RNA–Protein interactions for RNA: ENST00000617474.1

PTPRT-210, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

TSL 5

Gene PTPRT, Length 4,521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-210ENST00000617474 NCBP1Q09161 790 aaKnown RBP17.29■□□□□ 0.36
PTPRT-210ENST00000617474 MSL1Q68DK7 614 aa17.29■□□□□ 0.36
PTPRT-210ENST00000617474 CARMIL3Q8ND23 1372 aa17.29■□□□□ 0.36
PTPRT-210ENST00000617474 PDE6AP16499 860 aa17.29■□□□□ 0.36
PTPRT-210ENST00000617474 RFC4P35249 363 aa17.29■□□□□ 0.36
PTPRT-210ENST00000617474 PLCD1P51178 756 aa17.29■□□□□ 0.36
PTPRT-210ENST00000617474 RESTQ13127 1097 aa17.29■□□□□ 0.36
PTPRT-210ENST00000617474 GIGYF2Q6Y7W6 1299 aaKnown RBP17.29■□□□□ 0.36
PTPRT-210ENST00000617474 LPIN2Q92539 896 aa17.29■□□□□ 0.36
PTPRT-210ENST00000617474 TFCP2L1Q9NZI6 479 aa17.29■□□□□ 0.36
PTPRT-210ENST00000617474 SAR1BQ9Y6B6 198 aa17.29■□□□□ 0.36
PTPRT-210ENST00000617474 ANKRD13CQ8N6S4 541 aa17.29■□□□□ 0.36
PTPRT-210ENST00000617474 PAF1Q8N7H5 531 aa17.29■□□□□ 0.36
PTPRT-210ENST00000617474 LINC00301Q8NCQ3 95 aa17.29■□□□□ 0.36
PTPRT-210ENST00000617474 ENC1O14682 589 aa17.28■□□□□ 0.36
PTPRT-210ENST00000617474 STXBP4Q6ZWJ1 553 aa17.28■□□□□ 0.36
PTPRT-210ENST00000617474 NGLY1Q96IV0 654 aa17.28■□□□□ 0.36
PTPRT-210ENST00000617474 AATKQ6ZMQ8 1374 aa17.28■□□□□ 0.36
PTPRT-210ENST00000617474 INPP5BP32019 993 aa17.28■□□□□ 0.36
PTPRT-210ENST00000617474 PGBD1Q96JS3 809 aa17.28■□□□□ 0.36
PTPRT-210ENST00000617474 GPCPD1Q9NPB8 672 aa17.28■□□□□ 0.36
PTPRT-210ENST00000617474 A0A1W2PQ27 194 aa17.28■□□□□ 0.36
PTPRT-210ENST00000617474 A0A1W2PQ64 194 aa17.28■□□□□ 0.36
PTPRT-210ENST00000617474 A0A1W2PQD8 194 aa17.28■□□□□ 0.36
PTPRT-210ENST00000617474 PDE8AO60658 829 aa17.28■□□□□ 0.36
PTPRT-210ENST00000617474 LDHBP07195 334 aaKnown RBP17.28■□□□□ 0.36
PTPRT-210ENST00000617474 GSTO1P78417 241 aa17.28■□□□□ 0.36
PTPRT-210ENST00000617474 SLC39A14Q15043 492 aa17.28■□□□□ 0.36
PTPRT-210ENST00000617474 CCDC91Q7Z6B0 441 aa17.28■□□□□ 0.36
PTPRT-210ENST00000617474 C2CD5Q86YS7 1000 aa17.28■□□□□ 0.36
PTPRT-210ENST00000617474 OR8K1Q8NGG5 319 aa17.28■□□□□ 0.36
PTPRT-210ENST00000617474 MAST3O60307 1309 aa17.28■□□□□ 0.36
PTPRT-210ENST00000617474 IGSF1Q8N6C5 1336 aa17.28■□□□□ 0.36
PTPRT-210ENST00000617474 PCDH11XQ9BZA7 1347 aa17.27■□□□□ 0.36
PTPRT-210ENST00000617474 PCDH11YQ9BZA8 1340 aa17.27■□□□□ 0.36
PTPRT-210ENST00000617474 ZMYND10O75800 440 aa17.27■□□□□ 0.36
PTPRT-210ENST00000617474 KIF4AO95239 1232 aa17.27■□□□□ 0.36
PTPRT-210ENST00000617474 CASP14P31944 242 aa17.27■□□□□ 0.36
PTPRT-210ENST00000617474 NELFCDQ8IXH7 590 aa17.27■□□□□ 0.36
PTPRT-210ENST00000617474 BRD3Q15059 726 aa17.27■□□□□ 0.36
PTPRT-210ENST00000617474 CCDC144BQ3MJ40 725 aa17.27■□□□□ 0.36
PTPRT-210ENST00000617474 CCDC174Q6PII3 467 aa17.27■□□□□ 0.36
PTPRT-210ENST00000617474 IFNL3Q8IZI9 196 aa17.27■□□□□ 0.36
PTPRT-210ENST00000617474 SPTLC3Q9NUV7 552 aa17.27■□□□□ 0.36
PTPRT-210ENST00000617474 RRAGAQ7L523 313 aa17.27■□□□□ 0.35
PTPRT-210ENST00000617474 FANCBQ8NB91 859 aa17.27■□□□□ 0.35
PTPRT-210ENST00000617474 FBF1Q8TES7 1133 aa17.27■□□□□ 0.35
PTPRT-210ENST00000617474 USP17L12C9JPN9 530 aa17.26■□□□□ 0.35
PTPRT-210ENST00000617474 USP17L21D6R901 530 aa17.26■□□□□ 0.35
PTPRT-210ENST00000617474 CLCN6P51797 869 aa17.26■□□□□ 0.35
PTPRT-210ENST00000617474 FERMT2Q96AC1 680 aa17.26■□□□□ 0.35
PTPRT-210ENST00000617474 CEP104O60308 925 aa17.26■□□□□ 0.35
PTPRT-210ENST00000617474 IFIH1Q9BYX4 1025 aaKnown RBP17.26■□□□□ 0.35
PTPRT-210ENST00000617474 KCNK9Q9NPC2 374 aa17.26■□□□□ 0.35
PTPRT-210ENST00000617474 KCNJ18B7U540 433 aa17.26■□□□□ 0.35
PTPRT-210ENST00000617474 PARP1P09874 1014 aaKnown RBP17.26■□□□□ 0.35
PTPRT-210ENST00000617474 CCDC172P0C7W6 258 aa17.26■□□□□ 0.35
PTPRT-210ENST00000617474 KCNJ12Q14500 433 aa17.26■□□□□ 0.35
PTPRT-210ENST00000617474 ZMYM1Q5SVZ6 1142 aa17.26■□□□□ 0.35
PTPRT-210ENST00000617474 SLC35F6Q8N357 371 aa17.26■□□□□ 0.35
PTPRT-210ENST00000617474 TMEM87AQ8NBN3 555 aa17.26■□□□□ 0.35
PTPRT-210ENST00000617474 TSGA10Q9BZW7 698 aa17.26■□□□□ 0.35
PTPRT-210ENST00000617474 IRX3P78415 501 aaPredicted RBP17.26■□□□□ 0.35
PTPRT-210ENST00000617474 TCIRG1Q13488 830 aa17.26■□□□□ 0.35
PTPRT-210ENST00000617474 TUBB2AQ13885 445 aa17.26■□□□□ 0.35
PTPRT-210ENST00000617474 LMBR1Q8WVP7 490 aa17.26■□□□□ 0.35
PTPRT-210ENST00000617474 TUBB2BQ9BVA1 445 aa17.26■□□□□ 0.35
PTPRT-210ENST00000617474 POLA2Q14181 598 aa17.25■□□□□ 0.35
PTPRT-210ENST00000617474 DDB1Q16531 1140 aa17.25■□□□□ 0.35
PTPRT-210ENST00000617474 APOA5Q6Q788 366 aa17.25■□□□□ 0.35
PTPRT-210ENST00000617474 HS2ST1Q7LGA3 356 aa17.25■□□□□ 0.35
PTPRT-210ENST00000617474 ANKS4BQ8N8V4 417 aa17.25■□□□□ 0.35
PTPRT-210ENST00000617474 SMARCC2Q8TAQ2 1214 aa17.25■□□□□ 0.35
PTPRT-210ENST00000617474 STX10O60499 249 aa17.25■□□□□ 0.35
PTPRT-210ENST00000617474 ATP1A2P50993 1020 aa17.25■□□□□ 0.35
PTPRT-210ENST00000617474 GUCY2FP51841 1108 aa17.25■□□□□ 0.35
PTPRT-210ENST00000617474 NR5A1Q13285 461 aa17.25■□□□□ 0.35
PTPRT-210ENST00000617474 CLEC17AQ6ZS10 378 aa17.25■□□□□ 0.35
PTPRT-210ENST00000617474 OSBP2Q969R2 916 aa17.25■□□□□ 0.35
PTPRT-210ENST00000617474 SERPINA10Q9UK55 444 aa17.25■□□□□ 0.35
PTPRT-210ENST00000617474 ZMYM6O95789 1325 aa17.25■□□□□ 0.35
PTPRT-210ENST00000617474 USP27XA6NNY8 438 aa17.25■□□□□ 0.35
PTPRT-210ENST00000617474 CYP2E1P05181 493 aaPredicted RBP17.25■□□□□ 0.35
PTPRT-210ENST00000617474 PHKA1P46020 1223 aa17.25■□□□□ 0.35
PTPRT-210ENST00000617474 LRWD1Q9UFC0 647 aa17.25■□□□□ 0.35
PTPRT-210ENST00000617474 TNKSO95271 1327 aa17.25■□□□□ 0.35
PTPRT-210ENST00000617474 VIMP08670 466 aaKnown RBP17.24■□□□□ 0.35
PTPRT-210ENST00000617474 MORC3Q14149 939 aa17.24■□□□□ 0.35
PTPRT-210ENST00000617474 CNNM4Q6P4Q7 775 aa17.24■□□□□ 0.35
PTPRT-210ENST00000617474 GBP6Q6ZN66 633 aa17.24■□□□□ 0.35
PTPRT-210ENST00000617474 NOX5Q96PH1 765 aa17.24■□□□□ 0.35
PTPRT-210ENST00000617474 SAMSN1Q9NSI8 373 aaKnown RBP17.24■□□□□ 0.35
PTPRT-210ENST00000617474 DDX41Q9UJV9 622 aaKnown RBP17.24■□□□□ 0.35
PTPRT-210ENST00000617474 SPDYE3A6NKU9 549 aa17.24■□□□□ 0.35
PTPRT-210ENST00000617474 M0R2C6 588 aa17.24■□□□□ 0.35
PTPRT-210ENST00000617474 PHKG2P15735 406 aa17.24■□□□□ 0.35
PTPRT-210ENST00000617474 ARID4AP29374 1257 aaPredicted RBP17.24■□□□□ 0.35
PTPRT-210ENST00000617474 GYS2P54840 703 aa17.24■□□□□ 0.35
PTPRT-210ENST00000617474 KIF23Q02241 960 aaPredicted RBP17.24■□□□□ 0.35
PTPRT-210ENST00000617474 TOB2Q14106 344 aaPredicted RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms