RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 CRACR2BQ8N4Y2 399 aaPredicted RBP20.32■□□□□ 0.84
CNOT3-209ENST00000617930 BICD2Q8TD16 824 aa20.32■□□□□ 0.84
CNOT3-209ENST00000617930 NUP133Q8WUM0 1156 aa20.32■□□□□ 0.84
CNOT3-209ENST00000617930 NUP62CLQ9H1M0 184 aa20.32■□□□□ 0.84
CNOT3-209ENST00000617930 PCDHA7Q9UN72 937 aa20.32■□□□□ 0.84
CNOT3-209ENST00000617930 ECM29Q5VYK3 1845 aa20.32■□□□□ 0.84
CNOT3-209ENST00000617930 STK36Q9NRP7 1315 aa20.32■□□□□ 0.84
CNOT3-209ENST00000617930 ERICH2A1L162 156 aa20.32■□□□□ 0.84
CNOT3-209ENST00000617930 ORC4O43929 436 aa20.32■□□□□ 0.84
CNOT3-209ENST00000617930 OFD1O75665 1012 aa20.32■□□□□ 0.84
CNOT3-209ENST00000617930 PPP4CP60510 307 aa20.32■□□□□ 0.84
CNOT3-209ENST00000617930 RBM43Q6ZSC3 357 aaKnown RBP20.32■□□□□ 0.84
CNOT3-209ENST00000617930 CKAP2LQ8IYA6 745 aa20.32■□□□□ 0.84
CNOT3-209ENST00000617930 CLSTN2Q9H4D0 955 aa20.32■□□□□ 0.84
CNOT3-209ENST00000617930 MCM9Q9NXL9 1143 aa20.32■□□□□ 0.84
CNOT3-209ENST00000617930 SSRP1Q08945 709 aaKnown RBP20.31■□□□□ 0.84
CNOT3-209ENST00000617930 FUT2Q10981 343 aa20.31■□□□□ 0.84
CNOT3-209ENST00000617930 TROAPQ12815 778 aa20.31■□□□□ 0.84
CNOT3-209ENST00000617930 TMED8Q6PL24 325 aaPredicted RBP20.31■□□□□ 0.84
CNOT3-209ENST00000617930 SYNE3Q6ZMZ3 975 aa20.31■□□□□ 0.84
CNOT3-209ENST00000617930 CCAR1Q8IX12 1150 aaKnown RBP20.31■□□□□ 0.84
CNOT3-209ENST00000617930 RGS22Q8NE09 1264 aa20.31■□□□□ 0.84
CNOT3-209ENST00000617930 ENGASEQ8NFI3 743 aa20.31■□□□□ 0.84
CNOT3-209ENST00000617930 MROH7-TTC4A0A0A0MT08 1334 aa20.31■□□□□ 0.84
CNOT3-209ENST00000617930 C12orf60Q5U649 245 aa20.31■□□□□ 0.84
CNOT3-209ENST00000617930 CPLX2Q6PUV4 134 aaKnown RBP20.31■□□□□ 0.84
CNOT3-209ENST00000617930 BRAPQ7Z569 592 aa20.31■□□□□ 0.84
CNOT3-209ENST00000617930 FBXW7Q969H0 707 aa20.31■□□□□ 0.84
CNOT3-209ENST00000617930 DYNLL2Q96FJ2 89 aa20.31■□□□□ 0.84
CNOT3-209ENST00000617930 EYA3Q99504 573 aa20.31■□□□□ 0.84
CNOT3-209ENST00000617930 ARPP21Q9UBL0 812 aaPredicted RBP20.31■□□□□ 0.84
CNOT3-209ENST00000617930 ZKSCAN5Q9Y2L8 839 aa20.31■□□□□ 0.84
CNOT3-209ENST00000617930 UTRNP46939 3433 aa20.31■□□□□ 0.84
CNOT3-209ENST00000617930 YDJCA8MPS7 323 aa20.3■□□□□ 0.84
CNOT3-209ENST00000617930 ECE2O60344 883 aa20.3■□□□□ 0.84
CNOT3-209ENST00000617930 POLR3EQ9NVU0 708 aa20.3■□□□□ 0.84
CNOT3-209ENST00000617930 LAMB1P07942 1786 aa20.29■□□□□ 0.84
CNOT3-209ENST00000617930 F8W031 263 aaPredicted RBP20.29■□□□□ 0.84
CNOT3-209ENST00000617930 ZNF500O60304 480 aaPredicted RBP20.29■□□□□ 0.84
CNOT3-209ENST00000617930 PCP11498 1178 aaKnown RBP20.29■□□□□ 0.84
CNOT3-209ENST00000617930 U2AF2P26368 475 aaKnown RBP eCLIP20.29■□□□□ 0.84
CNOT3-209ENST00000617930 RCAN1P53805 252 aa20.29■□□□□ 0.84
CNOT3-209ENST00000617930 KIAA2012Q0VF49 1180 aa20.29■□□□□ 0.84
CNOT3-209ENST00000617930 TGFBRAP1Q8WUH2 860 aa20.29■□□□□ 0.84
CNOT3-209ENST00000617930 TMX4Q9H1E5 349 aaPredicted RBP20.29■□□□□ 0.84
CNOT3-209ENST00000617930 DDX19AQ9NUU7 478 aaKnown RBP20.29■□□□□ 0.84
CNOT3-209ENST00000617930 PTMAP06454 111 aaKnown RBP20.29■□□□□ 0.84
CNOT3-209ENST00000617930 MAP3K11Q16584 847 aa20.29■□□□□ 0.84
CNOT3-209ENST00000617930 RCSD1Q6JBY9 416 aa20.29■□□□□ 0.84
CNOT3-209ENST00000617930 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.29■□□□□ 0.84
CNOT3-209ENST00000617930 TNMDQ9H2S6 317 aa20.29■□□□□ 0.84
CNOT3-209ENST00000617930 KCNJ14Q9UNX9 436 aa20.29■□□□□ 0.84
CNOT3-209ENST00000617930 GAKO14976 1311 aa20.28■□□□□ 0.84
CNOT3-209ENST00000617930 DDX60LQ5H9U9 1706 aaKnown RBP20.28■□□□□ 0.84
CNOT3-209ENST00000617930 PLEKHA8P1O95397 391 aa20.28■□□□□ 0.84
CNOT3-209ENST00000617930 POLD1P28340 1107 aa20.28■□□□□ 0.84
CNOT3-209ENST00000617930 ME1P48163 572 aa20.28■□□□□ 0.84
CNOT3-209ENST00000617930 PLCD1P51178 756 aa20.28■□□□□ 0.84
CNOT3-209ENST00000617930 IFIT1BQ5T764 474 aaKnown RBP20.28■□□□□ 0.84
CNOT3-209ENST00000617930 TBC1D22AQ8WUA7 517 aa20.28■□□□□ 0.84
CNOT3-209ENST00000617930 IL17RBQ9NRM6 502 aa20.28■□□□□ 0.84
CNOT3-209ENST00000617930 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.28■□□□□ 0.84
CNOT3-209ENST00000617930 PCDHAC2Q9Y5I4 1007 aa20.28■□□□□ 0.84
CNOT3-209ENST00000617930 MRVI1Q9Y6F6 885 aa20.28■□□□□ 0.84
CNOT3-209ENST00000617930 GPR75-ASB3A0A0A6YYF3 556 aa20.27■□□□□ 0.84
CNOT3-209ENST00000617930 BTDP43251 543 aa20.27■□□□□ 0.84
CNOT3-209ENST00000617930 RHBDL3P58872 404 aa20.27■□□□□ 0.84
CNOT3-209ENST00000617930 PKN1Q16512 942 aa20.27■□□□□ 0.84
CNOT3-209ENST00000617930 DAGLAQ9Y4D2 1042 aa20.27■□□□□ 0.84
CNOT3-209ENST00000617930 hCG_1642624A0A1W2PR95 340 aa20.27■□□□□ 0.84
CNOT3-209ENST00000617930 BTBD18B2RXH4 712 aa20.27■□□□□ 0.84
CNOT3-209ENST00000617930 AP5Z1O43299 807 aa20.27■□□□□ 0.84
CNOT3-209ENST00000617930 WDHD1O75717 1129 aaPredicted RBP20.27■□□□□ 0.84
CNOT3-209ENST00000617930 USP5P45974 858 aa20.27■□□□□ 0.84
CNOT3-209ENST00000617930 TGFB2P61812 414 aa20.27■□□□□ 0.84
CNOT3-209ENST00000617930 GSTO1P78417 241 aa20.27■□□□□ 0.84
CNOT3-209ENST00000617930 CCDC93Q567U6 631 aa20.27■□□□□ 0.84
CNOT3-209ENST00000617930 DACT2Q5SW24 774 aa20.27■□□□□ 0.84
CNOT3-209ENST00000617930 AXDND1Q5T1B0 1012 aaPredicted RBP20.27■□□□□ 0.84
CNOT3-209ENST00000617930 ANO1Q5XXA6 986 aa20.27■□□□□ 0.84
CNOT3-209ENST00000617930 PODNQ7Z5L7 613 aa20.27■□□□□ 0.84
CNOT3-209ENST00000617930 SLC44A5Q8NCS7 719 aa20.27■□□□□ 0.84
CNOT3-209ENST00000617930 MAP3K14Q99558 947 aa20.27■□□□□ 0.84
CNOT3-209ENST00000617930 PPP1R1BQ9UD71 204 aaPredicted RBP20.27■□□□□ 0.84
CNOT3-209ENST00000617930 SRCAPQ6ZRS2 3230 aa20.26■□□□□ 0.83
CNOT3-209ENST00000617930 NAV1Q8NEY1 1877 aa20.26■□□□□ 0.83
CNOT3-209ENST00000617930 IGSF3O75054 1194 aa20.26■□□□□ 0.83
CNOT3-209ENST00000617930 YEATS4O95619 227 aa20.26■□□□□ 0.83
CNOT3-209ENST00000617930 TYRO3Q06418 890 aa20.26■□□□□ 0.83
CNOT3-209ENST00000617930 PTPAQ15257 358 aa20.26■□□□□ 0.83
CNOT3-209ENST00000617930 CC2D2BQ6DHV5 1058 aa20.26■□□□□ 0.83
CNOT3-209ENST00000617930 ADALQ6DHV7 355 aa20.26■□□□□ 0.83
CNOT3-209ENST00000617930 IQCA1Q86XH1 822 aa20.26■□□□□ 0.83
CNOT3-209ENST00000617930 MAPKAPK5Q8IW41 473 aa20.26■□□□□ 0.83
CNOT3-209ENST00000617930 KLHL34Q8N239 644 aa20.26■□□□□ 0.83
CNOT3-209ENST00000617930 FAM163AQ96GL9 167 aaPredicted RBP20.26■□□□□ 0.83
CNOT3-209ENST00000617930 ZNF277Q9NRM2 450 aaPredicted RBP20.26■□□□□ 0.83
CNOT3-209ENST00000617930 SPTLC2O15270 562 aa20.26■□□□□ 0.83
CNOT3-209ENST00000617930 MMP1P03956 469 aa20.26■□□□□ 0.83
CNOT3-209ENST00000617930 SCNN1DP51172 638 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms