RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 RPS6KA4O75676 772 aa14.95□□□□□ -0.02
PPP4R3B-206ENST00000616407 FMNL1O95466 1100 aaPredicted RBP14.95□□□□□ -0.02
PPP4R3B-206ENST00000616407 NR5A1Q13285 461 aa14.95□□□□□ -0.02
PPP4R3B-206ENST00000616407 JAKMIP3Q5VZ66 844 aa14.95□□□□□ -0.02
PPP4R3B-206ENST00000616407 C3P01024 1663 aa14.95□□□□□ -0.02
PPP4R3B-206ENST00000616407 ZNF34Q8IZ26 560 aa14.95□□□□□ -0.02
PPP4R3B-206ENST00000616407 SMARCC2Q8TAQ2 1214 aa14.95□□□□□ -0.02
PPP4R3B-206ENST00000616407 TRIM21P19474 475 aaKnown RBP14.95□□□□□ -0.02
PPP4R3B-206ENST00000616407 C11orf57Q6ZUT1 292 aaPredicted RBP14.95□□□□□ -0.02
PPP4R3B-206ENST00000616407 MARCH10Q8NA82 808 aaPredicted RBP14.95□□□□□ -0.02
PPP4R3B-206ENST00000616407 TBC1D22AQ8WUA7 517 aa14.95□□□□□ -0.02
PPP4R3B-206ENST00000616407 FERMT2Q96AC1 680 aa14.95□□□□□ -0.02
PPP4R3B-206ENST00000616407 NEDD4P46934 1319 aa14.95□□□□□ -0.02
PPP4R3B-206ENST00000616407 CCDC40Q4G0X9 1142 aa14.94□□□□□ -0.02
PPP4R3B-206ENST00000616407 TBC1D9BQ66K14 1250 aa14.94□□□□□ -0.02
PPP4R3B-206ENST00000616407 ZSWIM4Q9H7M6 989 aa14.94□□□□□ -0.02
PPP4R3B-206ENST00000616407 NRBP1Q9UHY1 535 aa14.94□□□□□ -0.02
PPP4R3B-206ENST00000616407 ZNF827Q17R98 1081 aa14.94□□□□□ -0.02
PPP4R3B-206ENST00000616407 CCDC181Q5TID7 509 aa14.94□□□□□ -0.02
PPP4R3B-206ENST00000616407 KRT79Q5XKE5 535 aa14.94□□□□□ -0.02
PPP4R3B-206ENST00000616407 TRMT1LQ7Z2T5 733 aaKnown RBP14.94□□□□□ -0.02
PPP4R3B-206ENST00000616407 OGFOD1Q8N543 542 aa14.94□□□□□ -0.02
PPP4R3B-206ENST00000616407 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.94□□□□□ -0.022e-6■■□□□ 12.7
PPP4R3B-206ENST00000616407 DCCP43146 1447 aa14.94□□□□□ -0.02
PPP4R3B-206ENST00000616407 MECOMQ03112 1051 aa14.94□□□□□ -0.02
PPP4R3B-206ENST00000616407 TMCO3Q6UWJ1 677 aa14.94□□□□□ -0.02
PPP4R3B-206ENST00000616407 KRBA2Q6ZNG9 492 aa14.94□□□□□ -0.02
PPP4R3B-206ENST00000616407 FAM114A1Q8IWE2 563 aa14.94□□□□□ -0.02
PPP4R3B-206ENST00000616407 TDRD7Q8NHU6 1098 aaKnown RBP14.94□□□□□ -0.02
PPP4R3B-206ENST00000616407 MON2Q7Z3U7 1717 aa14.94□□□□□ -0.02
PPP4R3B-206ENST00000616407 GOLGA8HP0CJ92 632 aa14.94□□□□□ -0.02
PPP4R3B-206ENST00000616407 ATP2B4P23634 1241 aa14.94□□□□□ -0.02
PPP4R3B-206ENST00000616407 CCT6AP40227 531 aaKnown RBP14.94□□□□□ -0.02
PPP4R3B-206ENST00000616407 SYT10Q6XYQ8 523 aa14.94□□□□□ -0.02
PPP4R3B-206ENST00000616407 CERS3Q8IU89 383 aa14.94□□□□□ -0.02
PPP4R3B-206ENST00000616407 LEMD3Q9Y2U8 911 aa14.94□□□□□ -0.02
PPP4R3B-206ENST00000616407 SCG2P13521 617 aa14.93□□□□□ -0.02
PPP4R3B-206ENST00000616407 BTDP43251 543 aa14.93□□□□□ -0.02
PPP4R3B-206ENST00000616407 DPCR1Q3MIW9 517 aa14.93□□□□□ -0.02
PPP4R3B-206ENST00000616407 PPP4R3BQ5MIZ7 849 aa14.93□□□□□ -0.02
PPP4R3B-206ENST00000616407 RNF26Q9BY78 433 aaPredicted RBP14.93□□□□□ -0.02
PPP4R3B-206ENST00000616407 NARFQ9UHQ1 456 aa14.93□□□□□ -0.02
PPP4R3B-206ENST00000616407 PCDHA5Q9Y5H7 936 aa14.93□□□□□ -0.02
PPP4R3B-206ENST00000616407 XDHP47989 1333 aa14.93□□□□□ -0.02
PPP4R3B-206ENST00000616407 CCNT1O60563 726 aaKnown RBP14.93□□□□□ -0.02
PPP4R3B-206ENST00000616407 RBM6P78332 1123 aaKnown RBP14.93□□□□□ -0.02
PPP4R3B-206ENST00000616407 TDRD12Q587J7 1177 aaKnown RBP14.93□□□□□ -0.02
PPP4R3B-206ENST00000616407 WWC2Q6AWC2 1192 aa14.93□□□□□ -0.02
PPP4R3B-206ENST00000616407 GPKOWQ92917 476 aaPredicted RBP eCLIP14.93□□□□□ -0.022e-6■■□□□ 12.1
PPP4R3B-206ENST00000616407 RUFY1Q96T51 708 aa14.93□□□□□ -0.02
PPP4R3B-206ENST00000616407 KIF20AO95235 890 aa14.93□□□□□ -0.02
PPP4R3B-206ENST00000616407 SERPINB2P05120 415 aa14.93□□□□□ -0.02
PPP4R3B-206ENST00000616407 DIXDC1Q155Q3 683 aa14.93□□□□□ -0.02
PPP4R3B-206ENST00000616407 TTF2Q9UNY4 1162 aaKnown RBP14.93□□□□□ -0.02
PPP4R3B-206ENST00000616407 GSG1L2A8MUP6 293 aa14.92□□□□□ -0.02
PPP4R3B-206ENST00000616407 PCP11498 1178 aaKnown RBP14.92□□□□□ -0.02
PPP4R3B-206ENST00000616407 PRDX5P30044 214 aa14.92□□□□□ -0.02
PPP4R3B-206ENST00000616407 CASP7P55210 303 aa14.92□□□□□ -0.02
PPP4R3B-206ENST00000616407 TCP10Q12799 353 aa14.92□□□□□ -0.02
PPP4R3B-206ENST00000616407 BLZF1Q9H2G9 400 aa14.92□□□□□ -0.02
PPP4R3B-206ENST00000616407 CTNND2Q9UQB3 1225 aa14.92□□□□□ -0.02
PPP4R3B-206ENST00000616407 USP17L8P0C7I0 530 aa14.92□□□□□ -0.02
PPP4R3B-206ENST00000616407 CT47A1Q5JQC4 288 aaPredicted RBP14.92□□□□□ -0.02
PPP4R3B-206ENST00000616407 LRRC27Q9C0I9 530 aa14.92□□□□□ -0.02
PPP4R3B-206ENST00000616407 VPS16Q9H269 839 aa14.92□□□□□ -0.02
PPP4R3B-206ENST00000616407 CGNQ9P2M7 1197 aaKnown RBP14.92□□□□□ -0.02
PPP4R3B-206ENST00000616407 NRXN3Q9Y4C0 1643 aa14.92□□□□□ -0.02
PPP4R3B-206ENST00000616407 PPP6R2O75170 966 aa14.92□□□□□ -0.02
PPP4R3B-206ENST00000616407 ERLIN1O75477 346 aa14.92□□□□□ -0.02
PPP4R3B-206ENST00000616407 TXKP42681 527 aa14.92□□□□□ -0.02
PPP4R3B-206ENST00000616407 GPR101Q96P66 508 aaPredicted RBP14.92□□□□□ -0.02
PPP4R3B-206ENST00000616407 FOXP1Q9H334 677 aaPredicted RBP14.92□□□□□ -0.02
PPP4R3B-206ENST00000616407 QTRT2Q9H974 415 aaKnown RBP14.92□□□□□ -0.02
PPP4R3B-206ENST00000616407 DDAH1O94760 285 aa14.92□□□□□ -0.02
PPP4R3B-206ENST00000616407 TRIM37O94972 964 aa14.92□□□□□ -0.02
PPP4R3B-206ENST00000616407 APBA3O96018 575 aa14.92□□□□□ -0.02
PPP4R3B-206ENST00000616407 MMP1P03956 469 aa14.92□□□□□ -0.02
PPP4R3B-206ENST00000616407 UBXN1Q04323 297 aa14.92□□□□□ -0.02
PPP4R3B-206ENST00000616407 BLIDQ8IZY5 108 aa14.92□□□□□ -0.02
PPP4R3B-206ENST00000616407 TXLNBQ8N3L3 684 aa14.92□□□□□ -0.02
PPP4R3B-206ENST00000616407 BAG1Q99933 345 aaPredicted RBP14.92□□□□□ -0.02
PPP4R3B-206ENST00000616407 VEZTQ9HBM0 779 aa14.92□□□□□ -0.02
PPP4R3B-206ENST00000616407 PYCARDQ9ULZ3 195 aa14.92□□□□□ -0.02
PPP4R3B-206ENST00000616407 CDC27P30260 824 aa14.91□□□□□ -0.02
PPP4R3B-206ENST00000616407 TNNT3P45378 269 aaPredicted RBP14.91□□□□□ -0.02
PPP4R3B-206ENST00000616407 PLCD1P51178 756 aa14.91□□□□□ -0.02
PPP4R3B-206ENST00000616407 ITPK1Q13572 414 aa14.91□□□□□ -0.02
PPP4R3B-206ENST00000616407 KARSQ15046 597 aaKnown RBP14.91□□□□□ -0.02
PPP4R3B-206ENST00000616407 NONOQ15233 471 aaKnown RBP eCLIP14.91□□□□□ -0.02
PPP4R3B-206ENST00000616407 DOK7Q18PE1 504 aa14.91□□□□□ -0.02
PPP4R3B-206ENST00000616407 KCNB2Q92953 911 aa14.91□□□□□ -0.02
PPP4R3B-206ENST00000616407 TRPC5Q9UL62 973 aaPredicted RBP14.91□□□□□ -0.02
PPP4R3B-206ENST00000616407 ABCC12Q96J65 1359 aa14.91□□□□□ -0.02
PPP4R3B-206ENST00000616407 KLRF2D3W0D1 207 aa14.91□□□□□ -0.02
PPP4R3B-206ENST00000616407 CAMTA2O94983 1202 aa14.91□□□□□ -0.02
PPP4R3B-206ENST00000616407 MRPL12P52815 198 aaKnown RBP14.91□□□□□ -0.02
PPP4R3B-206ENST00000616407 PTGDRQ13258 359 aa14.91□□□□□ -0.02
PPP4R3B-206ENST00000616407 TCERG1LQ5VWI1 586 aa14.91□□□□□ -0.02
PPP4R3B-206ENST00000616407 USP40Q9NVE5 1235 aa14.91□□□□□ -0.02
PPP4R3B-206ENST00000616407 SPDYE4A6NLX3 237 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms