aa9.64□□□□□ -0.87
CBWD1-227ENST00000618361 PEX10O60683 326 aa9.64□□□□□ -0.87
CBWD1-227ENST00000618361 GRB14Q14449 540 aa9.64□□□□□ -0.87
CBWD1-227ENST00000618361 OLFML2BQ68BL8 750 aa9.64□□□□□ -0.87
CBWD1-227ENST00000618361 USP17L2Q6R6M4 530 aa9.64□□□□□ -0.87
CBWD1-227ENST00000618361 ZNF384Q8TF68 577 aa9.64□□□□□ -0.87
CBWD1-227ENST00000618361 NSUN4Q96CB9 384 aaKnown RBP9.64□□□□□ -0.87
CBWD1-227ENST00000618361 C12orf42Q96LP6 360 aa9.64□□□□□ -0.87
CBWD1-227ENST00000618361 RNPC3Q96LT9 517 aaKnown RBP9.64□□□□□ -0.87
CBWD1-227ENST00000618361 GAS2L1Q99501 681 aaPredicted RBP9.64□□□□□ -0.87
CBWD1-227ENST00000618361 PAGR1Q9BTK6 254 aa9.64□□□□□ -0.87
CBWD1-227ENST00000618361 PRDM5Q9NQX1 630 aaPredicted RBP9.64□□□□□ -0.87
CBWD1-227ENST00000618361 PDLIM7Q9NR12 457 aa9.64□□□□□ -0.87
CBWD1-227ENST00000618361 EMILIN3Q9NT22 766 aa9.64□□□□□ -0.87
CBWD1-227ENST00000618361 FOXD4L1Q9NU39 408 aa9.64□□□□□ -0.87
CBWD1-227ENST00000618361 TACC3Q9Y6A5 838 aa9.64□□□□□ -0.87
CBWD1-227ENST00000618361 PRUNE2Q8WUY3 3088 aa9.64□□□□□ -0.87
CBWD1-227ENST00000618361 TRIM43BA6NCK2 446 aa9.63□□□□□ -0.87
CBWD1-227ENST00000618361 USP17L15C9J2P7 530 aa9.63□□□□□ -0.87
CBWD1-227ENST00000618361 USP17L13C9JLJ4 530 aa9.63□□□□□ -0.87
CBWD1-227ENST00000618361 USP17L11C9JVI0 530 aa9.63□□□□□ -0.87
CBWD1-227ENST00000618361 USP17L18D6R9N7 530 aa9.63□□□□□ -0.87
CBWD1-227ENST00000618361 USP17L22D6RA61 530 aa9.63□□□□□ -0.87
CBWD1-227ENST00000618361 USP17L17D6RBQ6 530 aa9.63□□□□□ -0.87
CBWD1-227ENST00000618361 USP17L19D6RCP7 530 aa9.63□□□□□ -0.87
CBWD1-227ENST00000618361 USP17L20D6RJB6 530 aa9.63□□□□□ -0.87
CBWD1-227ENST00000618361 CNMDO75829 334 aa9.63□□□□□ -0.87
CBWD1-227ENST00000618361 CYBAP13498 195 aa9.63□□□□□ -0.87
CBWD1-227ENST00000618361 USP17L24Q0WX57 530 aa9.63□□□□□ -0.87
CBWD1-227ENST00000618361 MVPQ14764 893 aaKnown RBP9.63□□□□□ -0.87
CBWD1-227ENST00000618361 GRIN2CQ14957 1233 aa9.63□□□□□ -0.87
CBWD1-227ENST00000618361 TRIM60Q495X7 471 aa9.63□□□□□ -0.87
CBWD1-227ENST00000618361 AKNAD1Q5T1N1 836 aa9.63□□□□□ -0.87
CBWD1-227ENST00000618361 GJC2Q5T442 439 aaPredicted RBP9.63□□□□□ -0.87
CBWD1-227ENST00000618361 MRPL50Q8N5N7 158 aaKnown RBP9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms