RNA–Protein interactions for RNA: ENST00000616114.4

PCDH15-229, Transcript of protocadherin related 15, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH15, Length 5,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-229ENST00000616114 PUF60Q9UHX1 559 aaKnown RBP9.98□□□□□ -0.81
PCDH15-229ENST00000616114 ZHX1Q9UKY1 873 aaPredicted RBP9.98□□□□□ -0.81
PCDH15-229ENST00000616114 WWC3Q9ULE0 1092 aa9.98□□□□□ -0.81
PCDH15-229ENST00000616114 SPDYE3A6NKU9 549 aa9.98□□□□□ -0.81
PCDH15-229ENST00000616114 CCT6AP40227 531 aaKnown RBP9.98□□□□□ -0.81
PCDH15-229ENST00000616114 CHAMP1Q96JM3 812 aa9.98□□□□□ -0.81
PCDH15-229ENST00000616114 ZC3H12CQ9C0D7 883 aaKnown RBP9.98□□□□□ -0.81
PCDH15-229ENST00000616114 SEMA3EO15041 775 aa9.98□□□□□ -0.81
PCDH15-229ENST00000616114 LETM2Q2VYF4 491 aa9.98□□□□□ -0.81
PCDH15-229ENST00000616114 DYDC1Q8WWB3 177 aa9.98□□□□□ -0.81
PCDH15-229ENST00000616114 TMEM94Q12767 1356 aa9.98□□□□□ -0.81
PCDH15-229ENST00000616114 IL6STP40189 918 aaPredicted RBP9.98□□□□□ -0.81
PCDH15-229ENST00000616114 TRAPPC3LQ5T215 181 aa9.98□□□□□ -0.81
PCDH15-229ENST00000616114 NBPF11Q86T75 865 aa9.98□□□□□ -0.81
PCDH15-229ENST00000616114 CARD6Q9BX69 1037 aa9.98□□□□□ -0.81
PCDH15-229ENST00000616114 VPS16Q9H269 839 aa9.98□□□□□ -0.81
PCDH15-229ENST00000616114 RASAL2Q9UJF2 1139 aa9.98□□□□□ -0.81
PCDH15-229ENST00000616114 NSFL1CQ9UNZ2 370 aaKnown RBP9.98□□□□□ -0.81
PCDH15-229ENST00000616114 LARGE1O95461 756 aa9.97□□□□□ -0.81
PCDH15-229ENST00000616114 ADD2P35612 726 aa9.97□□□□□ -0.81
PCDH15-229ENST00000616114 NT5C2P49902 561 aa9.97□□□□□ -0.81
PCDH15-229ENST00000616114 CSGALNACT2Q8N6G5 542 aa9.97□□□□□ -0.81
PCDH15-229ENST00000616114 KIAA1524Q8TCG1 905 aa9.97□□□□□ -0.81
PCDH15-229ENST00000616114 BBXQ8WY36 941 aaPredicted RBP9.97□□□□□ -0.81
PCDH15-229ENST00000616114 CLIC4Q9Y696 253 aa9.97□□□□□ -0.81
PCDH15-229ENST00000616114 WDR19Q8NEZ3 1342 aa9.97□□□□□ -0.81
PCDH15-229ENST00000616114 M0R2C6 588 aa9.97□□□□□ -0.81
PCDH15-229ENST00000616114 FMNL1O95466 1100 aaPredicted RBP9.97□□□□□ -0.81
PCDH15-229ENST00000616114 ADD1P35611 737 aaKnown RBP9.97□□□□□ -0.81
PCDH15-229ENST00000616114 SSR1P43307 286 aaKnown RBP9.97□□□□□ -0.81
PCDH15-229ENST00000616114 PICALMQ13492 652 aa9.97□□□□□ -0.81
PCDH15-229ENST00000616114 ELF2Q15723 593 aa9.97□□□□□ -0.81
PCDH15-229ENST00000616114 SPECC1Q5M775 1068 aa9.97□□□□□ -0.81
PCDH15-229ENST00000616114 VAV2P52735 878 aa9.97□□□□□ -0.81
PCDH15-229ENST00000616114 KIAA0753Q2KHM9 967 aa9.97□□□□□ -0.81
PCDH15-229ENST00000616114 TSGA10IPQ3SY00 556 aa9.97□□□□□ -0.81
PCDH15-229ENST00000616114 LINC00301Q8NCQ3 95 aa9.97□□□□□ -0.81
PCDH15-229ENST00000616114 PDLIM2Q96JY6 352 aa9.97□□□□□ -0.81
PCDH15-229ENST00000616114 RPGRIP1Q96KN7 1286 aa9.97□□□□□ -0.81
PCDH15-229ENST00000616114 GOPCQ9HD26 462 aa9.97□□□□□ -0.81
PCDH15-229ENST00000616114 RPAP1Q9BWH6 1393 aaPredicted RBP9.97□□□□□ -0.81
PCDH15-229ENST00000616114 TNNC1P63316 161 aa9.97□□□□□ -0.81
PCDH15-229ENST00000616114 GPR161Q8N6U8 529 aaKnown RBP9.97□□□□□ -0.81
PCDH15-229ENST00000616114 NELFBQ8WX92 580 aa9.97□□□□□ -0.81
PCDH15-229ENST00000616114 PRAMEF22A3QJZ6 481 aa9.97□□□□□ -0.81
PCDH15-229ENST00000616114 A6NNZ2 444 aa9.97□□□□□ -0.81
PCDH15-229ENST00000616114 ERVV-1B6SEH8 477 aa9.97□□□□□ -0.81
PCDH15-229ENST00000616114 MAP2K1Q02750 393 aaPredicted RBP9.97□□□□□ -0.81
PCDH15-229ENST00000616114 SMC1AQ14683 1233 aaKnown RBP9.97□□□□□ -0.81
PCDH15-229ENST00000616114 TUBB8Q3ZCM7 444 aa9.97□□□□□ -0.81
PCDH15-229ENST00000616114 CNBD1Q8NA66 436 aa9.97□□□□□ -0.81
PCDH15-229ENST00000616114 HDAC9Q9UKV0 1011 aa9.97□□□□□ -0.81
PCDH15-229ENST00000616114 ERCC5P28715 1186 aaPredicted RBP9.96□□□□□ -0.81
PCDH15-229ENST00000616114 TRAPPC10P48553 1259 aa9.96□□□□□ -0.81
PCDH15-229ENST00000616114 ETF1P62495 437 aaKnown RBP9.96□□□□□ -0.81
PCDH15-229ENST00000616114 UBE4AQ14139 1066 aa9.96□□□□□ -0.81
PCDH15-229ENST00000616114 APOA5Q6Q788 366 aa9.96□□□□□ -0.81
PCDH15-229ENST00000616114 HS2ST1Q7LGA3 356 aa9.96□□□□□ -0.81
PCDH15-229ENST00000616114 RNF26Q9BY78 433 aaPredicted RBP9.96□□□□□ -0.81
PCDH15-229ENST00000616114 PUS3Q9BZE2 481 aaKnown RBP9.96□□□□□ -0.81
PCDH15-229ENST00000616114 NUCKS1Q9H1E3 243 aaKnown RBP9.96□□□□□ -0.81
PCDH15-229ENST00000616114 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.96□□□□□ -0.812e-6■■■■■ 96.1
PCDH15-229ENST00000616114 CLTCQ00610 1675 aaKnown RBP9.96□□□□□ -0.81
PCDH15-229ENST00000616114 PPLO60437 1756 aa9.96□□□□□ -0.81
PCDH15-229ENST00000616114 GNPATO15228 680 aa9.96□□□□□ -0.81
PCDH15-229ENST00000616114 KIF23Q02241 960 aaPredicted RBP9.96□□□□□ -0.81
PCDH15-229ENST00000616114 AATFQ9NY61 560 aaKnown RBP eCLIP9.96□□□□□ -0.81
PCDH15-229ENST00000616114 VPS54Q9P1Q0 977 aa9.96□□□□□ -0.81
PCDH15-229ENST00000616114 HSPA2P54652 639 aa9.96□□□□□ -0.82
PCDH15-229ENST00000616114 SPATA1Q5VX52 437 aa9.96□□□□□ -0.82
PCDH15-229ENST00000616114 HAUS3Q68CZ6 603 aa9.96□□□□□ -0.82
PCDH15-229ENST00000616114 CCDC174Q6PII3 467 aa9.96□□□□□ -0.82
PCDH15-229ENST00000616114 CCDC84Q86UT8 332 aaPredicted RBP9.96□□□□□ -0.82
PCDH15-229ENST00000616114 TBC1D22AQ8WUA7 517 aa9.96□□□□□ -0.82
PCDH15-229ENST00000616114 JAKMIP2Q96AA8 810 aa9.96□□□□□ -0.82
PCDH15-229ENST00000616114 BCCIPQ9P287 314 aaKnown RBP eCLIP9.96□□□□□ -0.82
PCDH15-229ENST00000616114 PYCARDQ9ULZ3 195 aa9.96□□□□□ -0.82
PCDH15-229ENST00000616114 ABCC12Q96J65 1359 aa9.96□□□□□ -0.82
PCDH15-229ENST00000616114 GTPBP6O43824 516 aaPredicted RBP9.96□□□□□ -0.82
PCDH15-229ENST00000616114 FAM13AO94988 1023 aa9.96□□□□□ -0.82
PCDH15-229ENST00000616114 RHOXF2BP0C7M4 288 aa9.96□□□□□ -0.82
PCDH15-229ENST00000616114 ADORA1P30542 326 aa9.96□□□□□ -0.82
PCDH15-229ENST00000616114 KRT9P35527 623 aa9.96□□□□□ -0.82
PCDH15-229ENST00000616114 SARM1Q6SZW1 724 aa9.96□□□□□ -0.82
PCDH15-229ENST00000616114 ARFGAP2Q8N6H7 521 aa9.96□□□□□ -0.82
PCDH15-229ENST00000616114 CCDC155Q8N6L0 562 aa9.96□□□□□ -0.82
PCDH15-229ENST00000616114 DDX17Q92841 729 aaKnown RBP9.96□□□□□ -0.82
PCDH15-229ENST00000616114 RHOXF2Q9BQY4 288 aa9.96□□□□□ -0.82
PCDH15-229ENST00000616114 STMN4Q9H169 189 aaPredicted RBP9.96□□□□□ -0.82
PCDH15-229ENST00000616114 GREM2Q9H772 168 aa9.96□□□□□ -0.82
PCDH15-229ENST00000616114 MAGEF1Q9HAY2 307 aa9.96□□□□□ -0.82
PCDH15-229ENST00000616114 STX10O60499 249 aa9.95□□□□□ -0.82
PCDH15-229ENST00000616114 CCNT1O60563 726 aaKnown RBP9.95□□□□□ -0.82
PCDH15-229ENST00000616114 PRDM1O75626 825 aa9.95□□□□□ -0.82
PCDH15-229ENST00000616114 IGKV5-2P06315 115 aa9.95□□□□□ -0.82
PCDH15-229ENST00000616114 CAPN2P17655 700 aa9.95□□□□□ -0.82
PCDH15-229ENST00000616114 ARID4AP29374 1257 aaPredicted RBP9.95□□□□□ -0.82
PCDH15-229ENST00000616114 LRMPQ12912 555 aa9.95□□□□□ -0.82
PCDH15-229ENST00000616114 PRPF4BQ13523 1007 aaKnown RBP9.95□□□□□ -0.82
PCDH15-229ENST00000616114 BRD3Q15059 726 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms