RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 EXOC6BQ9Y2D4 811 aa25.38■■□□□ 1.65
TRAPPC3-208ENST00000616074 SGPL1O95470 568 aa25.37■■□□□ 1.65
TRAPPC3-208ENST00000616074 PANK1Q8TE04 598 aa25.37■■□□□ 1.65
TRAPPC3-208ENST00000616074 DPF3Q92784 378 aa25.37■■□□□ 1.65
TRAPPC3-208ENST00000616074 PLXNB2O15031 1838 aa25.37■■□□□ 1.65
TRAPPC3-208ENST00000616074 ZBED9Q6R2W3 1325 aa25.37■■□□□ 1.65
TRAPPC3-208ENST00000616074 HLA-DOAP06340 250 aa25.36■■□□□ 1.65
TRAPPC3-208ENST00000616074 MIGA1Q8NAN2 632 aa25.36■■□□□ 1.65
TRAPPC3-208ENST00000616074 ANTXR1Q9H6X2 564 aa25.36■■□□□ 1.65
TRAPPC3-208ENST00000616074 ZBTB21Q9ULJ3 1066 aa25.36■■□□□ 1.65
TRAPPC3-208ENST00000616074 FARP2O94887 1054 aaPredicted RBP25.35■■□□□ 1.65
TRAPPC3-208ENST00000616074 FXR1P51114 621 aaKnown RBP eCLIP25.35■■□□□ 1.65
TRAPPC3-208ENST00000616074 DIEXFQ68CQ4 756 aaKnown RBP25.35■■□□□ 1.65
TRAPPC3-208ENST00000616074 MAGEB6Q8N7X4 407 aa25.35■■□□□ 1.65
TRAPPC3-208ENST00000616074 TMOD4Q9NZQ9 345 aa25.35■■□□□ 1.65
TRAPPC3-208ENST00000616074 IRX3P78415 501 aaPredicted RBP25.34■■□□□ 1.65
TRAPPC3-208ENST00000616074 AACSQ86V21 672 aa25.34■■□□□ 1.65
TRAPPC3-208ENST00000616074 DEFB118Q96PH6 123 aa25.34■■□□□ 1.65
TRAPPC3-208ENST00000616074 HTATIP2Q9BUP3 242 aa25.34■■□□□ 1.65
TRAPPC3-208ENST00000616074 PAK6Q9NQU5 681 aaPredicted RBP25.34■■□□□ 1.65
TRAPPC3-208ENST00000616074 GINM1Q9NU53 330 aa25.34■■□□□ 1.65
TRAPPC3-208ENST00000616074 MORF4L1Q9UBU8 362 aa25.34■■□□□ 1.65
TRAPPC3-208ENST00000616074 USP17L10C9JJH3 530 aa25.33■■□□□ 1.65
TRAPPC3-208ENST00000616074 HOXA7P31268 230 aaPredicted RBP25.33■■□□□ 1.65
TRAPPC3-208ENST00000616074 ERC1Q8IUD2 1116 aa25.33■■□□□ 1.65
TRAPPC3-208ENST00000616074 DDX60LQ5H9U9 1706 aaKnown RBP25.32■■□□□ 1.64
TRAPPC3-208ENST00000616074 RANBP2P49792 3224 aaKnown RBP25.32■■□□□ 1.64
TRAPPC3-208ENST00000616074 C19orf81C9J6K1 198 aa25.32■■□□□ 1.64
TRAPPC3-208ENST00000616074 USP5P45974 858 aa25.32■■□□□ 1.64
TRAPPC3-208ENST00000616074 P2RX7Q99572 595 aaKnown RBP25.32■■□□□ 1.64
TRAPPC3-208ENST00000616074 GJD2Q9UKL4 321 aa25.32■■□□□ 1.64
TRAPPC3-208ENST00000616074 TRIOBPQ9H2D6 2365 aa25.31■■□□□ 1.64
TRAPPC3-208ENST00000616074 PEX10O60683 326 aa25.31■■□□□ 1.64
TRAPPC3-208ENST00000616074 MAP3K12Q12852 859 aa25.31■■□□□ 1.64
TRAPPC3-208ENST00000616074 CHRDL2Q6WN34 429 aa25.31■■□□□ 1.64
TRAPPC3-208ENST00000616074 CERS3Q8IU89 383 aa25.31■■□□□ 1.64
TRAPPC3-208ENST00000616074 IL1RAPL2Q9NP60 686 aa25.31■■□□□ 1.64
TRAPPC3-208ENST00000616074 NAV1Q8NEY1 1877 aa25.3■■□□□ 1.64
TRAPPC3-208ENST00000616074 TFRCP02786 760 aaKnown RBP25.3■■□□□ 1.64
TRAPPC3-208ENST00000616074 HERVK_113P62684 666 aa25.3■■□□□ 1.64
TRAPPC3-208ENST00000616074 TXNRD2Q9NNW7 524 aa25.3■■□□□ 1.64
TRAPPC3-208ENST00000616074 GH2P01242 217 aa25.29■■□□□ 1.64
TRAPPC3-208ENST00000616074 HMGCRP04035 888 aa25.29■■□□□ 1.64
TRAPPC3-208ENST00000616074 TATDN1Q6P1N9 297 aa25.29■■□□□ 1.64
TRAPPC3-208ENST00000616074 RHPN1Q8TCX5 695 aa25.29■■□□□ 1.64
TRAPPC3-208ENST00000616074 CRISPLD2Q9H0B8 497 aa25.29■■□□□ 1.64
TRAPPC3-208ENST00000616074 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.29■■□□□ 1.64
TRAPPC3-208ENST00000616074 EMILIN3Q9NT22 766 aa25.29■■□□□ 1.64
TRAPPC3-208ENST00000616074 ALPK3Q96L96 1907 aa25.28■■□□□ 1.64
TRAPPC3-208ENST00000616074 SZT2Q5T011 3432 aa25.28■■□□□ 1.64
TRAPPC3-208ENST00000616074 TRIM32Q13049 653 aa25.28■■□□□ 1.64
TRAPPC3-208ENST00000616074 HSP90AB4PQ58FF6 505 aa25.28■■□□□ 1.64
TRAPPC3-208ENST00000616074 EHD4Q9H223 541 aa25.28■■□□□ 1.64
TRAPPC3-208ENST00000616074 SERPINB13Q9UIV8 391 aa25.28■■□□□ 1.64
TRAPPC3-208ENST00000616074 CAPN2P17655 700 aa25.27■■□□□ 1.64
TRAPPC3-208ENST00000616074 TMED8Q6PL24 325 aaPredicted RBP25.27■■□□□ 1.64
TRAPPC3-208ENST00000616074 USP17L2Q6R6M4 530 aa25.27■■□□□ 1.64
TRAPPC3-208ENST00000616074 GPRC5AQ8NFJ5 357 aa25.27■■□□□ 1.64
TRAPPC3-208ENST00000616074 RIOK1Q9BRS2 568 aaKnown RBP25.27■■□□□ 1.64
TRAPPC3-208ENST00000616074 RBPJLQ9UBG7 517 aa25.27■■□□□ 1.64
TRAPPC3-208ENST00000616074 TRIB2Q92519 343 aa25.26■■□□□ 1.63
TRAPPC3-208ENST00000616074 CYP2B6P20813 491 aa25.25■■□□□ 1.63
TRAPPC3-208ENST00000616074 ZYXQ15942 572 aaKnown RBP25.25■■□□□ 1.63
TRAPPC3-208ENST00000616074 Q3C1V9 767 aa25.25■■□□□ 1.63
TRAPPC3-208ENST00000616074 POTEEQ6S8J3 1075 aa25.25■■□□□ 1.63
TRAPPC3-208ENST00000616074 TTC6Q86TZ1 520 aa25.25■■□□□ 1.63
TRAPPC3-208ENST00000616074 RBM27Q9P2N5 1060 aaKnown RBP25.25■■□□□ 1.63
TRAPPC3-208ENST00000616074 NR2E3Q9Y5X4 410 aa25.25■■□□□ 1.63
TRAPPC3-208ENST00000616074 RPTORQ8N122 1335 aa25.24■■□□□ 1.63
TRAPPC3-208ENST00000616074 APBB1O00213 710 aa25.24■■□□□ 1.63
TRAPPC3-208ENST00000616074 MS4A1P11836 297 aa25.24■■□□□ 1.63
TRAPPC3-208ENST00000616074 ERVK-9P63128 1117 aa25.24■■□□□ 1.63
TRAPPC3-208ENST00000616074 ERVK-24P63145 666 aa25.24■■□□□ 1.63
TRAPPC3-208ENST00000616074 TTF1Q15361 905 aaPredicted RBP25.24■■□□□ 1.63
TRAPPC3-208ENST00000616074 DIS3LQ8TF46 1054 aaKnown RBP25.24■■□□□ 1.63
TRAPPC3-208ENST00000616074 PAWRQ96IZ0 340 aaKnown RBP25.24■■□□□ 1.63
TRAPPC3-208ENST00000616074 C12orf42Q96LP6 360 aa25.24■■□□□ 1.63
TRAPPC3-208ENST00000616074 FEZ1Q99689 392 aa25.24■■□□□ 1.63
TRAPPC3-208ENST00000616074 PAGR1Q9BTK6 254 aa25.24■■□□□ 1.63
TRAPPC3-208ENST00000616074 MAGEB6P1A0A0J9YX57 407 aa25.23■■□□□ 1.63
TRAPPC3-208ENST00000616074 PLCD1P51178 756 aa25.23■■□□□ 1.63
TRAPPC3-208ENST00000616074 RAB3GAP1Q15042 981 aa25.23■■□□□ 1.63
TRAPPC3-208ENST00000616074 CERKLQ49MI3 558 aaPredicted RBP25.23■■□□□ 1.63
TRAPPC3-208ENST00000616074 CLASRPQ8N2M8 674 aaKnown RBP25.23■■□□□ 1.63
TRAPPC3-208ENST00000616074 GTF3C2Q8WUA4 911 aaPredicted RBP25.23■■□□□ 1.63
TRAPPC3-208ENST00000616074 KIF1BPQ96EK5 621 aa25.23■■□□□ 1.63
TRAPPC3-208ENST00000616074 NUDT12Q9BQG2 462 aa25.23■■□□□ 1.63
TRAPPC3-208ENST00000616074 PORCNQ9H237 461 aa25.23■■□□□ 1.63
TRAPPC3-208ENST00000616074 HMX1Q9NP08 348 aaPredicted RBP25.23■■□□□ 1.63
TRAPPC3-208ENST00000616074 PDE6AP16499 860 aa25.22■■□□□ 1.63
TRAPPC3-208ENST00000616074 MAPK4P31152 587 aa25.22■■□□□ 1.63
TRAPPC3-208ENST00000616074 SHMT1P34896 483 aa25.22■■□□□ 1.63
TRAPPC3-208ENST00000616074 ABCB5Q2M3G0 1257 aa25.22■■□□□ 1.63
TRAPPC3-208ENST00000616074 SLC9C2Q5TAH2 1124 aa25.22■■□□□ 1.63
TRAPPC3-208ENST00000616074 SIRT2Q8IXJ6 389 aa25.22■■□□□ 1.63
TRAPPC3-208ENST00000616074 RPAP2Q8IXW5 612 aaPredicted RBP25.22■■□□□ 1.63
TRAPPC3-208ENST00000616074 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.22■■□□□ 1.63
TRAPPC3-208ENST00000616074 SOCS4Q8WXH5 440 aa25.22■■□□□ 1.63
TRAPPC3-208ENST00000616074 PRO3102Q9H379 93 aa25.22■■□□□ 1.63
TRAPPC3-208ENST00000616074 COG6Q9Y2V7 657 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms