RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 APBA2Q99767 749 aa21.7■■□□□ 1.06
TRAPPC3-209ENST00000616395 PORCNQ9H237 461 aa21.7■■□□□ 1.06
TRAPPC3-209ENST00000616395 AS3MTQ9HBK9 375 aa21.7■■□□□ 1.06
TRAPPC3-209ENST00000616395 GPR75-ASB3A0A0A6YYF3 556 aa21.69■■□□□ 1.06
TRAPPC3-209ENST00000616395 NPM3O75607 178 aaKnown RBP21.69■■□□□ 1.06
TRAPPC3-209ENST00000616395 ADORA1P30542 326 aa21.69■■□□□ 1.06
TRAPPC3-209ENST00000616395 RRP1P56182 461 aaKnown RBP21.69■■□□□ 1.06
TRAPPC3-209ENST00000616395 RASGRF1Q13972 1273 aa21.69■■□□□ 1.06
TRAPPC3-209ENST00000616395 CCDC102BQ68D86 513 aa21.69■■□□□ 1.06
TRAPPC3-209ENST00000616395 CCAR1Q8IX12 1150 aaKnown RBP21.69■■□□□ 1.06
TRAPPC3-209ENST00000616395 TMOD4Q9NZQ9 345 aa21.69■■□□□ 1.06
TRAPPC3-209ENST00000616395 ATAD5Q96QE3 1844 aa21.68■■□□□ 1.06
TRAPPC3-209ENST00000616395 FOSL2P15408 326 aa21.68■■□□□ 1.06
TRAPPC3-209ENST00000616395 RTP1P59025 263 aa21.68■■□□□ 1.06
TRAPPC3-209ENST00000616395 WDR18Q9BV38 432 aa21.68■■□□□ 1.06
TRAPPC3-209ENST00000616395 SMC4Q9NTJ3 1288 aa21.68■■□□□ 1.06
TRAPPC3-209ENST00000616395 LTBP2Q14767 1821 aa21.67■■□□□ 1.06
TRAPPC3-209ENST00000616395 ZBTB22O15209 634 aa21.67■■□□□ 1.06
TRAPPC3-209ENST00000616395 CIAO1O76071 339 aa21.67■■□□□ 1.06
TRAPPC3-209ENST00000616395 BACE1P56817 501 aa21.67■■□□□ 1.06
TRAPPC3-209ENST00000616395 ERVK-9P63128 1117 aa21.67■■□□□ 1.06
TRAPPC3-209ENST00000616395 ERVK-24P63145 666 aa21.67■■□□□ 1.06
TRAPPC3-209ENST00000616395 MECOMQ03112 1051 aa21.67■■□□□ 1.06
TRAPPC3-209ENST00000616395 SPTY2D1Q68D10 685 aaPredicted RBP21.67■■□□□ 1.06
TRAPPC3-209ENST00000616395 PLEKHH3Q7Z736 793 aa21.67■■□□□ 1.06
TRAPPC3-209ENST00000616395 ZNF384Q8TF68 577 aa21.67■■□□□ 1.06
TRAPPC3-209ENST00000616395 CDH23Q9H251 3354 aa21.67■■□□□ 1.06
TRAPPC3-209ENST00000616395 POTEEQ6S8J3 1075 aa21.66■■□□□ 1.06
TRAPPC3-209ENST00000616395 PAGR1Q9BTK6 254 aa21.66■■□□□ 1.06
TRAPPC3-209ENST00000616395 DDX20Q9UHI6 824 aaKnown RBP21.66■■□□□ 1.06
TRAPPC3-209ENST00000616395 RAPGEFL1Q9UHV5 662 aa21.66■■□□□ 1.06
TRAPPC3-209ENST00000616395 FRMPD3Q5JV73 1810 aa21.66■■□□□ 1.06
TRAPPC3-209ENST00000616395 JAG1P78504 1218 aa21.65■■□□□ 1.06
TRAPPC3-209ENST00000616395 SMAD3P84022 425 aaKnown RBP21.65■■□□□ 1.06
TRAPPC3-209ENST00000616395 MAP2K5Q13163 448 aa21.65■■□□□ 1.06
TRAPPC3-209ENST00000616395 FLRT1Q9NZU1 646 aa21.65■■□□□ 1.06
TRAPPC3-209ENST00000616395 FBXO3Q9UK99 471 aa21.65■■□□□ 1.06
TRAPPC3-209ENST00000616395 ATP11BQ9Y2G3 1177 aa21.65■■□□□ 1.06
TRAPPC3-209ENST00000616395 PDS5AQ29RF7 1337 aaKnown RBP21.65■■□□□ 1.06
TRAPPC3-209ENST00000616395 DNM1LO00429 736 aa21.64■■□□□ 1.05
TRAPPC3-209ENST00000616395 MFSD14CQ5VZR4 134 aa21.64■■□□□ 1.05
TRAPPC3-209ENST00000616395 ERICH6Q7L0X2 663 aa21.64■■□□□ 1.05
TRAPPC3-209ENST00000616395 LPAR1Q92633 364 aa21.64■■□□□ 1.05
TRAPPC3-209ENST00000616395 EDC3Q96F86 508 aaKnown RBP21.64■■□□□ 1.05
TRAPPC3-209ENST00000616395 HERC5Q9UII4 1024 aaKnown RBP21.64■■□□□ 1.05
TRAPPC3-209ENST00000616395 MUC3AQ02505 3323 aa21.64■■□□□ 1.05
TRAPPC3-209ENST00000616395 TTC28Q96AY4 2481 aa21.63■■□□□ 1.05
TRAPPC3-209ENST00000616395 CNGA1P29973 690 aa21.63■■□□□ 1.05
TRAPPC3-209ENST00000616395 ALDH1L2Q3SY69 923 aa21.63■■□□□ 1.05
TRAPPC3-209ENST00000616395 BADQ92934 168 aa21.63■■□□□ 1.05
TRAPPC3-209ENST00000616395 CWC22Q9HCG8 908 aaKnown RBP21.63■■□□□ 1.05
TRAPPC3-209ENST00000616395 PRDM5Q9NQX1 630 aaPredicted RBP21.63■■□□□ 1.05
TRAPPC3-209ENST00000616395 NDUFB9Q9Y6M9 179 aa21.63■■□□□ 1.05
TRAPPC3-209ENST00000616395 C19orf81C9J6K1 198 aa21.62■■□□□ 1.05
TRAPPC3-209ENST00000616395 TNFRSF10AO00220 468 aa21.62■■□□□ 1.05
TRAPPC3-209ENST00000616395 TJAP1Q5JTD0 557 aa21.62■■□□□ 1.05
TRAPPC3-209ENST00000616395 PPP4R2Q9NY27 417 aa21.62■■□□□ 1.05
TRAPPC3-209ENST00000616395 MSCO60682 206 aa21.61■■□□□ 1.05
TRAPPC3-209ENST00000616395 MAP4K4O95819 1239 aaPredicted RBP21.61■■□□□ 1.05
TRAPPC3-209ENST00000616395 ASNSP08243 561 aa21.61■■□□□ 1.05
TRAPPC3-209ENST00000616395 IL15P40933 162 aaPredicted RBP21.61■■□□□ 1.05
TRAPPC3-209ENST00000616395 TIMM10P62072 90 aa21.61■■□□□ 1.05
TRAPPC3-209ENST00000616395 SHROOM1Q2M3G4 852 aaPredicted RBP21.61■■□□□ 1.05
TRAPPC3-209ENST00000616395 GTF3C2Q8WUA4 911 aaPredicted RBP21.61■■□□□ 1.05
TRAPPC3-209ENST00000616395 PTPRCP08575 1304 aa21.61■■□□□ 1.05
TRAPPC3-209ENST00000616395 USP17L10C9JJH3 530 aa21.6■■□□□ 1.05
TRAPPC3-209ENST00000616395 MS4A1P11836 297 aa21.6■■□□□ 1.05
TRAPPC3-209ENST00000616395 GJC2Q5T442 439 aaPredicted RBP21.6■■□□□ 1.05
TRAPPC3-209ENST00000616395 SLC39A5Q6ZMH5 540 aa21.6■■□□□ 1.05
TRAPPC3-209ENST00000616395 USP38Q8NB14 1042 aa21.6■■□□□ 1.05
TRAPPC3-209ENST00000616395 PI4KBQ9UBF8 816 aa21.6■■□□□ 1.05
TRAPPC3-209ENST00000616395 PA2G4Q9UQ80 394 aaKnown RBP21.6■■□□□ 1.05
TRAPPC3-209ENST00000616395 LDHCP07864 332 aa21.59■■□□□ 1.05
TRAPPC3-209ENST00000616395 GSTO1P78417 241 aa21.59■■□□□ 1.05
TRAPPC3-209ENST00000616395 TEX11Q8IYF3 940 aa21.59■■□□□ 1.05
TRAPPC3-209ENST00000616395 TRPV1Q8NER1 839 aa21.59■■□□□ 1.05
TRAPPC3-209ENST00000616395 GLRX3O76003 335 aaKnown RBP21.58■■□□□ 1.05
TRAPPC3-209ENST00000616395 CYP2C19P33261 490 aa21.58■■□□□ 1.05
TRAPPC3-209ENST00000616395 RARSP54136 660 aaKnown RBP21.58■■□□□ 1.05
TRAPPC3-209ENST00000616395 IRX6P78412 446 aaPredicted RBP21.58■■□□□ 1.05
TRAPPC3-209ENST00000616395 ATP2B2Q01814 1243 aa21.58■■□□□ 1.05
TRAPPC3-209ENST00000616395 TRIM60Q495X7 471 aa21.58■■□□□ 1.05
TRAPPC3-209ENST00000616395 WDR78Q5VTH9 848 aa21.58■■□□□ 1.05
TRAPPC3-209ENST00000616395 NSUN4Q96CB9 384 aaKnown RBP21.58■■□□□ 1.05
TRAPPC3-209ENST00000616395 DNAJC18Q9H819 358 aa21.58■■□□□ 1.05
TRAPPC3-209ENST00000616395 EMILIN3Q9NT22 766 aa21.58■■□□□ 1.05
TRAPPC3-209ENST00000616395 NOB1Q9ULX3 412 aaKnown RBP21.58■■□□□ 1.05
TRAPPC3-209ENST00000616395 SLC15A5A6NIM6 579 aa21.57■■□□□ 1.04
TRAPPC3-209ENST00000616395 CNMDO75829 334 aa21.57■■□□□ 1.04
TRAPPC3-209ENST00000616395 GDF11O95390 407 aa21.57■■□□□ 1.04
TRAPPC3-209ENST00000616395 TBC1D9Q6ZT07 1266 aa21.57■■□□□ 1.04
TRAPPC3-209ENST00000616395 SH3RF1Q7Z6J0 888 aa21.57■■□□□ 1.04
TRAPPC3-209ENST00000616395 NPLOC4Q8TAT6 608 aa21.57■■□□□ 1.04
TRAPPC3-209ENST00000616395 SH3RF3Q8TEJ3 882 aaPredicted RBP21.57■■□□□ 1.04
TRAPPC3-209ENST00000616395 PDLIM7Q9NR12 457 aa21.57■■□□□ 1.04
TRAPPC3-209ENST00000616395 RABGAP1Q9Y3P9 1069 aa21.57■■□□□ 1.04
TRAPPC3-209ENST00000616395 TMEM265A0A087WTH1 108 aa21.56■■□□□ 1.04
TRAPPC3-209ENST00000616395 TRIM43BA6NCK2 446 aa21.56■■□□□ 1.04
TRAPPC3-209ENST00000616395 PTPREP23469 700 aa21.56■■□□□ 1.04
TRAPPC3-209ENST00000616395 PI16Q6UXB8 463 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms