RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 LSP1P33241 339 aa8.25□□□□□ -1.09
PDE6A-205ENST00000617647 PSMC4P43686 418 aa8.25□□□□□ -1.09
PDE6A-205ENST00000617647 STX17P56962 302 aa8.25□□□□□ -1.09
PDE6A-205ENST00000617647 MTF1Q14872 753 aa8.25□□□□□ -1.09
PDE6A-205ENST00000617647 BZW1Q7L1Q6 419 aaKnown RBP8.25□□□□□ -1.09
PDE6A-205ENST00000617647 TRMT44Q8IYL2 757 aaKnown RBP8.25□□□□□ -1.09
PDE6A-205ENST00000617647 FUKQ8N0W3 1084 aa8.25□□□□□ -1.09
PDE6A-205ENST00000617647 C8orf58Q8NAV2 365 aa8.25□□□□□ -1.09
PDE6A-205ENST00000617647 PROCA1Q8NCQ7 364 aaPredicted RBP8.25□□□□□ -1.09
PDE6A-205ENST00000617647 RPGRIP1Q96KN7 1286 aa8.25□□□□□ -1.09
PDE6A-205ENST00000617647 DCAF8L1A6NGE4 600 aa8.25□□□□□ -1.09
PDE6A-205ENST00000617647 BACH1O14867 736 aa8.25□□□□□ -1.09
PDE6A-205ENST00000617647 ATP6V1G1O75348 118 aa8.25□□□□□ -1.09
PDE6A-205ENST00000617647 GLRX3O76003 335 aaKnown RBP8.25□□□□□ -1.09
PDE6A-205ENST00000617647 PARP1P09874 1014 aaKnown RBP8.25□□□□□ -1.09
PDE6A-205ENST00000617647 ROR2Q01974 943 aaKnown RBP8.25□□□□□ -1.09
PDE6A-205ENST00000617647 KRT32Q14532 448 aa8.25□□□□□ -1.09
PDE6A-205ENST00000617647 ACCSLQ4AC99 568 aa8.25□□□□□ -1.09
PDE6A-205ENST00000617647 CREB3L3Q68CJ9 461 aa8.25□□□□□ -1.09
PDE6A-205ENST00000617647 UNC5CLQ8IV45 518 aa8.25□□□□□ -1.09
PDE6A-205ENST00000617647 CLASP1Q7Z460 1538 aa8.24□□□□□ -1.09
PDE6A-205ENST00000617647 FCHSD2O94868 740 aa8.24□□□□□ -1.09
PDE6A-205ENST00000617647 NDUFA8P51970 172 aa8.24□□□□□ -1.09
PDE6A-205ENST00000617647 USP14P54578 494 aa8.24□□□□□ -1.09
PDE6A-205ENST00000617647 C2orf54Q08AI8 447 aa8.24□□□□□ -1.09
PDE6A-205ENST00000617647 ADCK5Q3MIX3 580 aa8.24□□□□□ -1.09
PDE6A-205ENST00000617647 CCDC197Q8NCU1 140 aa8.24□□□□□ -1.09
PDE6A-205ENST00000617647 TATDN2Q93075 761 aa8.24□□□□□ -1.09
PDE6A-205ENST00000617647 JAKMIP2Q96AA8 810 aa8.24□□□□□ -1.09
PDE6A-205ENST00000617647 MRPL44Q9H9J2 332 aaKnown RBP8.24□□□□□ -1.09
PDE6A-205ENST00000617647 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.24□□□□□ -1.09
PDE6A-205ENST00000617647 SCOCQ9UIL1 159 aa8.24□□□□□ -1.09
PDE6A-205ENST00000617647 CEP131Q9UPN4 1083 aa8.24□□□□□ -1.09
PDE6A-205ENST00000617647 L3MBTL1Q9Y468 752 aa8.24□□□□□ -1.09
PDE6A-205ENST00000617647 SESN3P58005 492 aa8.24□□□□□ -1.09
PDE6A-205ENST00000617647 NFE2L2Q16236 605 aa8.24□□□□□ -1.09
PDE6A-205ENST00000617647 AKNAD1Q5T1N1 836 aa8.24□□□□□ -1.09
PDE6A-205ENST00000617647 NBPF14Q5TI25 921 aa8.24□□□□□ -1.09
PDE6A-205ENST00000617647 NUTM2DQ5VT03 806 aaPredicted RBP8.24□□□□□ -1.09
PDE6A-205ENST00000617647 SSH2Q76I76 1423 aa8.24□□□□□ -1.09
PDE6A-205ENST00000617647 CACNA2D4Q7Z3S7 1137 aa8.24□□□□□ -1.09
PDE6A-205ENST00000617647 NUTM2AQ8IVF1 878 aaPredicted RBP8.24□□□□□ -1.09
PDE6A-205ENST00000617647 DPF2Q92785 391 aa8.24□□□□□ -1.09
PDE6A-205ENST00000617647 RAB21Q9UL25 225 aa8.24□□□□□ -1.09
PDE6A-205ENST00000617647 FAM135BQ49AJ0 1406 aa8.24□□□□□ -1.09
PDE6A-205ENST00000617647 USO1O60763 962 aaKnown RBP8.24□□□□□ -1.09
PDE6A-205ENST00000617647 LGR5O75473 907 aa8.24□□□□□ -1.09
PDE6A-205ENST00000617647 SYF2O95926 243 aaKnown RBP8.24□□□□□ -1.09
PDE6A-205ENST00000617647 ZFYP08048 801 aaPredicted RBP8.24□□□□□ -1.09
PDE6A-205ENST00000617647 DEUP1Q05D60 604 aa8.24□□□□□ -1.09
PDE6A-205ENST00000617647 MAP7Q14244 749 aa8.24□□□□□ -1.09
PDE6A-205ENST00000617647 CWF19L1Q69YN2 538 aaKnown RBP8.24□□□□□ -1.09
PDE6A-205ENST00000617647 CCDC155Q8N6L0 562 aa8.24□□□□□ -1.09
PDE6A-205ENST00000617647 UBLCP1Q8WVY7 318 aaPredicted RBP8.24□□□□□ -1.09
PDE6A-205ENST00000617647 ZMAT2Q96NC0 199 aaKnown RBP8.24□□□□□ -1.09
PDE6A-205ENST00000617647 KCND1Q9NSA2 647 aa8.24□□□□□ -1.09
PDE6A-205ENST00000617647 C15orf41Q9Y2V0 281 aa8.24□□□□□ -1.09
PDE6A-205ENST00000617647 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.24□□□□□ -1.09
PDE6A-205ENST00000617647 SRGAP2O75044 1071 aa8.23□□□□□ -1.09
PDE6A-205ENST00000617647 TEFQ10587 303 aa8.23□□□□□ -1.09
PDE6A-205ENST00000617647 PRPF4BQ13523 1007 aaKnown RBP8.23□□□□□ -1.09
PDE6A-205ENST00000617647 RINLQ6ZS11 566 aa8.23□□□□□ -1.09
PDE6A-205ENST00000617647 GOLPH3LQ9H4A5 285 aa8.23□□□□□ -1.09
PDE6A-205ENST00000617647 SLC39A2Q9NP94 309 aa8.23□□□□□ -1.09
PDE6A-205ENST00000617647 TLDC2A0PJX2 215 aa8.23□□□□□ -1.09
PDE6A-205ENST00000617647 OPLAHO14841 1288 aa8.23□□□□□ -1.09
PDE6A-205ENST00000617647 ATP6V1G2O95670 118 aa8.23□□□□□ -1.09
PDE6A-205ENST00000617647 TFRCP02786 760 aaKnown RBP8.23□□□□□ -1.09
PDE6A-205ENST00000617647 PIP4K2AP48426 406 aaPredicted RBP8.23□□□□□ -1.09
PDE6A-205ENST00000617647 SLC7A5Q01650 507 aa8.23□□□□□ -1.09
PDE6A-205ENST00000617647 PAK2Q13177 524 aa8.23□□□□□ -1.09
PDE6A-205ENST00000617647 Q4G0T1 1027 aa8.23□□□□□ -1.09
PDE6A-205ENST00000617647 Q6ZUG5 572 aa8.23□□□□□ -1.09
PDE6A-205ENST00000617647 TMTC1Q8IUR5 882 aa8.23□□□□□ -1.09
PDE6A-205ENST00000617647 IFT20Q8IY31 132 aa8.23□□□□□ -1.09
PDE6A-205ENST00000617647 GBP7Q8N8V2 638 aaPredicted RBP8.23□□□□□ -1.09
PDE6A-205ENST00000617647 KLHL29Q96CT2 875 aa8.23□□□□□ -1.09
PDE6A-205ENST00000617647 TTC14Q96N46 770 aa8.23□□□□□ -1.09
PDE6A-205ENST00000617647 TTC21AQ8NDW8 1320 aa8.23□□□□□ -1.09
PDE6A-205ENST00000617647 GMNCA6NCL1 334 aa8.23□□□□□ -1.09
PDE6A-205ENST00000617647 CCT6AP40227 531 aaKnown RBP8.23□□□□□ -1.09
PDE6A-205ENST00000617647 ALS2CLQ60I27 953 aa8.23□□□□□ -1.09
PDE6A-205ENST00000617647 LONP2Q86WA8 852 aa8.23□□□□□ -1.09
PDE6A-205ENST00000617647 GORASP1Q9BQQ3 440 aa8.23□□□□□ -1.09
PDE6A-205ENST00000617647 MAGEC2Q9UBF1 373 aaPredicted RBP8.23□□□□□ -1.09
PDE6A-205ENST00000617647 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.22□□□□□ -1.09
PDE6A-205ENST00000617647 UPP2O95045 317 aa8.22□□□□□ -1.09
PDE6A-205ENST00000617647 EPHB4P54760 987 aa8.22□□□□□ -1.09
PDE6A-205ENST00000617647 CCDC178Q5BJE1 867 aa8.22□□□□□ -1.09
PDE6A-205ENST00000617647 WLSQ5T9L3 541 aa8.22□□□□□ -1.09
PDE6A-205ENST00000617647 CYP26C1Q6V0L0 522 aa8.22□□□□□ -1.09
PDE6A-205ENST00000617647 PPFIBP2Q8ND30 876 aa8.22□□□□□ -1.09
PDE6A-205ENST00000617647 SNRNP27Q8WVK2 155 aaKnown RBP8.22□□□□□ -1.09
PDE6A-205ENST00000617647 NEK1Q96PY6 1258 aa8.22□□□□□ -1.09
PDE6A-205ENST00000617647 PCDHA7Q9UN72 937 aa8.22□□□□□ -1.09
PDE6A-205ENST00000617647 ZNF711Q9Y462 761 aa8.22□□□□□ -1.09
PDE6A-205ENST00000617647 SBNO1A3KN83 1393 aa8.22□□□□□ -1.09
PDE6A-205ENST00000617647 ABCC4O15439 1325 aa8.22□□□□□ -1.09
PDE6A-205ENST00000617647 PTPDC1A2A3K4 754 aa8.22□□□□□ -1.09
PDE6A-205ENST00000617647 DYTNA2CJ06 578 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms